YHR113W | aspartyl aminopeptidase

UniProt_ID: P38821

Computed_GO_Component_IDs: GO:0005737 GO:0005775 GO:0005773
Computed_GO_Components: cytoplasm vacuolar lumen vacuole
Computed_GO_Function_IDs: GO:0004177 GO:0016787 GO:0046872 GO:0008237 GO:0008233 GO:0008270
Computed_GO_Functions: aminopeptidase activity hydrolase activity metal ion binding metallopeptidase activity peptidase activity zinc ion binding
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs: GO:0005737 GO:0005576 GO:0000324 GO:0000328 GO:0005840
Curated_GO_Components: cytoplasm extracellular region fungal-type vacuole fungal-type vacuole lumen ribosome
Curated_GO_Function_IDs: GO:0004177 GO:0070006 GO:0043022
Curated_GO_Functions: aminopeptidase activity metalloaminopeptidase activity ribosome binding
Curated_GO_Processes: proteolysis

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	YHR113W	mTP	0.256623	0.000051	0.743326	CS pos: 9-10. RTM-SS. Pr: 0.4297

No Results

Fasta :-
>YHR113W MFRIQLRTMSSKTCKSDYPKEFVSFLNSSHSPYHTVHNIKKHLVSNGFKELSERDSWAGH VAQKGKYFVTRNGSSIIAFAVGGKWEPGNPIAITGAHTDSPALRIKPISKRVSEKYLQVG VETYGGAIWHSWFDKDLGVAGRVFVKDAKTGKSIARLVDLNRPLLKIPTLAIHLDRDVNQ KFEFNRETQLLPIGGLQEDKTEAKTEKEINNGEFTSIKTIVQRHHAELLGLIAKELAIDT IEDIEDFELILYDHNASTLGGFNDEFVFSGRLDNLTSCFTSMHGLTLAADTEIDRESGIR LMACFDHEEIGSSSAQGADSNFLPNILERLSILKGDGSDQTKPLFHSAILETSAKSFFLS SDVAHAVHPNYANKYESQHKPLLGGGPVIKINANQRYMTNSPGLVLVKRLAEAAKVPLQL FVVANDSPCGSTIGPILASKTGIRTLDLGNPVLSMHSIRETGGSADLEFQIKLFKEFFER YTSIESEIVV
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YHR113W.fa Sequence name : YHR113W Sequence length : 490 VALUES OF COMPUTED PARAMETERS Coef20 : 4.317 CoefTot : 0.347 ChDiff : -4 ZoneTo : 16 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.047 0.098 0.461 MesoH : -0.409 0.387 -0.310 0.217 MuHd_075 : 30.688 12.952 7.930 5.219 MuHd_095 : 25.161 9.378 4.423 5.409 MuHd_100 : 20.350 5.742 2.242 3.750 MuHd_105 : 13.613 1.601 1.544 2.488 Hmax_075 : 11.900 7.233 2.755 2.905 Hmax_095 : 3.325 4.112 0.088 2.065 Hmax_100 : 3.100 2.700 -1.438 1.630 Hmax_105 : 3.383 3.617 -0.424 1.412 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3525 0.6475 DFMC : 0.2878 0.7122 This protein is probably imported in mitochondria. f(Ser) = 0.1875 f(Arg) = 0.1250 CMi = 0.76531 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 490 YHR113W MFRIQLRTMSSKTCKSDYPKEFVSFLNSSHSPYHTVHNIKKHLVSNGFKELSERDSWAGHVAQKGKYFVTRNGSSIIAFA 80 VGGKWEPGNPIAITGAHTDSPALRIKPISKRVSEKYLQVGVETYGGAIWHSWFDKDLGVAGRVFVKDAKTGKSIARLVDL 160 NRPLLKIPTLAIHLDRDVNQKFEFNRETQLLPIGGLQEDKTEAKTEKEINNGEFTSIKTIVQRHHAELLGLIAKELAIDT 240 IEDIEDFELILYDHNASTLGGFNDEFVFSGRLDNLTSCFTSMHGLTLAADTEIDRESGIRLMACFDHEEIGSSSAQGADS 320 NFLPNILERLSILKGDGSDQTKPLFHSAILETSAKSFFLSSDVAHAVHPNYANKYESQHKPLLGGGPVIKINANQRYMTN 400 SPGLVLVKRLAEAAKVPLQLFVVANDSPCGSTIGPILASKTGIRTLDLGNPVLSMHSIRETGGSADLEFQIKLFKEFFER 480 YTSIESEIVV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YHR113W 3 ----MFR|IQ 0.074 . YHR113W 7 MFRIQLR|TM 0.093 . YHR113W 12 LRTMSSK|TC 0.063 . YHR113W 15 MSSKTCK|SD 0.163 . YHR113W 20 CKSDYPK|EF 0.069 . YHR113W 40 HTVHNIK|KH 0.058 . YHR113W 41 TVHNIKK|HL 0.117 . YHR113W 49 LVSNGFK|EL 0.070 . YHR113W 54 FKELSER|DS 0.119 . YHR113W 64 AGHVAQK|GK 0.071 . YHR113W 66 HVAQKGK|YF 0.074 . YHR113W 71 GKYFVTR|NG 0.131 . YHR113W 84 AFAVGGK|WE 0.056 . YHR113W 104 TDSPALR|IK 0.104 . YHR113W 106 SPALRIK|PI 0.084 . YHR113W 110 RIKPISK|RV 0.081 . YHR113W 111 IKPISKR|VS 0.252 . YHR113W 115 SKRVSEK|YL 0.101 . YHR113W 135 WHSWFDK|DL 0.150 . YHR113W 142 DLGVAGR|VF 0.079 . YHR113W 146 AGRVFVK|DA 0.094 . YHR113W 149 VFVKDAK|TG 0.057 . YHR113W 152 KDAKTGK|SI 0.092 . YHR113W 156 TGKSIAR|LV 0.140 . YHR113W 162 RLVDLNR|PL 0.085 . YHR113W 166 LNRPLLK|IP 0.062 . YHR113W 176 LAIHLDR|DV 0.203 . YHR113W 181 DRDVNQK|FE 0.077 . YHR113W 186 QKFEFNR|ET 0.084 . YHR113W 200 GGLQEDK|TE 0.057 . YHR113W 204 EDKTEAK|TE 0.063 . YHR113W 207 TEAKTEK|EI 0.107 . YHR113W 218 GEFTSIK|TI 0.065 . YHR113W 223 IKTIVQR|HH 0.092 . YHR113W 234 LLGLIAK|EL 0.059 . YHR113W 271 EFVFSGR|LD 0.065 . YHR113W 295 ADTEIDR|ES 0.079 . YHR113W 300 DRESGIR|LM 0.074 . YHR113W 329 LPNILER|LS 0.099 . YHR113W 334 ERLSILK|GD 0.065 . YHR113W 342 DGSDQTK|PL 0.072 . YHR113W 355 ILETSAK|SF 0.077 . YHR113W 374 HPNYANK|YE 0.086 . YHR113W 380 KYESQHK|PL 0.071 . YHR113W 390 GGGPVIK|IN 0.068 . YHR113W 396 KINANQR|YM 0.101 . YHR113W 408 PGLVLVK|RL 0.057 . YHR113W 409 GLVLVKR|LA 0.230 . YHR113W 415 RLAEAAK|VP 0.062 . YHR113W 440 GPILASK|TG 0.060 . YHR113W 444 ASKTGIR|TL 0.090 . YHR113W 459 LSMHSIR|ET 0.169 . YHR113W 472 DLEFQIK|LF 0.058 . YHR113W 475 FQIKLFK|EF 0.058 . YHR113W 480 FKEFFER|YT 0.104 . ____________________________^_________________

Fasta :-
>YHR113W ATGTTCAGGATACAACTGAGAACTATGTCCAGCAAAACATGCAAGAGTGATTACCCAAAG GAGTTTGTCAGTTTCTTAAATAGCTCACACTCTCCTTACCATACAGTTCATAACATCAAA AAGCATCTGGTGTCAAATGGCTTCAAAGAGTTGAGCGAACGTGACTCGTGGGCTGGCCAC GTCGCACAAAAAGGAAAGTACTTTGTGACAAGAAATGGCTCTTCCATTATTGCGTTTGCT GTTGGTGGAAAGTGGGAGCCTGGTAATCCAATTGCCATTACGGGTGCTCACACCGACTCC CCCGCATTAAGGATTAAGCCTATTTCTAAAAGAGTCAGTGAGAAGTATTTACAAGTGGGC GTGGAAACTTATGGTGGCGCTATTTGGCATTCATGGTTTGATAAGGATTTGGGCGTTGCC GGAAGAGTTTTCGTAAAGGATGCGAAAACTGGCAAATCCATTGCTAGATTGGTGGATTTG AATAGACCTCTGTTAAAGATTCCTACTTTGGCTATTCATCTGGACAGAGACGTAAATCAA AAATTCGAGTTTAATAGAGAAACTCAACTGTTGCCGATTGGTGGTCTGCAAGAAGACAAA ACTGAAGCGAAAACTGAAAAGGAAATTAATAACGGTGAGTTTACCTCCATAAAAACGATA GTACAGAGGCATCACGCAGAACTTTTGGGGCTAATAGCCAAAGAACTCGCCATTGATACA ATTGAAGACATTGAAGACTTCGAATTGATCCTTTATGATCATAATGCATCCACTCTAGGT GGGTTCAACGATGAGTTTGTCTTCTCTGGTCGATTGGATAATTTGACATCTTGTTTCACA TCAATGCACGGTTTAACGTTGGCGGCTGACACAGAAATTGACCGAGAATCAGGCATTAGA TTGATGGCATGCTTTGATCATGAGGAGATTGGCTCATCCTCCGCCCAAGGGGCAGATTCT AACTTCTTGCCTAATATATTGGAAAGGTTGTCCATCCTGAAGGGGGACGGTTCTGATCAA ACTAAACCTTTGTTTCACTCGGCAATATTGGAAACTTCCGCTAAGTCGTTTTTCCTTTCA TCTGATGTTGCTCATGCAGTTCATCCAAACTATGCAAACAAATACGAAAGCCAACACAAA CCCTTATTGGGTGGTGGTCCCGTAATCAAGATTAACGCGAATCAACGTTACATGACCAAT TCACCAGGGTTGGTCTTGGTGAAAAGACTAGCAGAGGCTGCTAAAGTCCCTTTGCAATTG TTTGTCGTAGCTAACGACTCACCATGCGGTTCTACCATCGGCCCCATTTTGGCCTCAAAG ACAGGTATTAGAACTCTAGACTTGGGTAATCCTGTGTTGAGTATGCATTCGATTAGAGAG ACCGGTGGCTCTGCAGACCTGGAGTTCCAAATCAAGTTATTTAAGGAATTTTTTGAACGC TACACTTCCATAGAATCTGAAATTGTTGTCTAA
Download Fasta

Fasta :-

MFRIQLRTMSSKTCKSDYPKEFVSFLNSSHSPYHTVHNIKKHLVSNGFKELSERDSWAGH VAQKGKYFVTRNGSSIIAFAVGGKWEPGNPIAITGAHTDSPALRIKPISKRVSEKYLQVG VETYGGAIWHSWFDKDLGVAGRVFVKDAKTGKSIARLVDLNRPLLKIPTLAIHLDRDVNQ KFEFNRETQLLPIGGLQEDKTEAKTEKEINNGEFTSIKTIVQRHHAELLGLIAKELAIDT IEDIEDFELILYDHNASTLGGFNDEFVFSGRLDNLTSCFTSMHGLTLAADTEIDRESGIR LMACFDHEEIGSSSAQGADSNFLPNILERLSILKGDGSDQTKPLFHSAILETSAKSFFLS SDVAHAVHPNYANKYESQHKPLLGGGPVIKINANQRYMTNSPGLVLVKRLAEAAKVPLQL FVVANDSPCGSTIGPILASKTGIRTLDLGNPVLSMHSIRETGGSADLEFQIKLFKEFFER YTSIESEIVV

Bacterial dinuclear zinc exopeptidases

title: metal binding site
coordinates: H97,D273,E308,E309,D362,H456

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	YHR113W	56 S	SERDSWAGH	0.992	unsp	YHR113W	56 S	SERDSWAGH	0.992	unsp	YHR113W	56 S	SERDSWAGH	0.992	unsp	YHR113W	109 S	IKPISKRVS	0.994	unsp	YHR113W	113 S	SKRVSEKYL	0.997	unsp	YHR113W	457 S	LSMHSIRET	0.993	unsp	YHR113W	483 S	ERYTSIESE	0.995	unsp	YHR113W	31 S	NSSHSPYHT	0.996	unsp	YHR113W	52 S	FKELSERDS	0.993	unsp

YHR113W | aspartyl aminopeptidase

ID's

UniProt_ID: P38821

GEO Functions

Computed_GO_Component_IDs: GO:0005737 GO:0005775 GO:0005773

Computed_GO_Components: cytoplasm vacuolar lumen vacuole

Computed_GO_Function_IDs: GO:0004177 GO:0016787 GO:0046872 GO:0008237 GO:0008233 GO:0008270

Computed_GO_Functions: aminopeptidase activity hydrolase activity metal ion binding metallopeptidase activity peptidase activity zinc ion binding

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs: GO:0005737 GO:0005576 GO:0000324 GO:0000328 GO:0005840

Curated_GO_Components: cytoplasm extracellular region fungal-type vacuole fungal-type vacuole lumen ribosome

Curated_GO_Function_IDs: GO:0004177 GO:0070006 GO:0043022

Curated_GO_Functions: aminopeptidase activity metalloaminopeptidase activity ribosome binding

Curated_GO_Processes: proteolysis

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Bacterial dinuclear zinc exopeptidases

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

YHR113W

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India