YHR200W | proteasome regulatory particle base subunit RPN10

_IDPredictionOTHERSPmTPCS_Position
YHR200WOTHER0.9998520.0001370.000011
No Results

  • Fasta :-

    >YHR200W MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR VLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD SRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVTPGPRL LYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSMEEEQ QRQERLRQQQQQQDQPEQSEQPEQHQDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YHR200W.fa Sequence name : YHR200W Sequence length : 268 VALUES OF COMPUTED PARAMETERS Coef20 : 3.726 CoefTot : 0.122 ChDiff : -17 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.571 0.924 -0.024 0.440 MesoH : -0.453 0.113 -0.359 0.223 MuHd_075 : 13.221 3.350 3.460 2.636 MuHd_095 : 13.443 7.048 3.390 0.028 MuHd_100 : 25.598 11.787 6.821 2.328 MuHd_105 : 32.205 13.736 8.685 3.753 Hmax_075 : 2.100 8.867 -0.855 3.827 Hmax_095 : 2.450 9.275 -0.118 1.951 Hmax_100 : 8.800 11.600 0.361 3.600 Hmax_105 : 13.500 14.400 2.715 4.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9818 0.0182 DFMC : 0.9711 0.0289
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 268 YHR200W MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQ 80 IEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAA 160 VNNPQEETSHLLTVTPGPRLLYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSMEEEQ 240 QRQERLRQQQQQQDQPEQSEQPEQHQDK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YHR200W 17 DNSEYSR|NG 0.080 . YHR200W 23 RNGDFPR|TR 0.108 . YHR200W 25 GDFPRTR|FE 0.108 . YHR200W 40 EFIFQAK|RN 0.070 . YHR200W 41 FIFQAKR|NS 0.133 . YHR200W 60 GAGANPR|VL 0.104 . YHR200W 71 FTAEFGK|IL 0.065 . YHR200W 84 DTQIEGK|LH 0.060 . YHR200W 99 IAQLTLK|HR 0.060 . YHR200W 101 QLTLKHR|QN 0.088 . YHR200W 104 LKHRQNK|VQ 0.178 . YHR200W 109 NKVQHQR|IV 0.111 . YHR200W 122 SPISDSR|DE 0.082 . YHR200W 127 SRDELIR|LA 0.090 . YHR200W 130 ELIRLAK|TL 0.125 . YHR200W 133 RLAKTLK|KN 0.067 . YHR200W 134 LAKTLKK|NN 0.084 . YHR200W 179 TVTPGPR|LL 0.079 . YHR200W 233 ELAMALR|LS 0.096 . YHR200W 242 MEEEQQR|QE 0.079 . YHR200W 245 EQQRQER|LR 0.266 . YHR200W 247 QRQERLR|QQ 0.155 . YHR200W 268 PEQHQDK|-- 0.075 . ____________________________^_________________

  • Fasta :-

    >YHR200W ATGGTATTGGAAGCTACAGTGTTAGTGATTGATAATTCAGAGTACTCTCGCAATGGCGAC TTTCCTAGGACAAGGTTTGAAGCCCAGATCGACTCGGTAGAGTTCATATTTCAAGCCAAG AGAAACAGCAATCCTGAGAATACAGTGGGTCTTATCTCTGGTGCTGGCGCCAACCCCAGG GTGTTATCTACGTTTACCGCCGAGTTTGGGAAGATTCTTGCTGGACTACACGACACGCAG ATCGAGGGTAAGCTGCATATGGCCACTGCGTTGCAGATCGCTCAGCTGACTTTGAAGCAT CGCCAGAATAAGGTCCAACATCAAAGGATTGTGGCATTTGTGTGTAGCCCAATAAGTGAT TCTCGAGACGAATTGATCAGATTGGCAAAAACACTGAAAAAGAATAATGTTGCCGTGGAC ATCATCAATTTTGGAGAGATTGAACAGAACACGGAGCTTTTGGATGAGTTCATAGCTGCA GTGAACAACCCTCAAGAAGAAACTAGTCATTTGCTTACTGTGACGCCTGGCCCCAGACTG CTGTACGAGAACATCGCATCTTCACCCATAATTCTCGAAGAAGGATCCTCCGGTATGGGC GCCTTTGGTGGGTCTGGCGGTGATTCCGATGCCAATGGCACATTTATGGACTTCGGGGTA GACCCATCAATGGACCCAGAACTGGCAATGGCCTTGCGTCTGTCTATGGAAGAAGAGCAG CAAAGACAGGAAAGGTTAAGACAGCAGCAACAACAACAAGATCAGCCTGAGCAGTCTGAA CAGCCTGAACAACACCAAGACAAATAG
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  • Fasta :-

    MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR VLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD SRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVTPGPRL LYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSMEEEQ QRQERLRQQQQQQDQPEQSEQPEQHQDK

  • title: partial signature motif
  • coordinates: D11,S13,T64
No Results
No Results
IDSitePeptideScoreMethod
YHR200W235 SALRLSMEEE0.997unsp

YHR200W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India