YIR022W | signal peptidase complex catalytic subunit SEC11

_IDPredictionOTHERSPmTPCS_Position
YIR022WSP0.2502940.7338000.015906CS pos: 30-31. AIA-TN. Pr: 0.4858
No Results

  • Fasta :-

    >YIR022W MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQFLLTKGDNNAGNDISLYANKKIYL NKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGLSALLGGE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YIR022W.fa Sequence name : YIR022W Sequence length : 167 VALUES OF COMPUTED PARAMETERS Coef20 : 4.574 CoefTot : 0.286 ChDiff : 4 ZoneTo : 45 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.841 1.624 0.231 0.683 MesoH : -0.026 0.620 -0.262 0.324 MuHd_075 : 17.878 15.155 4.413 5.999 MuHd_095 : 19.703 19.578 7.824 4.770 MuHd_100 : 18.813 20.029 8.238 4.936 MuHd_105 : 19.071 19.589 8.565 5.524 Hmax_075 : 9.200 16.100 4.247 5.580 Hmax_095 : 18.025 17.850 4.505 5.539 Hmax_100 : 16.600 18.500 4.992 6.520 Hmax_105 : 15.633 24.383 5.627 7.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7585 0.2415 DFMC : 0.6461 0.3539
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 167 YIR022W MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNRNTFNQVGDVVVYEVEGKQIP 80 IVHRVLRQHNNHADKQFLLTKGDNNAGNDISLYANKKIYLNKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGL 160 SALLGGE 240 ................................................................................ 80 ................................................................................ 160 ....... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YIR022W 4 ---MNLR|FE 0.084 . YIR022W 9 LRFELQK|LL 0.067 . YIR022W 51 MEPAFQR|GD 0.084 . YIR022W 60 ILFLWNR|NT 0.087 . YIR022W 77 VYEVEGK|QI 0.065 . YIR022W 84 QIPIVHR|VL 0.095 . YIR022W 87 IVHRVLR|QH 0.233 . YIR022W 95 HNNHADK|QF 0.061 . YIR022W 101 KQFLLTK|GD 0.070 . YIR022W 116 ISLYANK|KI 0.058 . YIR022W 117 SLYANKK|IY 0.080 . YIR022W 122 KKIYLNK|SK 0.112 . YIR022W 124 IYLNKSK|EI 0.064 . YIR022W 131 EIVGTVK|GY 0.074 . YIR022W 148 IWISENK|YA 0.076 . YIR022W 151 SENKYAK|FA 0.086 . ____________________________^_________________

  • Fasta :-

    >YIR022W ATGAATCTAAGATTTGAATTGCAGAAACTATTGAACGTTTGCTTTTTGTTTGCATCTGCT TACATGTTCTGGCAAGGCTTAGCCATTGCTACTAATAGCGCTTCTCCGATCGTGGTGGTG CTTTCAGGCTCCATGGAACCAGCTTTCCAAAGGGGTGATATCCTTTTCCTATGGAATAGA AATACTTTCAACCAAGTAGGTGATGTCGTGGTGTATGAGGTCGAAGGGAAACAAATCCCC ATTGTGCATAGAGTTTTGAGGCAACATAACAATCACGCGGACAAGCAATTCCTCCTGACC AAAGGTGACAATAACGCCGGCAATGATATCTCACTATATGCTAATAAGAAAATTTACTTG AACAAGTCAAAGGAGATTGTAGGGACCGTCAAGGGCTACTTTCCACAACTAGGGTACATT ACGATTTGGATTAGCGAGAACAAATATGCCAAGTTTGCATTGTTAGGTATGTTGGGGTTG AGTGCTCTGCTGGGGGGCGAGTAG
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  • Fasta :-

    MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQFLLTKGDNNAGNDISLYANKKIYL NKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGLSALLGGE

  • title: Catalytic site
  • coordinates: S44,H83
No Results
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YIR022W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India