_IDPredictionOTHERSPmTPCS_Position
YIR039CSP0.0002460.9997410.000013CS pos: 21-22. VLG-SS. Pr: 0.4445
No Results
  • Fasta :-

    >YIR039C MQLISILSLLSSLMCSLTVLGSSASSYVKFPVQKLADIINICTQDVSTVFKRNEVLNTTV INGIGVYVVKMEIGTPPQTLYLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTA TFNGLPSTTISSEAYNTLCSYWGTFDASNSSTFENNATFFNNTYGDGTYYAGTYGTDVVS FENITLNDFTFGVSNDTIGNPSGILGISLPIAEFTDGIEYALALNRTPFIYDNFPMELKN QGKINKIAYSLFLNGPDAHFGSILFGAVDKSKYTGQLYTLPMLQAFNTLGSNPGMIITAQ SVAILDSESGNKTVSDIQFPVMLDSGTTFSYLPTEIAEAIGKSFDGEYSSDDQGYIFDCS KVNDTLLSVDFGGFNISANISNFVTSAKDRCVLNVKQSESTYMLGDAFLVDAYVVYDLEN YEISIAQASFNNQEEDIEVISDTVPGATPAPGYFSTWVYKPGSPIGTGDFINVSWTSYSE FSQYKSLLATAAQSDDASSFSSSGGSSESTTKKQNAGYKYRSSFSFSLLSFISYFLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YIR039C.fa Sequence name : YIR039C Sequence length : 537 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : 1.070 ChDiff : -32 ZoneTo : 36 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.071 2.100 0.451 0.616 MesoH : 0.077 0.762 -0.165 0.297 MuHd_075 : 17.340 15.547 5.506 3.698 MuHd_095 : 19.115 19.888 6.594 6.310 MuHd_100 : 14.871 15.988 5.217 5.384 MuHd_105 : 14.777 20.267 4.453 6.169 Hmax_075 : 9.917 18.375 0.608 5.049 Hmax_095 : 13.650 16.600 2.855 5.460 Hmax_100 : 13.200 23.100 2.664 7.380 Hmax_105 : 14.700 23.188 1.557 6.842 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6770 0.3230 DFMC : 0.5113 0.4887
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 537 YIR039C MQLISILSLLSSLMCSLTVLGSSASSYVKFPVQKLADIINICTQDVSTVFKRNEVLNTTVINGIGVYVVKMEIGTPPQTL 80 YLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTATFNGLPSTTISSEAYNTLCSYWGTFDASNSSTFENNATFF 160 NNTYGDGTYYAGTYGTDVVSFENITLNDFTFGVSNDTIGNPSGILGISLPIAEFTDGIEYALALNRTPFIYDNFPMELKN 240 QGKINKIAYSLFLNGPDAHFGSILFGAVDKSKYTGQLYTLPMLQAFNTLGSNPGMIITAQSVAILDSESGNKTVSDIQFP 320 VMLDSGTTFSYLPTEIAEAIGKSFDGEYSSDDQGYIFDCSKVNDTLLSVDFGGFNISANISNFVTSAKDRCVLNVKQSES 400 TYMLGDAFLVDAYVVYDLENYEISIAQASFNNQEEDIEVISDTVPGATPAPGYFSTWVYKPGSPIGTGDFINVSWTSYSE 480 FSQYKSLLATAAQSDDASSFSSSGGSSESTTKKQNAGYKYRSSFSFSLLSFISYFLL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YIR039C 29 SASSYVK|FP 0.075 . YIR039C 34 VKFPVQK|LA 0.074 . YIR039C 51 DVSTVFK|RN 0.072 . YIR039C 52 VSTVFKR|NE 0.121 . YIR039C 70 IGVYVVK|ME 0.067 . YIR039C 102 ADIAYCK|SM 0.090 . YIR039C 226 YALALNR|TP 0.068 . YIR039C 239 NFPMELK|NQ 0.061 . YIR039C 243 ELKNQGK|IN 0.066 . YIR039C 246 NQGKINK|IA 0.068 . YIR039C 270 LFGAVDK|SK 0.090 . YIR039C 272 GAVDKSK|YT 0.088 . YIR039C 312 DSESGNK|TV 0.083 . YIR039C 342 IAEAIGK|SF 0.080 . YIR039C 361 YIFDCSK|VN 0.059 . YIR039C 388 NFVTSAK|DR 0.066 . YIR039C 390 VTSAKDR|CV 0.154 . YIR039C 396 RCVLNVK|QS 0.059 . YIR039C 460 FSTWVYK|PG 0.076 . YIR039C 485 SEFSQYK|SL 0.082 . YIR039C 512 SSESTTK|KQ 0.063 . YIR039C 513 SESTTKK|QN 0.113 . YIR039C 519 KQNAGYK|YR 0.070 . YIR039C 521 NAGYKYR|SS 0.125 . ____________________________^_________________
  • Fasta :-

    >YIR039C ATGCAATTGATTTCCATCCTCTCTTTGTTGTCATCATTGATGTGTTCATTGACCGTTTTA GGGTCTTCCGCAAGTTCCTATGTTAAGTTTCCTGTTCAAAAGTTGGCTGATATTATAAAT ATATGCACACAGGATGTTTCTACCGTCTTCAAAAGAAATGAGGTTCTTAACACCACAGTG ATAAATGGAATAGGAGTGTATGTTGTCAAGATGGAAATCGGAACGCCTCCACAAACGTTG TACCTACAGTTAGATACTGGCTCTTCAGATATGATTGTGAATAATGCTGACATTGCCTAT TGCAAATCGATGTCTGACGGATCTGACTACGCTTCAACTGATAATTACGAGCTCACAGCA ACGTTCAATGGGCTTCCTTCGACTACCATCTCATCAGAAGCTTATAACACTCTCTGCTCT TATTGGGGTACATTCGATGCAAGCAACTCATCTACTTTTGAGAATAATGCGACGTTTTTC AATAACACATACGGAGATGGTACGTATTATGCAGGGACTTATGGTACGGATGTTGTCTCT TTCGAAAATATTACTCTAAATGATTTCACTTTTGGTGTATCAAATGATACAATAGGCAAT CCAAGTGGCATTTTAGGCATATCGCTTCCCATTGCAGAATTTACAGATGGTATCGAATAC GCATTGGCATTGAACAGAACACCTTTCATATATGATAACTTTCCAATGGAATTAAAAAAT CAGGGAAAGATTAATAAAATAGCGTATTCTTTATTTTTGAATGGACCTGATGCACACTTC GGGAGCATCTTGTTTGGTGCAGTGGACAAAAGTAAGTACACAGGACAGCTTTACACCCTG CCTATGCTGCAGGCATTCAATACCCTTGGCTCAAATCCTGGGATGATTATTACTGCACAA AGTGTGGCAATTTTGGATAGTGAATCTGGCAATAAAACTGTTTCGGATATTCAATTTCCA GTGATGTTGGATTCTGGCACAACTTTCTCCTATTTACCCACCGAAATTGCAGAAGCAATC GGCAAAAGTTTTGACGGAGAGTACAGCTCTGACGACCAAGGCTACATCTTTGATTGTTCA AAAGTGAACGATACTTTACTGTCCGTCGACTTTGGAGGATTTAATATATCGGCAAACATA TCCAATTTCGTAACATCAGCTAAGGATCGTTGCGTTTTAAATGTTAAGCAATCCGAGTCC ACTTATATGCTGGGAGATGCTTTCCTTGTCGACGCATATGTAGTCTACGATTTAGAAAAC TACGAAATTTCTATTGCTCAGGCTAGCTTTAATAATCAAGAAGAAGATATTGAGGTTATC TCCGATACTGTCCCAGGTGCCACCCCTGCTCCCGGATACTTTAGTACATGGGTATATAAG CCCGGTAGTCCCATCGGAACAGGAGATTTTATTAATGTCAGCTGGACCTCGTATTCGGAA TTTTCACAGTACAAATCATTGCTTGCCACCGCAGCCCAAAGCGATGATGCTAGTTCTTTC TCAAGTAGTGGCGGCTCTAGCGAAAGCACCACTAAAAAACAAAATGCAGGTTACAAATAC CGTTCTTCTTTCTCCTTTTCATTATTGTCCTTCATATCTTATTTTCTTTTATAA
  • Download Fasta
  • Fasta :-

    MQLISILSLLSSLMCSLTVLGSSASSYVKFPVQKLADIINICTQDVSTVFKRNEVLNTTV INGIGVYVVKMEIGTPPQTLYLQLDTGSSDMIVNNADIAYCKSMSDGSDYASTDNYELTA TFNGLPSTTISSEAYNTLCSYWGTFDASNSSTFENNATFFNNTYGDGTYYAGTYGTDVVS FENITLNDFTFGVSNDTIGNPSGILGISLPIAEFTDGIEYALALNRTPFIYDNFPMELKN QGKINKIAYSLFLNGPDAHFGSILFGAVDKSKYTGQLYTLPMLQAFNTLGSNPGMIITAQ SVAILDSESGNKTVSDIQFPVMLDSGTTFSYLPTEIAEAIGKSFDGEYSSDDQGYIFDCS KVNDTLLSVDFGGFNISANISNFVTSAKDRCVLNVKQSESTYMLGDAFLVDAYVVYDLEN YEISIAQASFNNQEEDIEVISDTVPGATPAPGYFSTWVYKPGSPIGTGDFINVSWTSYSE FSQYKSLLATAAQSDDASSFSSSGGSSESTTKKQNAGYKYRSSFSFSLLSFISYFLL

  • title: catalytic residue
  • coordinates: D85,D324
IDSitePositionGscoreIscore
YIR039CT4560.5320.038
IDSitePositionGscoreIscore
YIR039CT4560.5320.038
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YIR039C386 SNFVTSAKDR0.996unspYIR039C506 SSSGGSSEST0.994unsp

YIR039C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India