YJL001W | proteasome core particle subunit beta 1

_IDPredictionOTHERSPmTPCS_Position
YJL001WOTHER0.9981240.0013110.000564
No Results

  • Fasta :-

    >YJL001W MNGIQVDINRLKKGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKI WCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAG YDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQ AIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YJL001W.fa Sequence name : YJL001W Sequence length : 215 VALUES OF COMPUTED PARAMETERS Coef20 : 3.473 CoefTot : -0.539 ChDiff : -4 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.235 1.653 0.228 0.504 MesoH : -0.739 0.113 -0.399 0.173 MuHd_075 : 4.755 2.817 1.254 1.407 MuHd_095 : 13.264 15.037 5.497 5.290 MuHd_100 : 17.769 16.971 6.666 6.051 MuHd_105 : 20.757 16.007 6.927 5.819 Hmax_075 : -2.600 5.833 -2.099 2.580 Hmax_095 : -2.000 11.500 -1.397 3.840 Hmax_100 : -1.800 11.500 -1.397 4.000 Hmax_105 : 7.000 14.600 1.181 5.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9962 0.0038 DFMC : 0.9974 0.0026
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 215 YJL001W MNGIQVDINRLKKGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQY 80 HLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKN 160 FRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL 240 ................................................................................ 80 ................................................................................ 160 ....................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YJL001W 10 IQVDINR|LK 0.076 . YJL001W 12 VDINRLK|KG 0.070 . YJL001W 13 DINRLKK|GE 0.232 . YJL001W 28 IMAVTFK|DG 0.075 . YJL001W 38 ILGADSR|TT 0.081 . YJL001W 48 GAYIANR|VT 0.099 . YJL001W 52 ANRVTDK|LT 0.071 . YJL001W 55 VTDKLTR|VH 0.074 . YJL001W 59 LTRVHDK|IW 0.068 . YJL001W 64 DKIWCCR|SG 0.153 . YJL001W 102 TAASVFK|EL 0.076 . YJL001W 109 ELCYENK|DN 0.074 . YJL001W 124 VAGYDDK|NK 0.067 . YJL001W 126 GYDDKNK|GE 0.058 . YJL001W 140 LGGSVHK|LP 0.065 . YJL001W 159 IYGYCDK|NF 0.059 . YJL001W 162 YCDKNFR|EN 0.090 . YJL001W 167 FRENMSK|EE 0.060 . YJL001W 175 ETVDFIK|HS 0.056 . YJL001W 183 SLSQAIK|WD 0.084 . YJL001W 193 SSGGVIR|MV 0.122 . YJL001W 204 TAAGVER|LI 0.095 . ____________________________^_________________

  • Fasta :-

    >YJL001W ATGAATGGAATTCAAGTGGACATCAATCGTTTGAAAAAGGGCGAAGTCAGTTTAGGTACC TCAATTATGGCCGTGACATTTAAGGATGGTGTGATACTAGGTGCTGATTCACGTACCACC ACTGGTGCGTACATAGCTAACCGTGTGACAGATAAATTAACGAGAGTACATGACAAAATT TGGTGTTGTAGGTCCGGTTCTGCAGCAGACACGCAGGCGATTGCCGACATTGTTCAGTAC CATTTGGAATTATATACTTCTCAATATGGTACCCCCTCCACAGAGACTGCTGCCTCGGTG TTCAAAGAATTATGTTACGAAAATAAAGATAACCTTACTGCTGGTATAATTGTGGCTGGT TATGATGACAAAAACAAAGGGGAAGTATATACTATTCCATTGGGTGGCTCCGTCCATAAG CTGCCTTATGCGATAGCAGGATCTGGCTCTACTTTCATATATGGGTATTGTGATAAAAAC TTTAGAGAAAATATGTCAAAGGAAGAAACCGTAGATTTCATAAAGCATTCGCTATCGCAA GCCATTAAATGGGACGGATCTTCCGGTGGTGTTATAAGAATGGTTGTTTTGACAGCTGCT GGTGTGGAACGTTTGATATTCTACCCTGATGAATATGAACAACTATAA
  • Download Fasta

  • Fasta :-

    MNGIQVDINRLKKGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKI WCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAG YDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQ AIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL

  • title: active site
  • coordinates: T20,D36,R38,K52,S148,D185,S188,G189
No Results
No Results
IDSitePeptideScoreMethod
YJL001W166 SRENMSKEET0.997unsp

YJL001W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India