_IDPredictionOTHERSPmTPCS_Position
YJR099WOTHER0.9999920.0000070.000001
No Results
  • Fasta :-

    >YJR099W MSGENRAVVPIESNPEVFTNFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFP INEDRKSSTSQQITSSYDVIWFKQSVKNACGLYAILHSLSNNQSLLEPGSDLDNFLKSQS DTSSSKNRFDDVTTDQFVLNVIKENVQTFSTGQSEAPEATADTNLHYITYVEENGGIFEL DGRNLSGPLYLGKSDPTATDLIEQELVRVRVASYMENANEEDVLNFAMLGLGPNWE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YJR099W.fa Sequence name : YJR099W Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.486 CoefTot : -0.138 ChDiff : -17 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.676 1.682 0.010 0.553 MesoH : -0.753 0.144 -0.450 0.170 MuHd_075 : 15.258 13.190 4.537 4.176 MuHd_095 : 11.980 3.425 3.683 2.793 MuHd_100 : 16.079 9.017 4.217 4.500 MuHd_105 : 19.779 13.074 4.078 5.393 Hmax_075 : 4.900 10.700 0.189 4.060 Hmax_095 : 4.200 7.800 -0.347 4.180 Hmax_100 : 7.000 10.100 0.107 4.340 Hmax_105 : 1.400 8.200 -1.645 3.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9948 0.0052 DFMC : 0.9943 0.0057
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 YJR099W MSGENRAVVPIESNPEVFTNFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFPINEDRKSSTSQQITSSYDVI 80 WFKQSVKNACGLYAILHSLSNNQSLLEPGSDLDNFLKSQSDTSSSKNRFDDVTTDQFVLNVIKENVQTFSTGQSEAPEAT 160 ADTNLHYITYVEENGGIFELDGRNLSGPLYLGKSDPTATDLIEQELVRVRVASYMENANEEDVLNFAMLGLGPNWE 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YJR099W 6 -MSGENR|AV 0.198 . YJR099W 24 FTNFAHK|LG 0.064 . YJR099W 28 AHKLGLK|NE 0.057 . YJR099W 50 LLAFLPR|PV 0.149 . YJR099W 53 FLPRPVK|AI 0.089 . YJR099W 65 FPINEDR|KS 0.104 . YJR099W 66 PINEDRK|SS 0.132 . YJR099W 83 YDVIWFK|QS 0.063 . YJR099W 87 WFKQSVK|NA 0.064 . YJR099W 117 DLDNFLK|SQ 0.075 . YJR099W 126 SDTSSSK|NR 0.062 . YJR099W 128 TSSSKNR|FD 0.220 . YJR099W 143 FVLNVIK|EN 0.058 . YJR099W 183 IFELDGR|NL 0.077 . YJR099W 193 GPLYLGK|SD 0.079 . YJR099W 208 IEQELVR|VR 0.069 . YJR099W 210 QELVRVR|VA 0.099 . ____________________________^_________________
  • Fasta :-

    >YJR099W ATGAGCGGAGAAAATCGTGCTGTGGTGCCGATTGAATCAAACCCTGAAGTTTTTACAAAT TTTGCACATAAATTAGGTTTAAAAAATGAATGGGCGTATTTCGATATCTATAGCTTAACA GAGCCAGAGTTACTAGCATTCTTACCAAGGCCAGTGAAGGCCATTGTGCTGCTATTTCCG ATAAACGAGGATAGAAAATCGAGTACCAGTCAACAAATTACAAGTTCTTATGATGTTATA TGGTTTAAGCAATCAGTCAAAAATGCGTGCGGATTGTATGCAATTCTTCATTCTTTGAGC AATAACCAGTCATTGTTGGAGCCCGGCTCCGACTTGGACAATTTTTTAAAATCTCAAAGT GATACTTCAAGCTCGAAGAATAGGTTTGATGATGTTACTACCGACCAATTCGTCTTGAAT GTAATAAAAGAGAATGTACAAACATTTTCTACTGGCCAGTCAGAAGCACCAGAAGCAACT GCAGATACTAATCTACACTATATCACATATGTGGAAGAGAACGGAGGGATATTTGAACTG GATGGAAGGAATTTGAGCGGACCCCTCTATTTGGGAAAGAGTGACCCAACTGCCACCGAT TTGATTGAACAGGAATTAGTTAGAGTGAGAGTCGCCTCATATATGGAAAATGCAAATGAA GAAGATGTATTAAACTTTGCTATGCTAGGATTGGGCCCTAATTGGGAATAA
  • Download Fasta
  • Fasta :-

    MSGENRAVVPIESNPEVFTNFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFP INEDRKSSTSQQITSSYDVIWFKQSVKNACGLYAILHSLSNNQSLLEPGSDLDNFLKSQS DTSSSKNRFDDVTTDQFVLNVIKENVQTFSTGQSEAPEATADTNLHYITYVEENGGIFEL DGRNLSGPLYLGKSDPTATDLIEQELVRVRVASYMENANEEDVLNFAMLGLGPNWE

  • title: catalytic site
  • coordinates: Q84,C90,H166,D181
IDSitePositionGscoreIscore
YJR099WS20.5260.049
IDSitePositionGscoreIscore
YJR099WS20.5260.049
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YJR099W123 SQSDTSSSKN0.992unspYJR099W123 SQSDTSSSKN0.992unspYJR099W123 SQSDTSSSKN0.992unspYJR099W213 SVRVASYMEN0.996unspYJR099W68 SDRKSSTSQQ0.993unspYJR099W118 SNFLKSQSDT0.996unsp

YJR099W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India