YKR038C | chromatin DNA-binding HSP70/DnaK family ATPase

_IDPredictionOTHERSPmTPCS_Position
YKR038COTHER0.9993710.0005150.000113
No Results

  • Fasta :-

    >YKR038C MVNLNTIPPKNGRDYYIALGLEGSANKLGVGIVKHPLLPKHANSDLSYDCEAEMLSNIRD TYVTPPGEGFLPRDTARHHRNWCIRLIKQALAEADIKSPTLDIDVICFTKGPGMGAPLHS VVIAARTCSLLWDVPLVGVNHCIGHIEMGREITKAQNPVVLYVSGGNTQVIAYSEKRYRI FGETLDIAIGNCLDRFARTLKIPNEPSPGYNIEQLAKKAPHKENLVELPYTVKGMDLSMS GILASIDLLAKDLFKGNKKNKILFDKTTGEQKVTVEDLCYSLQENLFAMLVEITERAMAH VNSNQVLIVGGVGCNVRLQEMMAQMCKDRANGQVHATDNRFCIDNGVMIAQAGLLEYRMG GIVKDFSETVVTQKFRTDEVYAAWRD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YKR038C.fa Sequence name : YKR038C Sequence length : 386 VALUES OF COMPUTED PARAMETERS Coef20 : 3.270 CoefTot : -1.014 ChDiff : -1 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.847 1.576 0.087 0.535 MesoH : -0.116 0.593 -0.220 0.293 MuHd_075 : 22.226 15.413 6.440 4.997 MuHd_095 : 18.870 1.893 4.337 3.236 MuHd_100 : 20.846 4.811 4.267 3.830 MuHd_105 : 20.163 8.675 3.927 4.263 Hmax_075 : 7.788 8.050 0.439 3.980 Hmax_095 : 1.300 2.975 -1.457 2.840 Hmax_100 : 5.200 5.600 -0.828 3.360 Hmax_105 : 1.100 9.500 -1.323 3.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9837 0.0163 DFMC : 0.9767 0.0233
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 386 YKR038C MVNLNTIPPKNGRDYYIALGLEGSANKLGVGIVKHPLLPKHANSDLSYDCEAEMLSNIRDTYVTPPGEGFLPRDTARHHR 80 NWCIRLIKQALAEADIKSPTLDIDVICFTKGPGMGAPLHSVVIAARTCSLLWDVPLVGVNHCIGHIEMGREITKAQNPVV 160 LYVSGGNTQVIAYSEKRYRIFGETLDIAIGNCLDRFARTLKIPNEPSPGYNIEQLAKKAPHKENLVELPYTVKGMDLSMS 240 GILASIDLLAKDLFKGNKKNKILFDKTTGEQKVTVEDLCYSLQENLFAMLVEITERAMAHVNSNQVLIVGGVGCNVRLQE 320 MMAQMCKDRANGQVHATDNRFCIDNGVMIAQAGLLEYRMGGIVKDFSETVVTQKFRTDEVYAAWRD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YKR038C 10 LNTIPPK|NG 0.065 . YKR038C 13 IPPKNGR|DY 0.135 . YKR038C 27 LEGSANK|LG 0.059 . YKR038C 34 LGVGIVK|HP 0.056 . YKR038C 40 KHPLLPK|HA 0.065 . YKR038C 59 EMLSNIR|DT 0.094 . YKR038C 73 GEGFLPR|DT 0.145 . YKR038C 77 LPRDTAR|HH 0.103 . YKR038C 80 DTARHHR|NW 0.283 . YKR038C 85 HRNWCIR|LI 0.163 . YKR038C 88 WCIRLIK|QA 0.136 . YKR038C 97 LAEADIK|SP 0.067 . YKR038C 110 DVICFTK|GP 0.068 . YKR038C 126 SVVIAAR|TC 0.080 . YKR038C 150 GHIEMGR|EI 0.102 . YKR038C 154 MGREITK|AQ 0.067 . YKR038C 176 VIAYSEK|RY 0.066 . YKR038C 177 IAYSEKR|YR 0.184 . YKR038C 179 YSEKRYR|IF 0.120 . YKR038C 195 IGNCLDR|FA 0.103 . YKR038C 198 CLDRFAR|TL 0.183 . YKR038C 201 RFARTLK|IP 0.091 . YKR038C 217 NIEQLAK|KA 0.070 . YKR038C 218 IEQLAKK|AP 0.104 . YKR038C 222 AKKAPHK|EN 0.068 . YKR038C 233 ELPYTVK|GM 0.062 . YKR038C 251 SIDLLAK|DL 0.072 . YKR038C 255 LAKDLFK|GN 0.062 . YKR038C 258 DLFKGNK|KN 0.059 . YKR038C 259 LFKGNKK|NK 0.075 . YKR038C 261 KGNKKNK|IL 0.095 . YKR038C 266 NKILFDK|TT 0.081 . YKR038C 272 KTTGEQK|VT 0.056 . YKR038C 296 LVEITER|AM 0.079 . YKR038C 317 GVGCNVR|LQ 0.079 . YKR038C 327 MMAQMCK|DR 0.073 . YKR038C 329 AQMCKDR|AN 0.158 . YKR038C 340 VHATDNR|FC 0.107 . YKR038C 358 AGLLEYR|MG 0.087 . YKR038C 364 RMGGIVK|DF 0.082 . YKR038C 374 ETVVTQK|FR 0.067 . YKR038C 376 VVTQKFR|TD 0.086 . YKR038C 385 EVYAAWR|D- 0.098 . ____________________________^_________________

  • Fasta :-

    >YKR038C ATGGTCAACTTGAACACTATCCCACCCAAAAATGGCAGGGACTACTACATTGCGCTTGGA CTTGAAGGTTCTGCAAATAAACTGGGCGTTGGTATAGTTAAGCATCCGCTTCTGCCTAAA CATGCCAACAGCGATCTATCTTATGATTGCGAAGCTGAGATGCTTTCTAATATTAGAGAC ACATATGTCACACCTCCTGGGGAGGGATTTTTGCCTCGAGACACGGCAAGGCATCACAGA AATTGGTGCATAAGACTCATAAAACAAGCACTGGCCGAAGCTGACATCAAAAGCCCGACA CTAGACATTGATGTAATTTGCTTTACCAAAGGTCCCGGCATGGGGGCCCCTCTGCATTCA GTTGTCATCGCCGCCAGAACGTGCTCCTTACTGTGGGACGTGCCACTGGTGGGAGTAAAC CACTGCATTGGTCACATCGAAATGGGGAGAGAAATCACTAAAGCTCAAAATCCTGTGGTA CTGTATGTAAGTGGTGGAAATACACAAGTTATTGCATACTCGGAAAAAAGGTACCGTATC TTTGGTGAAACGCTTGATATTGCTATCGGTAATTGTCTTGATAGATTTGCAAGAACTCTG AAGATACCTAATGAGCCCTCGCCTGGCTACAACATCGAGCAGTTAGCTAAAAAAGCCCCT CACAAAGAAAACTTGGTAGAACTTCCCTATACAGTAAAGGGGATGGATCTTTCGATGAGT GGTATATTGGCTTCCATCGATTTACTTGCCAAGGATCTATTTAAGGGCAATAAGAAAAAT AAGATCCTATTCGACAAGACAACGGGCGAGCAAAAAGTCACTGTAGAGGATCTTTGCTAC TCTCTGCAAGAGAACCTATTCGCCATGCTAGTTGAAATAACAGAAAGAGCTATGGCTCAC GTTAACTCCAATCAAGTTTTGATCGTAGGCGGTGTTGGTTGTAACGTGCGATTACAAGAA ATGATGGCGCAAATGTGTAAAGACAGGGCCAATGGGCAAGTACATGCTACAGATAATAGG TTTTGTATCGATAACGGAGTTATGATTGCCCAAGCAGGACTACTAGAGTATAGAATGGGT GGGATCGTGAAGGACTTTTCTGAAACTGTTGTTACGCAGAAATTCAGAACCGATGAAGTA TACGCAGCCTGGCGTGATTAA
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  • Fasta :-

    MVNLNTIPPKNGRDYYIALGLEGSANKLGVGIVKHPLLPKHANSDLSYDCEAEMLSNIRD TYVTPPGEGFLPRDTARHHRNWCIRLIKQALAEADIKSPTLDIDVICFTKGPGMGAPLHS VVIAARTCSLLWDVPLVGVNHCIGHIEMGREITKAQNPVVLYVSGGNTQVIAYSEKRYRI FGETLDIAIGNCLDRFARTLKIPNEPSPGYNIEQLAKKAPHKENLVELPYTVKGMDLSMS GILASIDLLAKDLFKGNKKNKILFDKTTGEQKVTVEDLCYSLQENLFAMLVEITERAMAH VNSNQVLIVGGVGCNVRLQEMMAQMCKDRANGQVHATDNRFCIDNGVMIAQAGLLEYRMG GIVKDFSETVVTQKFRTDEVYAAWRD

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YKR038C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India