YKR087C | metalloendopeptidase

_IDPredictionOTHERSPmTPCS_Position
YKR087CmTP0.2361770.0000990.763724CS pos: 33-34. RCY-RY. Pr: 0.3518
No Results

  • Fasta :-

    >YKR087C MLRNIIRFKGFGKGTSGGFLKPVSFRVQLTRCYRYDNGPSYRRFNNGEYSQKSSFKSILL DKSSRKYLALLFGGCSLFYYTHLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQE ILPPQHPLSIKIENIFMKIVEAAYKDPSVDNSLLDGIKWEIHVVNDPTASPNAFVLPGGK VFIFSSILPICANDDGIATVLAHEFAHQLARHTAENLSKAPIYSLLGLVLYTVTGAHAIN NILLDGFLRMPASRQMETEADYIGLMIMSRACFQPQESIKVWERMANFEKQMNRGGVVNM EFLSTHPASTRRIENMSKWLPKANEIYEQSDCSSMGNYYKSFFSM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YKR087C.fa Sequence name : YKR087C Sequence length : 345 VALUES OF COMPUTED PARAMETERS Coef20 : 3.849 CoefTot : -1.180 ChDiff : 10 ZoneTo : 35 KR : 8 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 1.671 0.261 0.679 MesoH : 0.084 0.712 -0.221 0.361 MuHd_075 : 36.698 22.230 9.957 8.149 MuHd_095 : 31.110 18.888 8.806 6.319 MuHd_100 : 25.611 15.414 6.137 5.519 MuHd_105 : 34.816 18.896 7.279 7.680 Hmax_075 : 16.000 17.300 3.496 4.320 Hmax_095 : 16.887 12.688 2.260 5.294 Hmax_100 : 15.700 9.900 1.628 5.250 Hmax_105 : 6.400 12.400 2.685 5.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0425 0.9575 DFMC : 0.0720 0.9280 This protein is probably imported in mitochondria. f(Ser) = 0.0571 f(Arg) = 0.1429 CMi = 0.21164 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 345 YKR087C MLRNIIRFKGFGKGTSGGFLKPVSFRVQLTRCYRYDNGPSYRRFNNGEYSQKSSFKSILLDKSSRKYLALLFGGCSLFYY 80 THLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKIENIFMKIVEAAYKDPSVDNSLLDGIKWE 160 IHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQLARHTAENLSKAPIYSLLGLVLYTVTGAHAIN 240 NILLDGFLRMPASRQMETEADYIGLMIMSRACFQPQESIKVWERMANFEKQMNRGGVVNMEFLSTHPASTRRIENMSKWL 320 PKANEIYEQSDCSSMGNYYKSFFSM 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YKR087C 3 ----MLR|NI 0.077 . YKR087C 7 MLRNIIR|FK 0.140 . YKR087C 9 RNIIRFK|GF 0.097 . YKR087C 13 RFKGFGK|GT 0.083 . YKR087C 21 TSGGFLK|PV 0.084 . YKR087C 26 LKPVSFR|VQ 0.069 . YKR087C 31 FRVQLTR|CY 0.085 . YKR087C 34 QLTRCYR|YD 0.132 . YKR087C 42 DNGPSYR|RF 0.111 . YKR087C 43 NGPSYRR|FN 0.118 . YKR087C 52 NGEYSQK|SS 0.079 . YKR087C 56 SQKSSFK|SI 0.083 . YKR087C 62 KSILLDK|SS 0.086 . YKR087C 65 LLDKSSR|KY 0.084 . YKR087C 66 LDKSSRK|YL 0.085 . YKR087C 85 YYTHLDK|AP 0.052 . YKR087C 91 KAPVSDR|SR 0.111 . YKR087C 93 PVSDRSR|FI 0.128 . YKR087C 99 RFIWVSR|PL 0.095 . YKR087C 111 IGNYTYK|SI 0.117 . YKR087C 115 TYKSIWR|QT 0.101 . YKR087C 131 QHPLSIK|IE 0.060 . YKR087C 138 IENIFMK|IV 0.124 . YKR087C 145 IVEAAYK|DP 0.065 . YKR087C 158 SLLDGIK|WE 0.060 . YKR087C 180 FVLPGGK|VF 0.049 . YKR087C 211 FAHQLAR|HT 0.110 . YKR087C 219 TAENLSK|AP 0.069 . YKR087C 249 LLDGFLR|MP 0.072 . YKR087C 254 LRMPASR|QM 0.124 . YKR087C 270 GLMIMSR|AC 0.097 . YKR087C 280 QPQESIK|VW 0.072 . YKR087C 284 SIKVWER|MA 0.104 . YKR087C 290 RMANFEK|QM 0.072 . YKR087C 294 FEKQMNR|GG 0.080 . YKR087C 311 THPASTR|RI 0.094 . YKR087C 312 HPASTRR|IE 0.142 . YKR087C 318 RIENMSK|WL 0.065 . YKR087C 322 MSKWLPK|AN 0.093 . YKR087C 340 SMGNYYK|SF 0.086 . ____________________________^_________________

  • Fasta :-

    >YKR087C ATGTTACGCAACATCATCAGGTTCAAAGGATTTGGAAAAGGGACCAGTGGAGGATTTTTA AAACCTGTATCATTTCGTGTTCAGTTAACGCGATGTTACCGCTATGACAATGGTCCTTCA TATCGTCGATTTAATAATGGAGAGTATTCCCAAAAATCATCGTTTAAAAGCATTCTTCTC GATAAGTCATCAAGAAAATACTTAGCTTTATTATTTGGTGGATGCTCTCTCTTTTATTAT ACACATTTGGATAAAGCACCGGTAAGCGATAGGTCCAGGTTCATCTGGGTATCGCGTCCA TTAGAGTTAACTATCGGAAATTACACATACAAATCAATTTGGAGACAAACGCAGCAGGAA ATATTACCTCCACAGCATCCGCTGTCCATCAAAATTGAGAATATTTTCATGAAAATTGTC GAAGCTGCTTATAAGGACCCTAGTGTAGACAACTCACTACTGGACGGAATCAAGTGGGAA ATTCATGTGGTCAATGATCCAACTGCTTCACCAAATGCATTCGTTTTACCAGGGGGTAAG GTCTTTATATTCAGCTCTATTTTACCTATTTGTGCTAATGATGATGGGATTGCCACTGTT TTAGCACACGAATTTGCTCATCAGCTAGCAAGACACACAGCCGAAAATTTGTCGAAGGCT CCTATATATTCTCTTTTGGGTTTGGTGTTATATACTGTTACTGGAGCTCATGCTATCAAC AATATACTATTGGATGGGTTTTTGCGAATGCCAGCATCAAGACAGATGGAAACCGAAGCT GATTACATTGGCCTGATGATAATGTCAAGGGCATGTTTTCAACCACAGGAGTCAATAAAA GTGTGGGAAAGAATGGCAAATTTTGAAAAGCAAATGAATAGAGGGGGTGTTGTGAATATG GAGTTTCTAAGTACACATCCAGCAAGCACTCGTAGAATAGAGAATATGTCGAAATGGTTG CCAAAAGCTAATGAAATTTATGAACAATCTGATTGTAGCAGTATGGGTAACTATTATAAA AGTTTTTTCTCAATGTAA
  • Download Fasta

  • Fasta :-

    MLRNIIRFKGFGKGTSGGFLKPVSFRVQLTRCYRYDNGPSYRRFNNGEYSQKSSFKSILL DKSSRKYLALLFGGCSLFYYTHLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQE ILPPQHPLSIKIENIFMKIVEAAYKDPSVDNSLLDGIKWEIHVVNDPTASPNAFVLPGGK VFIFSSILPICANDDGIATVLAHEFAHQLARHTAENLSKAPIYSLLGLVLYTVTGAHAIN NILLDGFLRMPASRQMETEADYIGLMIMSRACFQPQESIKVWERMANFEKQMNRGGVVNM EFLSTHPASTRRIENMSKWLPKANEIYEQSDCSSMGNYYKSFFSM

    No Results
  • title: Zn binding site
  • coordinates: H203,H207,E257,H306
No Results
No Results
IDSitePeptideScoreMethod
YKR087C309 STHPASTRRI0.996unsp

YKR087C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India