Loading, please wait...
_ID
Prediction
OTHER
SP
mTP
CS_Position
YLR299W SP 0.094684 0.897575 0.007741 CS pos: 32-33. VSG-MP. Pr: 0.8676
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >YLR299W MLLCNRKVPKTLNTCFILHIFTLLTLGVLVSGMPSKMVSFASQETLQRINNLLRGSANRD VDIIAEYLKKDDDDDGGDKDHHNIDIDPLPRRPSLTPDRQLLKVGLHGAISSDLEVCSNL TINEVLLKFPGSNAADAAVTQALCKGMVNFFNSGIGGGGYVVFSGKDDEDHLSIDFREKA PMDSHKFMFENCSLCSKIGGLAVGVPGELMGLYRLFKERGSGQVDWRDLIEPVAKLGSVG WQIGEALGATLELYEDVFLTLKEDWSFVLNSTHDGVLKEGDWIKRPALSNMLMELAKNGS VAPFYDPDHWIAKSMIDTVAKYNGIMNLQDVSSYDVHVTKPLSMKIRKGANFIPDNDMTV LTSSGSSSGAALLAALRIMDNFQNQEGGDYEKETTYHLLESMKWMASARSRLGDFEGEAL PKHIEEVLDPEWALKAVKSIKRNSQDGNFKTLENWTLYDPAYDINNPHGTAHFSIVDSHG NAVSLTTTINLLFGSLVHDPKTGVIFNNEMDDFAQFNKSNSFELAPSIYNFPEPGKRPLS STAPTIVLSELGIPDLVVGASGGSRITTSVLQTIVRTYWYNMPILETIAYPRIHHQLLPD RIELESFPMIGKAVLSTLKEMGYTMKEVFPKSVVNAIRNVRGEWHAVSDYWRKRGISSVY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YLR299W.fa Sequence name : YLR299W Sequence length : 660 VALUES OF COMPUTED PARAMETERS Coef20 : 4.357 CoefTot : -0.323 ChDiff : -17 ZoneTo : 59 KR : 7 DE : 1 CleavSite : 56 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.282 0.405 0.775 MesoH : -0.136 0.477 -0.249 0.279 MuHd_075 : 31.847 23.877 6.512 7.426 MuHd_095 : 44.041 29.640 12.841 9.105 MuHd_100 : 44.340 29.347 13.079 8.790 MuHd_105 : 44.385 26.712 12.588 8.568 Hmax_075 : -2.450 19.100 -3.260 5.310 Hmax_095 : 12.700 11.600 2.163 3.810 Hmax_100 : 13.900 13.600 2.519 4.290 Hmax_105 : 14.817 16.683 3.036 5.063 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2194 0.7806 DFMC : 0.1489 0.8511 This protein is probably imported in mitochondria. f(Ser) = 0.0847 f(Arg) = 0.0678 CMi = 0.51387 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 660 YLR299W MLLCNRKVPKTLNTCFILHIFTLLTLGVLVSGMPSKMVSFASQETLQRINNLLRGSANRDVDIIAEYLKKDDDDDGGDKD 80 HHNIDIDPLPRRPSLTPDRQLLKVGLHGAISSDLEVCSNLTINEVLLKFPGSNAADAAVTQALCKGMVNFFNSGIGGGGY 160 VVFSGKDDEDHLSIDFREKAPMDSHKFMFENCSLCSKIGGLAVGVPGELMGLYRLFKERGSGQVDWRDLIEPVAKLGSVG 240 WQIGEALGATLELYEDVFLTLKEDWSFVLNSTHDGVLKEGDWIKRPALSNMLMELAKNGSVAPFYDPDHWIAKSMIDTVA 320 KYNGIMNLQDVSSYDVHVTKPLSMKIRKGANFIPDNDMTVLTSSGSSSGAALLAALRIMDNFQNQEGGDYEKETTYHLLE 400 SMKWMASARSRLGDFEGEALPKHIEEVLDPEWALKAVKSIKRNSQDGNFKTLENWTLYDPAYDINNPHGTAHFSIVDSHG 480 NAVSLTTTINLLFGSLVHDPKTGVIFNNEMDDFAQFNKSNSFELAPSIYNFPEPGKRPLSSTAPTIVLSELGIPDLVVGA 560 SGGSRITTSVLQTIVRTYWYNMPILETIAYPRIHHQLLPDRIELESFPMIGKAVLSTLKEMGYTMKEVFPKSVVNAIRNV 640 RGEWHAVSDYWRKRGISSVY 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YLR299W 6 -MLLCNR|KV 0.090 . YLR299W 7 MLLCNRK|VP 0.064 . YLR299W 10 CNRKVPK|TL 0.079 . YLR299W 36 VSGMPSK|MV 0.085 . YLR299W 48 SQETLQR|IN 0.077 . YLR299W 54 RINNLLR|GS 0.084 . YLR299W 59 LRGSANR|DV 0.242 . YLR299W 69 IIAEYLK|KD 0.060 . YLR299W 70 IAEYLKK|DD 0.129 . YLR299W 79 DDDGGDK|DH 0.059 . YLR299W 91 DIDPLPR|RP 0.065 . YLR299W 92 IDPLPRR|PS 0.102 . YLR299W 99 PSLTPDR|QL 0.091 . YLR299W 103 PDRQLLK|VG 0.056 . YLR299W 128 INEVLLK|FP 0.065 . YLR299W 145 VTQALCK|GM 0.061 . YLR299W 166 YVVFSGK|DD 0.079 . YLR299W 177 HLSIDFR|EK 0.114 . YLR299W 179 SIDFREK|AP 0.065 . YLR299W 186 APMDSHK|FM 0.078 . YLR299W 197 NCSLCSK|IG 0.069 . YLR299W 214 ELMGLYR|LF 0.084 . YLR299W 217 GLYRLFK|ER 0.160 . YLR299W 219 YRLFKER|GS 0.149 . YLR299W 227 SGQVDWR|DL 0.112 . YLR299W 235 LIEPVAK|LG 0.068 . YLR299W 262 DVFLTLK|ED 0.052 . YLR299W 278 THDGVLK|EG 0.063 . YLR299W 284 KEGDWIK|RP 0.057 . YLR299W 285 EGDWIKR|PA 0.144 . YLR299W 297 MLMELAK|NG 0.069 . YLR299W 313 PDHWIAK|SM 0.094 . YLR299W 321 MIDTVAK|YN 0.081 . YLR299W 340 YDVHVTK|PL 0.078 . YLR299W 345 TKPLSMK|IR 0.065 . YLR299W 347 PLSMKIR|KG 0.110 . YLR299W 348 LSMKIRK|GA 0.117 . YLR299W 377 ALLAALR|IM 0.073 . YLR299W 392 EGGDYEK|ET 0.061 . YLR299W 403 HLLESMK|WM 0.062 . YLR299W 409 KWMASAR|SR 0.140 . YLR299W 411 MASARSR|LG 0.114 . YLR299W 422 EGEALPK|HI 0.080 . YLR299W 435 DPEWALK|AV 0.074 . YLR299W 438 WALKAVK|SI 0.070 . YLR299W 441 KAVKSIK|RN 0.074 . YLR299W 442 AVKSIKR|NS 0.151 . YLR299W 450 SQDGNFK|TL 0.061 . YLR299W 501 SLVHDPK|TG 0.059 . YLR299W 518 DFAQFNK|SN 0.084 . YLR299W 536 NFPEPGK|RP 0.052 . YLR299W 537 FPEPGKR|PL 0.174 . YLR299W 565 GASGGSR|IT 0.118 . YLR299W 576 VLQTIVR|TY 0.081 . YLR299W 592 ETIAYPR|IH 0.095 . YLR299W 601 HQLLPDR|IE 0.082 . YLR299W 612 SFPMIGK|AV 0.067 . YLR299W 619 AVLSTLK|EM 0.057 . YLR299W 626 EMGYTMK|EV 0.079 . YLR299W 631 MKEVFPK|SV 0.147 . YLR299W 638 SVVNAIR|NV 0.173 . YLR299W 641 NAIRNVR|GE 0.205 . YLR299W 652 AVSDYWR|KR 0.098 . YLR299W 653 VSDYWRK|RG 0.068 . YLR299W 654 SDYWRKR|GI 0.307 . ____________________________^_________________
  • Fasta :-

    >YLR299W ATGCTGTTGTGTAATAGAAAAGTCCCCAAGACTTTAAATACCTGTTTTATACTGCATATA TTCACTCTGTTAACACTGGGTGTGTTAGTGTCCGGAATGCCGTCAAAAATGGTATCATTC GCCTCTCAGGAGACTTTGCAGAGAATAAATAATCTCCTTCGAGGGTCTGCCAATCGAGAT GTTGACATTATTGCAGAATATTTGAAAAAAGACGACGATGATGATGGCGGCGATAAGGAT CACCATAACATCGATATTGACCCTTTACCTCGCCGTCCTAGTTTAACGCCTGATAGGCAA CTTCTAAAAGTCGGTTTGCATGGTGCTATAAGTTCAGATTTAGAAGTCTGTAGTAATTTG ACTATAAATGAGGTACTCCTGAAATTTCCCGGTTCTAACGCTGCAGACGCTGCAGTAACA CAAGCTCTTTGTAAGGGTATGGTGAATTTTTTTAATAGTGGGATTGGAGGTGGTGGCTAC GTAGTTTTTTCTGGCAAAGACGATGAAGATCATCTATCCATTGATTTTAGAGAAAAAGCA CCCATGGATTCACATAAGTTCATGTTCGAAAACTGCTCTCTATGCTCAAAAATAGGGGGT CTTGCTGTCGGTGTTCCAGGTGAATTGATGGGTCTCTATCGCCTCTTTAAAGAAAGAGGT AGCGGCCAAGTTGATTGGCGTGATCTAATTGAACCAGTCGCAAAGCTGGGAAGCGTGGGT TGGCAAATAGGCGAAGCACTCGGTGCCACTTTAGAACTTTATGAGGATGTTTTCCTGACA TTGAAGGAAGATTGGTCGTTTGTATTGAATTCTACCCATGACGGTGTTTTGAAAGAAGGC GATTGGATCAAGAGGCCGGCACTATCTAACATGCTAATGGAACTGGCTAAAAATGGTTCC GTGGCCCCATTTTATGACCCCGATCACTGGATTGCAAAATCCATGATTGATACTGTCGCA AAATACAATGGAATAATGAACTTGCAGGATGTTTCATCGTATGATGTTCATGTTACTAAA CCACTGTCCATGAAAATTAGGAAGGGCGCCAATTTCATCCCTGATAACGATATGACCGTA TTAACAAGTAGCGGCTCAAGTTCCGGGGCTGCACTACTTGCGGCGTTAAGGATAATGGAT AATTTCCAGAATCAAGAAGGGGGCGATTATGAAAAAGAAACTACCTATCATTTGCTTGAA AGCATGAAATGGATGGCAAGCGCAAGAAGCAGGTTAGGCGATTTTGAAGGCGAAGCATTA CCTAAGCATATAGAAGAGGTATTGGATCCAGAATGGGCTTTGAAAGCAGTGAAATCAATC AAAAGAAACTCTCAAGACGGAAATTTTAAAACTTTAGAAAACTGGACGCTTTATGATCCG GCATACGATATCAATAACCCGCATGGAACTGCCCACTTCAGTATAGTAGATTCACATGGG AATGCTGTTTCCTTGACAACCACCATCAACTTGTTGTTCGGTTCCTTAGTACACGACCCA AAAACCGGGGTGATCTTCAATAATGAAATGGACGATTTCGCTCAATTCAACAAATCTAAT AGTTTTGAATTGGCACCCTCCATATACAACTTTCCCGAGCCCGGGAAAAGACCCCTATCA TCCACTGCACCCACTATTGTGCTGTCAGAATTAGGCATCCCAGACCTCGTGGTCGGCGCT TCCGGCGGCTCAAGAATCACTACGAGTGTTTTACAAACAATTGTGAGGACGTACTGGTAT AACATGCCTATATTGGAAACGATAGCCTATCCACGTATACACCACCAGTTACTGCCCGAC CGCATAGAACTGGAAAGCTTCCCCATGATCGGTAAAGCCGTACTAAGCACTCTCAAGGAA ATGGGATATACGATGAAAGAAGTATTTCCCAAGAGCGTAGTTAATGCTATACGCAATGTC AGGGGAGAATGGCATGCGGTGAGTGACTATTGGAGAAAAAGAGGAATCTCCTCCGTATAC TAA
  • Download Fasta
  • Fasta :-

    MLLCNRKVPKTLNTCFILHIFTLLTLGVLVSGMPSKMVSFASQETLQRINNLLRGSANRD VDIIAEYLKKDDDDDGGDKDHHNIDIDPLPRRPSLTPDRQLLKVGLHGAISSDLEVCSNL TINEVLLKFPGSNAADAAVTQALCKGMVNFFNSGIGGGGYVVFSGKDDEDHLSIDFREKA PMDSHKFMFENCSLCSKIGGLAVGVPGELMGLYRLFKERGSGQVDWRDLIEPVAKLGSVG WQIGEALGATLELYEDVFLTLKEDWSFVLNSTHDGVLKEGDWIKRPALSNMLMELAKNGS VAPFYDPDHWIAKSMIDTVAKYNGIMNLQDVSSYDVHVTKPLSMKIRKGANFIPDNDMTV LTSSGSSSGAALLAALRIMDNFQNQEGGDYEKETTYHLLESMKWMASARSRLGDFEGEAL PKHIEEVLDPEWALKAVKSIKRNSQDGNFKTLENWTLYDPAYDINNPHGTAHFSIVDSHG NAVSLTTTINLLFGSLVHDPKTGVIFNNEMDDFAQFNKSNSFELAPSIYNFPEPGKRPLS STAPTIVLSELGIPDLVVGASGGSRITTSVLQTIVRTYWYNMPILETIAYPRIHHQLLPD RIELESFPMIGKAVLSTLKEMGYTMKEVFPKSVVNAIRNVRGEWHAVSDYWRKRGISSVY

    No Results
No Results
No Results
Loading, please wait...
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
YLR299W 444 S IKRNSQDGN 0.994 unsp YLR299W 444 S IKRNSQDGN 0.994 unsp YLR299W 444 S IKRNSQDGN 0.994 unsp YLR299W 540 S KRPLSSTAP 0.992 unsp YLR299W 94 S PRRPSLTPD 0.992 unsp YLR299W 164 S YVVFSGKDD 0.998 unsp
Showing 1 to 1 of 1 rows

YLR299W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India