YML092C | proteasome core particle subunit alpha 2

UniProt_ID: P23639

Computed_GO_Component_IDs: GO:0005737 GO:0005634 GO:0000502 GO:0005839 GO:0019773
Computed_GO_Components: cytoplasm nucleus proteasome complex proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0016787 GO:0008233 GO:0004298
Computed_GO_Functions: endopeptidase activity hydrolase activity peptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0006508 GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs: GO:0005737 GO:0042175 GO:0005634 GO:0005839 GO:0019773 GO:0034515
Curated_GO_Components: cytoplasm nuclear outer membrane-endoplasmic reticulum membrane network nucleus proteasome core complex proteasome core complex, alpha-subunit complex proteasome storage granule
Curated_GO_Function_IDs: GO:0004175 GO:0003674
Curated_GO_Functions: endopeptidase activity molecular_function
Curated_GO_Processes: proteasomal protein catabolic process proteasomal ubiquitin-independent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	YML092C	OTHER	0.997591	0.000794	0.001614

No Results

Fasta :-
>YML092C MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSET LSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQE ATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWN DELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTS QEINDRLEAL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YML092C.fa Sequence name : YML092C Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 3.927 CoefTot : -1.329 ChDiff : -4 ZoneTo : 47 KR : 4 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 1.029 0.037 0.452 MesoH : -0.139 0.294 -0.291 0.220 MuHd_075 : 22.138 11.331 6.195 4.245 MuHd_095 : 25.875 23.993 8.532 6.763 MuHd_100 : 21.326 27.406 6.925 6.502 MuHd_105 : 25.604 29.199 7.651 7.335 Hmax_075 : 8.283 12.163 2.863 4.060 Hmax_095 : 16.500 21.900 4.086 6.900 Hmax_100 : 16.500 26.100 4.086 7.520 Hmax_105 : 9.800 22.488 4.120 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9183 0.0817 DFMC : 0.9409 0.0591

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 YML092C MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGP 80 DYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWK 160 ATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTS 240 QEINDRLEAL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YML092C 4 ---MTDR|YS 0.087 . YML092C 17 TFSPSGK|LG 0.062 . YML092C 29 YALTAVK|QG 0.058 . YML092C 38 VTSLGIK|AT 0.068 . YML092C 49 VVIATEK|KS 0.060 . YML092C 50 VIATEKK|SS 0.163 . YML092C 63 MSETLSK|VS 0.054 . YML092C 83 GMGPDYR|VL 0.081 . YML092C 88 YRVLVDK|SR 0.088 . YML092C 90 VLVDKSR|KV 0.086 . YML092C 91 LVDKSRK|VA 0.110 . YML092C 98 VAHTSYK|RI 0.072 . YML092C 99 AHTSYKR|IY 0.172 . YML092C 108 GEYPPTK|LL 0.062 . YML092C 116 LVSEVAK|IM 0.075 . YML092C 128 TQSGGVR|PF 0.133 . YML092C 160 GSYFPWK|AT 0.094 . YML092C 166 KATAIGK|GS 0.065 . YML092C 172 KGSVAAK|TF 0.074 . YML092C 177 AKTFLEK|RW 0.066 . YML092C 178 KTFLEKR|WN 0.189 . YML092C 197 IALLTLK|ES 0.060 . YML092C 231 TGIPTDK|GP 0.060 . YML092C 234 PTDKGPR|FR 0.061 . YML092C 236 DKGPRFR|KL 0.121 . YML092C 237 KGPRFRK|LT 0.339 . YML092C 246 SQEINDR|LE 0.071 . ____________________________^_________________

Fasta :-
>YML092C ATGACCGACAGATATTCTTTTTCGTTGACCACTTTTTCTCCCAGCGGTAAATTGGGTCAA ATTGATTACGCCTTGACGGCAGTAAAACAAGGTGTCACCTCATTGGGTATAAAAGCTACG AATGGTGTAGTAATTGCCACAGAAAAGAAGTCGTCCTCGCCACTGGCCATGTCAGAAACA CTTTCGAAGGTATCCTTACTAACACCGGACATTGGTGCAGTATATTCCGGTATGGGGCCT GATTATAGAGTTTTAGTGGATAAATCAAGAAAGGTAGCACATACTAGTTATAAACGAATT TATGGTGAATACCCTCCCACCAAATTACTGGTTTCTGAAGTAGCCAAAATAATGCAAGAG GCTACACAGTCCGGTGGTGTCAGACCCTTTGGTGTTTCACTGTTGATTGCTGGCCACGAC GAATTTAATGGGTTTAGTTTATATCAAGTGGATCCTTCCGGTTCCTACTTCCCTTGGAAA GCCACCGCTATAGGAAAAGGTTCTGTGGCGGCAAAAACGTTTTTAGAGAAAAGATGGAAT GATGAACTGGAACTAGAAGACGCCATTCATATTGCCTTACTAACGCTGAAGGAGTCGGTA GAGGGCGAATTCAATGGTGACACCATTGAACTGGCTATTATTGGCGATGAGAACCCTGAC TTGCTAGGCTACACTGGTATTCCAACCGATAAAGGCCCTAGATTTAGAAAATTAACTTCT CAAGAAATAAATGATAGATTAGAAGCATTATGA
Download Fasta

Fasta :-

MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSET LSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQE ATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWN DELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTS QEINDRLEAL

Proteasome subunits

title: active site
coordinates: V32,E48,K50,K63,K166

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	YML092C	T	2	0.561	0.173	YML092C	T	60	0.502	0.019

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	YML092C	T	2	0.561	0.173	YML092C	T	60	0.502	0.019

YML092C | proteasome core particle subunit alpha 2

ID's

UniProt_ID: P23639

GEO Functions

Computed_GO_Component_IDs: GO:0005737 GO:0005634 GO:0000502 GO:0005839 GO:0019773

Computed_GO_Components: cytoplasm nucleus proteasome complex proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0016787 GO:0008233 GO:0004298

Computed_GO_Functions: endopeptidase activity hydrolase activity peptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0006508 GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs: GO:0005737 GO:0042175 GO:0005634 GO:0005839 GO:0019773 GO:0034515

Curated_GO_Components: cytoplasm nuclear outer membrane-endoplasmic reticulum membrane network nucleus proteasome core complex proteasome core complex, alpha-subunit complex proteasome storage granule

Curated_GO_Function_IDs: GO:0004175 GO:0003674

Curated_GO_Functions: endopeptidase activity molecular_function

Curated_GO_Processes: proteasomal protein catabolic process proteasomal ubiquitin-independent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

YML092C

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India