YMR095C | putative pyridoxal 5'-phosphate synthase

_IDPredictionOTHERSPmTPCS_Position
YMR095COTHER0.8670620.1244120.008526
No Results

  • Fasta :-

    >YMR095C MHKTHSTMSGKSMKVIGVLALQGAFLEHTNHLKRCLAENDYGIKIEIKTVKTPEDLAQCD ALIIPGGESTSMSLIAQRTGLYPCLYEFVHNPEKVVWGTCAGLIFLSAQLENESALVKTL GVLKVDVRRNAFGRQAQSFTQKCDFSNFIPGCDNFPATFIRAPVIERILDPIAVKSLYEL PVNGKDVVVAATQNHNILVTSFHPELADSDTRFHDWFIRQFVSN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YMR095C.fa Sequence name : YMR095C Sequence length : 224 VALUES OF COMPUTED PARAMETERS Coef20 : 3.910 CoefTot : -0.738 ChDiff : -1 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.353 0.120 0.564 MesoH : -0.290 0.450 -0.276 0.265 MuHd_075 : 11.993 9.734 3.799 2.555 MuHd_095 : 25.805 13.512 6.827 4.369 MuHd_100 : 23.490 13.989 6.618 4.680 MuHd_105 : 19.375 13.111 5.763 3.960 Hmax_075 : 14.467 17.000 1.969 5.020 Hmax_095 : 11.300 9.700 2.648 5.058 Hmax_100 : 11.300 9.700 2.373 3.610 Hmax_105 : 12.700 11.783 2.121 3.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8438 0.1562 DFMC : 0.7839 0.2161
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 224 YMR095C MHKTHSTMSGKSMKVIGVLALQGAFLEHTNHLKRCLAENDYGIKIEIKTVKTPEDLAQCDALIIPGGESTSMSLIAQRTG 80 LYPCLYEFVHNPEKVVWGTCAGLIFLSAQLENESALVKTLGVLKVDVRRNAFGRQAQSFTQKCDFSNFIPGCDNFPATFI 160 RAPVIERILDPIAVKSLYELPVNGKDVVVAATQNHNILVTSFHPELADSDTRFHDWFIRQFVSN 240 ................................................................................ 80 ................................................................................ 160 ................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YMR095C 3 ----MHK|TH 0.064 . YMR095C 11 HSTMSGK|SM 0.085 . YMR095C 14 MSGKSMK|VI 0.084 . YMR095C 33 EHTNHLK|RC 0.059 . YMR095C 34 HTNHLKR|CL 0.193 . YMR095C 44 ENDYGIK|IE 0.057 . YMR095C 48 GIKIEIK|TV 0.075 . YMR095C 51 IEIKTVK|TP 0.065 . YMR095C 78 MSLIAQR|TG 0.061 . YMR095C 94 FVHNPEK|VV 0.065 . YMR095C 118 NESALVK|TL 0.070 . YMR095C 124 KTLGVLK|VD 0.050 . YMR095C 128 VLKVDVR|RN 0.075 . YMR095C 129 LKVDVRR|NA 0.183 . YMR095C 134 RRNAFGR|QA 0.138 . YMR095C 142 AQSFTQK|CD 0.069 . YMR095C 161 FPATFIR|AP 0.091 . YMR095C 167 RAPVIER|IL 0.086 . YMR095C 175 LDPIAVK|SL 0.069 . YMR095C 185 ELPVNGK|DV 0.077 . YMR095C 212 LADSDTR|FH 0.098 . YMR095C 219 FHDWFIR|QF 0.077 . ____________________________^_________________

  • Fasta :-

    >YMR095C ATGCACAAAACCCACAGTACAATGTCCGGAAAGTCGATGAAAGTAATTGGGGTTTTGGCG TTGCAAGGTGCCTTTTTGGAGCATACCAACCATTTAAAAAGGTGTTTGGCTGAAAACGAC TACGGAATAAAGATAGAAATCAAAACTGTAAAAACTCCTGAGGATCTAGCCCAGTGCGAC GCCTTAATTATTCCCGGAGGAGAATCTACGTCGATGTCCCTCATCGCTCAAAGAACAGGC TTATATCCTTGTTTATACGAATTTGTTCATAATCCGGAAAAGGTAGTTTGGGGTACTTGT GCTGGTCTCATCTTTTTAAGCGCGCAATTAGAAAACGAAAGTGCCCTAGTAAAGACTTTA GGTGTGTTGAAGGTCGACGTGAGAAGAAACGCATTTGGAAGACAAGCTCAATCTTTTACA CAAAAGTGTGATTTTTCCAATTTCATACCTGGCTGTGATAATTTTCCTGCTACATTTATT CGCGCACCCGTGATCGAGAGAATTCTTGATCCTATCGCGGTTAAAAGTTTATATGAATTG CCAGTGAATGGAAAGGATGTGGTTGTAGCTGCAACGCAAAATCATAATATCCTTGTGACT TCTTTTCATCCAGAGCTTGCTGACAGTGATACAAGATTTCATGATTGGTTTATCAGACAG TTTGTTTCTAATTAA
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  • Fasta :-

    MHKTHSTMSGKSMKVIGVLALQGAFLEHTNHLKRCLAENDYGIKIEIKTVKTPEDLAQCD ALIIPGGESTSMSLIAQRTGLYPCLYEFVHNPEKVVWGTCAGLIFLSAQLENESALVKTL GVLKVDVRRNAFGRQAQSFTQKCDFSNFIPGCDNFPATFIRAPVIERILDPIAVKSLYEL PVNGKDVVVAATQNHNILVTSFHPELADSDTRFHDWFIRQFVSN

  • title: catalytic triad
  • coordinates: C100,H203,E205
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YMR095C9 SHSTMSGKSM0.996unspYMR095C12 SMSGKSMKVI0.991unsp

YMR095C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India