YMR150C | endopeptidase catalytic subunit IMP1

_IDPredictionOTHERSPmTPCS_Position
YMR150COTHER0.7773340.2027540.019912
No Results

  • Fasta :-

    >YMR150C MTVGTLPIWSKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQN GRGIKMGDCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIK VPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKIVAANNFDKPFWDGSIRNIWGFKWINN TFLDVQAKSN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YMR150C.fa Sequence name : YMR150C Sequence length : 190 VALUES OF COMPUTED PARAMETERS Coef20 : 4.570 CoefTot : -0.446 ChDiff : 0 ZoneTo : 31 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.294 -0.014 0.498 MesoH : -0.603 0.206 -0.418 0.209 MuHd_075 : 17.526 17.397 7.556 5.785 MuHd_095 : 31.682 21.142 7.556 7.712 MuHd_100 : 31.806 20.603 6.844 7.510 MuHd_105 : 31.810 21.822 7.076 7.621 Hmax_075 : 14.400 18.300 6.128 5.990 Hmax_095 : 16.713 15.400 3.289 5.661 Hmax_100 : 17.100 17.500 3.127 7.330 Hmax_105 : 16.712 16.800 2.308 6.256 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2547 0.7453 DFMC : 0.3577 0.6423 This protein is probably imported in mitochondria. f(Ser) = 0.0968 f(Arg) = 0.0323 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 190 YMR150C MTVGTLPIWSKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQNGRGIKMGDCIVALKPTDPNH 80 RICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKIVAANNF 160 DKPFWDGSIRNIWGFKWINNTFLDVQAKSN 240 ................................................................................ 80 ................................................................................ 160 .............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YMR150C 11 TLPIWSK|TF 0.079 . YMR150C 18 TFSYAIR|SL 0.145 . YMR150C 37 YEFTETR|GE 0.079 . YMR150C 56 DYVHVLK|NF 0.062 . YMR150C 62 KNFQNGR|GI 0.111 . YMR150C 65 QNGRGIK|MG 0.132 . YMR150C 74 DCIVALK|PT 0.062 . YMR150C 81 PTDPNHR|IC 0.081 . YMR150C 84 PNHRICK|RV 0.228 . YMR150C 85 NHRICKR|VT 0.210 . YMR150C 114 VLVDEER|FG 0.076 . YMR150C 120 RFGTYIK|VP 0.059 . YMR150C 140 SHSLDSR|TY 0.101 . YMR150C 153 MGLIMGK|IV 0.071 . YMR150C 162 AANNFDK|PF 0.070 . YMR150C 170 FWDGSIR|NI 0.080 . YMR150C 176 RNIWGFK|WI 0.067 . YMR150C 188 FLDVQAK|SN 0.089 . ____________________________^_________________

  • Fasta :-

    >YMR150C ATGACGGTTGGTACACTTCCCATCTGGTCAAAAACCTTTTCTTATGCAATTAGGTCATTA TGCTTCTTGCATATAATACATATGTATGCATACGAATTTACTGAGACGAGGGGAGAATCA ATGTTGCCAACACTGTCAGCGACCAATGATTATGTGCATGTCTTGAAAAATTTCCAAAAT GGTAGAGGCATAAAAATGGGTGACTGCATAGTAGCACTGAAACCTACTGACCCTAATCAT AGGATTTGCAAAAGGGTTACGGGTATGCCTGGTGATCTCGTGCTCGTGGATCCCAGTACG ATAGTTAATTATGTCGGCGATGTGCTTGTTGATGAGGAGAGGTTTGGTACCTATATTAAA GTCCCTGAAGGTCATGTTTGGGTAACCGGAGATAATTTGTCACATTCATTAGATTCAAGA ACATACAATGCATTACCCATGGGGCTGATCATGGGCAAGATTGTAGCTGCTAACAATTTT GACAAGCCCTTCTGGGACGGTTCGATACGCAATATTTGGGGTTTCAAATGGATCAATAAT ACATTTCTAGATGTGCAGGCTAAGAGCAACTGA
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  • Fasta :-

    MTVGTLPIWSKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQN GRGIKMGDCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIK VPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKIVAANNFDKPFWDGSIRNIWGFKWINN TFLDVQAKSN

    No Results
  • title: Catalytic site
  • coordinates: S40,K84
IDSitePositionGscoreIscore
YMR150CT20.5540.240
IDSitePositionGscoreIscore
YMR150CT20.5540.240
No Results

YMR150C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India