YNL320W | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
YNL320WSP0.3274050.4533010.219294CS pos: 22-23. SVA-TL. Pr: 0.5046
No Results

  • Fasta :-

    >YNL320W MLWKVSKMFLGGLVALTTISVATLYHYQNRLVYPSWAQGARNHVDTPDSRGIPYEKLTLI TQDHIKLEAWDIKNENSTSTVLILCPNAGNIGYFILIIDIFYRQFGMSVFIYSYRGYGNS EGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILE NTFLSIRKVIPYIFPLLKRFTLLCHEIWNSEGLMGSCSSETPFLFLSGLKDEIVPPFHMR KLYETCPSSNKKIFEFPLGSHNDTIIQDGYWDIIRDFLIEKGFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YNL320W.fa Sequence name : YNL320W Sequence length : 284 VALUES OF COMPUTED PARAMETERS Coef20 : 4.501 CoefTot : -0.854 ChDiff : 1 ZoneTo : 44 KR : 4 DE : 0 CleavSite : 43 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 1.924 0.350 0.717 MesoH : -0.346 0.513 -0.263 0.260 MuHd_075 : 18.784 18.012 5.027 4.972 MuHd_095 : 34.107 19.350 8.496 7.859 MuHd_100 : 27.513 19.325 7.485 6.135 MuHd_105 : 25.584 20.299 8.002 6.784 Hmax_075 : 11.000 20.500 3.611 4.559 Hmax_095 : 8.050 7.000 -0.192 3.658 Hmax_100 : 5.000 22.500 4.148 3.010 Hmax_105 : 18.375 19.600 3.437 6.685 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1644 0.8356 DFMC : 0.1661 0.8339 This protein is probably imported in mitochondria. f(Ser) = 0.0682 f(Arg) = 0.0455 CMi = 0.51020 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 284 YNL320W MLWKVSKMFLGGLVALTTISVATLYHYQNRLVYPSWAQGARNHVDTPDSRGIPYEKLTLITQDHIKLEAWDIKNENSTST 80 VLILCPNAGNIGYFILIIDIFYRQFGMSVFIYSYRGYGNSEGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGG 160 ANALYIASKFRDLCDGVILENTFLSIRKVIPYIFPLLKRFTLLCHEIWNSEGLMGSCSSETPFLFLSGLKDEIVPPFHMR 240 KLYETCPSSNKKIFEFPLGSHNDTIIQDGYWDIIRDFLIEKGFI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YNL320W 4 ---MLWK|VS 0.060 . YNL320W 7 MLWKVSK|MF 0.074 . YNL320W 30 LYHYQNR|LV 0.157 . YNL320W 41 SWAQGAR|NH 0.095 . YNL320W 50 VDTPDSR|GI 0.080 . YNL320W 56 RGIPYEK|LT 0.064 . YNL320W 66 ITQDHIK|LE 0.062 . YNL320W 73 LEAWDIK|NE 0.058 . YNL320W 103 IIDIFYR|QF 0.110 . YNL320W 115 VFIYSYR|GY 0.137 . YNL320W 127 EGSPSEK|GL 0.069 . YNL320W 130 PSEKGLK|LD 0.059 . YNL320W 148 TDSFHSK|RK 0.066 . YNL320W 149 DSFHSKR|KL 0.168 . YNL320W 150 SFHSKRK|LV 0.130 . YNL320W 156 KLVLYGR|SL 0.141 . YNL320W 169 ALYIASK|FR 0.069 . YNL320W 171 YIASKFR|DL 0.190 . YNL320W 187 NTFLSIR|KV 0.096 . YNL320W 188 TFLSIRK|VI 0.074 . YNL320W 198 YIFPLLK|RF 0.052 . YNL320W 199 IFPLLKR|FT 0.128 . YNL320W 230 LFLSGLK|DE 0.056 . YNL320W 240 VPPFHMR|KL 0.102 . YNL320W 241 PPFHMRK|LY 0.092 . YNL320W 251 TCPSSNK|KI 0.061 . YNL320W 252 CPSSNKK|IF 0.141 . YNL320W 275 GYWDIIR|DF 0.084 . YNL320W 281 RDFLIEK|GF 0.062 . ____________________________^_________________

  • Fasta :-

    >YNL320W ATGTTGTGGAAAGTTTCTAAGATGTTCTTGGGTGGCTTGGTAGCGCTAACAACAATATCG GTTGCGACCCTTTATCACTACCAAAATCGCCTAGTCTACCCATCATGGGCTCAAGGCGCC AGGAATCATGTTGACACTCCTGATTCCCGTGGAATCCCTTATGAAAAGCTAACCCTAATT ACACAAGACCACATTAAACTCGAGGCATGGGATATCAAGAATGAAAACTCAACAAGTACT GTGTTGATCTTATGTCCCAATGCCGGTAATATTGGATACTTTATACTAATAATTGACATT TTCTATCGTCAGTTTGGAATGAGTGTATTTATTTATTCGTATCGTGGTTATGGTAACTCA GAAGGTTCACCCAGCGAAAAGGGTTTGAAATTGGACGCTGATTGTGTCATATCGCATTTG TCAACGGATTCTTTCCATTCAAAGAGAAAACTAGTATTGTATGGTAGATCTCTAGGTGGT GCTAATGCTCTTTACATTGCTTCAAAATTTCGGGATCTATGCGATGGCGTTATACTGGAG AATACATTTTTGAGTATTCGAAAAGTTATCCCATATATTTTCCCCCTTTTGAAACGCTTT ACGCTTTTATGTCACGAAATCTGGAATTCAGAAGGCCTTATGGGAAGCTGTAGTTCAGAG ACGCCATTCTTGTTTTTAAGTGGATTAAAAGATGAAATCGTTCCACCCTTCCACATGAGG AAACTGTACGAAACATGTCCTAGTTCGAACAAAAAGATTTTCGAATTTCCACTTGGTTCA CACAATGATACTATTATTCAAGATGGGTACTGGGATATAATAAGAGATTTTCTAATAGAG AAGGGTTTTATCTAA
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  • Fasta :-

    MLWKVSKMFLGGLVALTTISVATLYHYQNRLVYPSWAQGARNHVDTPDSRGIPYEKLTLI TQDHIKLEAWDIKNENSTSTVLILCPNAGNIGYFILIIDIFYRQFGMSVFIYSYRGYGNS EGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILE NTFLSIRKVIPYIFPLLKRFTLLCHEIWNSEGLMGSCSSETPFLFLSGLKDEIVPPFHMR KLYETCPSSNKKIFEFPLGSHNDTIIQDGYWDIIRDFLIEKGFI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YNL320W147 SDSFHSKRKL0.991unspYNL320W147 SDSFHSKRKL0.991unspYNL320W147 SDSFHSKRKL0.991unspYNL320W123 SNSEGSPSEK0.995unspYNL320W125 SEGSPSEKGL0.995unsp

YNL320W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India