YNL334C | putative pyridoxal 5'-phosphate synthase

_IDPredictionOTHERSPmTPCS_Position
YNL334COTHER0.8536650.1455330.000802
No Results

  • Fasta :-

    >YNL334C MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGMIYISQQLSNEEKLVKTLNLLKVKVKR NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YNL334C.fa Sequence name : YNL334C Sequence length : 222 VALUES OF COMPUTED PARAMETERS Coef20 : 3.977 CoefTot : -0.129 ChDiff : -1 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.047 1.653 0.085 0.633 MesoH : -0.660 0.192 -0.414 0.171 MuHd_075 : 19.770 21.332 7.025 4.947 MuHd_095 : 8.840 10.751 3.094 1.979 MuHd_100 : 10.255 14.497 3.333 2.900 MuHd_105 : 12.538 13.455 3.087 2.987 Hmax_075 : 20.650 25.200 4.643 7.957 Hmax_095 : 13.300 21.600 2.664 6.150 Hmax_100 : 13.300 20.600 2.468 6.150 Hmax_105 : 16.200 19.338 3.045 6.067 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9664 0.0336 DFMC : 0.9800 0.0200
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 222 YNL334C MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGESTAMSLIAERTGFYDDLYAFV 80 HNPSKVTWGTCAGMIYISQQLSNEEKLVKTLNLLKVKVKRNAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVL 160 DPEHVQVLYKLDGKDNGGQELIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK 240 ................................................................................ 80 ................................................................................ 160 .............................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YNL334C 19 AFIEHVR|HV 0.137 . YNL334C 23 HVRHVEK|CI 0.071 . YNL334C 29 KCIVENR|DF 0.106 . YNL334C 34 NRDFYEK|KL 0.062 . YNL334C 35 RDFYEKK|LS 0.094 . YNL334C 42 LSVMTVK|DK 0.071 . YNL334C 44 VMTVKDK|NQ 0.060 . YNL334C 69 MSLIAER|TG 0.066 . YNL334C 85 FVHNPSK|VT 0.060 . YNL334C 106 QLSNEEK|LV 0.073 . YNL334C 109 NEEKLVK|TL 0.056 . YNL334C 115 KTLNLLK|VK 0.050 . YNL334C 117 LNLLKVK|VK 0.060 . YNL334C 119 LLKVKVK|RN 0.067 . YNL334C 120 LKVKVKR|NA 0.303 . YNL334C 125 KRNAFGR|QA 0.175 . YNL334C 132 QAQSSTR|IC 0.089 . YNL334C 152 FPATFIR|AP 0.106 . YNL334C 170 HVQVLYK|LD 0.069 . YNL334C 174 LYKLDGK|DN 0.081 . YNL334C 186 ELIVAAK|QK 0.073 . YNL334C 188 IVAAKQK|NN 0.069 . YNL334C 206 LAENDIR|FH 0.104 . YNL334C 213 FHDWFIR|EF 0.071 . YNL334C 218 IREFVLK|NY 0.085 . YNL334C 222 VLKNYSK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >YNL334C ATGACCGTCGTTATCGGAGTCTTGGCATTACAGGGTGCGTTCATTGAACATGTGCGACAC GTAGAAAAATGCATCGTCGAAAACAGGGATTTCTATGAAAAAAAACTATCTGTGATGACA GTGAAGGATAAAAATCAACTAGCTCAATGTGATGCATTGATCATACCTGGGGGAGAGTCG ACTGCAATGTCCCTTATTGCAGAAAGAACAGGATTTTACGACGATCTCTACGCATTCGTA CACAACCCAAGCAAGGTAACCTGGGGTACTTGTGCAGGTATGATTTATATTTCACAACAA TTATCTAACGAAGAAAAACTGGTCAAGACGCTGAATTTACTAAAGGTTAAAGTAAAAAGA AATGCATTTGGGAGACAAGCTCAGTCTTCTACCCGGATTTGCGACTTTTCAAACTTTATT CCTCACTGCAATGATTTTCCTGCTACTTTTATAAGAGCCCCAGTAATAGAAGAGGTGCTG GATCCTGAACATGTGCAGGTCCTGTACAAATTAGATGGGAAGGATAATGGTGGTCAAGAA CTAATTGTTGCCGCTAAGCAAAAAAACAATATTCTTGCGACATCATTTCATCCGGAATTG GCAGAAAACGATATACGGTTTCACGACTGGTTCATCAGAGAATTTGTTCTTAAAAACTAC AGTAAATAA
  • Download Fasta

  • Fasta :-

    MTVVIGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSVMTVKDKNQLAQCDALIIPGGES TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGMIYISQQLSNEEKLVKTLNLLKVKVKR NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE LIVAAKQKNNILATSFHPELAENDIRFHDWFIREFVLKNYSK

  • title: catalytic triad
  • coordinates: C91,H197,E199
No Results
No Results
IDSitePeptideScoreMethod
YNL334C102 SSQQLSNEEK0.992unsp

YNL334C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India