YOL038W | proteasome core particle subunit alpha 4

_IDPredictionOTHERSPmTPCS_Position
YOL038WOTHER0.9999170.0000430.000040
No Results

  • Fasta :-

    >YOL038W MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRIT PSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYD RKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEK QEQQEQDKKKKSNH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YOL038W.fa Sequence name : YOL038W Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 3.563 CoefTot : -0.295 ChDiff : 0 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.582 0.959 0.104 0.396 MesoH : -1.162 0.098 -0.476 0.052 MuHd_075 : 22.125 9.173 5.112 3.812 MuHd_095 : 17.959 8.952 4.264 3.990 MuHd_100 : 19.639 14.495 5.120 5.764 MuHd_105 : 18.930 17.720 5.062 6.629 Hmax_075 : 12.600 10.100 1.878 4.740 Hmax_095 : 13.100 9.100 1.678 5.340 Hmax_100 : 15.500 12.500 1.654 5.500 Hmax_105 : 5.600 11.600 0.374 5.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9588 0.0412 DFMC : 0.9526 0.0474
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 YOL038W MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNA 80 DSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWS 160 AQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEK 240 QEQQEQDKKKKSNH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YOL038W 6 -MSGYDR|AL 0.103 . YOL038W 28 YALEAVK|RG 0.053 . YOL038W 29 ALEAVKR|GT 0.294 . YOL038W 37 TCAVGVK|GK 0.068 . YOL038W 39 AVGVKGK|NC 0.061 . YOL038W 48 VVLGCER|RS 0.063 . YOL038W 49 VLGCERR|ST 0.243 . YOL038W 53 ERRSTLK|LQ 0.062 . YOL038W 58 LKLQDTR|IT 0.074 . YOL038W 63 TRITPSK|VS 0.063 . YOL038W 66 TPSKVSK|ID 0.104 . YOL038W 83 GLNADSR|IL 0.102 . YOL038W 88 SRILIEK|AR 0.068 . YOL038W 90 ILIEKAR|VE 0.089 . YOL038W 97 VEAQSHR|LT 0.084 . YOL038W 111 TVEYLTR|YV 0.158 . YOL038W 119 VAGVQQR|YT 0.126 . YOL038W 127 TQSGGVR|PF 0.119 . YOL038W 141 IAGFDPR|DD 0.161 . YOL038W 146 PRDDEPK|LY 0.070 . YOL038W 166 SAQTIGR|NS 0.098 . YOL038W 169 TIGRNSK|TV 0.175 . YOL038W 172 RNSKTVR|EF 0.105 . YOL038W 177 VREFLEK|NY 0.072 . YOL038W 181 LEKNYDR|KE 0.079 . YOL038W 182 EKNYDRK|EP 0.080 . YOL038W 193 TVEECVK|LT 0.061 . YOL038W 197 CVKLTVR|SL 0.112 . YOL038W 208 VVQTGAK|NI 0.060 . YOL038W 216 IEITVVK|PD 0.072 . YOL038W 240 TQIEQEK|QE 0.068 . YOL038W 248 EQQEQDK|KK 0.059 . YOL038W 249 QQEQDKK|KK 0.091 . YOL038W 250 QEQDKKK|KS 0.138 . YOL038W 251 EQDKKKK|SN 0.193 . ____________________________^_________________

  • Fasta :-

    >YOL038W ATGAGTGGTTACGATAGAGCTTTGTCCATTTTCTCCCCAGATGGACACATTTTCCAAGTG GAGTACGCCCTGGAGGCGGTAAAGAGGGGTACCTGTGCTGTAGGTGTCAAGGGTAAGAAT TGTGTAGTATTGGGCTGCGAAAGAAGGTCTACTTTGAAGCTGCAAGACACTAGAATTACG CCTTCCAAAGTTTCCAAAATTGACTCGCATGTGGTGTTGTCATTTTCTGGTTTAAATGCA GATTCCAGAATTCTTATCGAGAAGGCTAGAGTGGAGGCCCAAAGTCACAGACTAACGTTG GAGGATCCCGTGACGGTGGAGTATCTCACACGTTATGTCGCTGGTGTGCAACAAAGGTAC ACGCAGTCAGGAGGTGTTAGACCATTTGGTGTGTCGACGCTGATTGCCGGCTTCGACCCG AGAGATGATGAACCCAAGCTTTACCAGACCGAGCCAAGTGGTATATACTCTTCGTGGTCC GCTCAGACCATTGGGAGAAACTCCAAGACGGTACGTGAGTTTTTGGAGAAGAATTACGAT CGCAAAGAACCACCAGCCACAGTGGAAGAATGTGTCAAACTTACTGTAAGATCTCTGTTG GAGGTAGTTCAAACAGGTGCAAAAAATATTGAAATCACTGTTGTTAAGCCGGACTCAGAT ATTGTTGCGTTGAGCAGTGAGGAAATTAACCAGTACGTCACCCAAATCGAACAAGAAAAG CAAGAGCAGCAAGAGCAGGACAAAAAGAAAAAATCTAACCATTAA
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  • Fasta :-

    MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRIT PSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYD RKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEK QEQQEQDKKKKSNH

  • title: active site
  • coordinates: T31,E47,R49,K63,R166
No Results
No Results
IDSitePeptideScoreMethod
YOL038W65 SPSKVSKIDS0.997unsp

YOL038W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India