YOR157C | proteasome core particle subunit beta 2

_IDPredictionOTHERSPmTPCS_Position
YOR157COTHER0.9991730.0001100.000717
No Results

  • Fasta :-

    >YOR157C MAGLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNC AKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQ GHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEA IKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTA VLKESIVNICDIQEEQVDITA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YOR157C.fa Sequence name : YOR157C Sequence length : 261 VALUES OF COMPUTED PARAMETERS Coef20 : 3.535 CoefTot : 0.125 ChDiff : -4 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.494 1.229 0.212 0.554 MesoH : 0.051 0.374 -0.288 0.305 MuHd_075 : 30.186 17.712 8.032 4.273 MuHd_095 : 12.969 3.658 2.046 1.821 MuHd_100 : 18.646 6.624 3.978 2.589 MuHd_105 : 20.488 6.565 4.952 3.044 Hmax_075 : 11.783 8.167 -0.373 3.628 Hmax_095 : 1.600 3.500 -2.446 1.720 Hmax_100 : 1.600 3.500 -2.446 1.720 Hmax_105 : 2.800 2.100 -1.462 2.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9058 0.0942 DFMC : 0.8213 0.1787
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 261 YOR157C MAGLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAAD 80 TEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGS 160 LAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTA 240 VLKESIVNICDIQEEQVDITA 320 ................................................................................ 80 .......................P........................................................ 160 ................................................................................ 240 ..................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YOR157C 11 SFDNYQR|NN 0.092 . YOR157C 24 NSHTQPK|AT 0.110 . YOR157C 36 TTIVGVK|FN 0.070 . YOR157C 48 VIAADTR|ST 0.104 . YOR157C 58 GPIVADK|NC 0.062 . YOR157C 62 ADKNCAK|LH 0.064 . YOR157C 65 NCAKLHR|IS 0.092 . YOR157C 69 LHRISPK|IW 0.104 . YOR157C 101 HSLYTSR|EP 0.081 . YOR157C 104 YTSREPR|VV 0.584 *ProP* YOR157C 113 SALQMLK|QH 0.053 . YOR157C 118 LKQHLFK|YQ 0.098 . YOR157C 172 VLESHWK|QD 0.065 . YOR157C 177 WKQDLTK|EE 0.067 . YOR157C 182 TKEEAIK|LA 0.089 . YOR157C 211 CVMEIGK|DA 0.074 . YOR157C 217 KDAEYLR|NY 0.071 . YOR157C 225 YLTPNVR|EE 0.065 . YOR157C 228 PNVREEK|QK 0.140 . YOR157C 230 VREEKQK|SY 0.098 . YOR157C 233 EKQKSYK|FP 0.073 . YOR157C 236 KSYKFPR|GT 0.200 . YOR157C 243 GTTAVLK|ES 0.061 . ____________________________^_________________

  • Fasta :-

    >YOR157C ATGGCAGGTTTATCGTTCGACAATTATCAAAGAAATAATTTCTTAGCGGAAAACTCGCAC ACACAACCTAAGGCAACTTCCACGGGTACCACCATTGTAGGCGTAAAATTCAATAACGGA GTGGTGATTGCAGCAGATACAAGATCAACACAAGGTCCAATTGTCGCAGATAAGAATTGC GCAAAATTGCATAGAATTTCCCCCAAAATATGGTGTGCTGGTGCCGGTACCGCCGCCGAT ACTGAGGCAGTTACGCAGTTGATCGGGTCTAACATTGAATTACATTCCTTATATACCTCG AGAGAACCAAGAGTGGTCTCAGCTTTACAAATGCTAAAGCAGCACCTATTTAAGTACCAA GGTCATATTGGTGCTTATTTGATTGTTGCAGGTGTAGACCCTACGGGATCTCATTTGTTC TCCATTCATGCGCATGGTTCTACTGACGTGGGCTACTACCTTTCTCTAGGATCTGGTTCT CTAGCGGCAATGGCTGTGTTGGAATCACACTGGAAGCAAGACCTTACGAAGGAGGAAGCC ATAAAGTTGGCCTCTGATGCAATCCAGGCTGGTATCTGGAATGATTTGGGGTCTGGTTCT AATGTGGATGTGTGTGTCATGGAAATAGGTAAAGATGCAGAATACTTGAGGAATTACTTG ACTCCAAATGTTAGAGAAGAAAAGCAGAAAAGCTACAAATTCCCCAGGGGTACAACTGCT GTGCTGAAGGAGAGTATTGTCAATATTTGTGACATACAAGAAGAACAAGTCGATATAACG GCTTGA
  • Download Fasta

  • Fasta :-

    MAGLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNC AKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQ GHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEA IKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTA VLKESIVNICDIQEEQVDITA

  • title: active site
  • coordinates: T30,D46,R48,K62,S158,D195,S198,G199
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YOR157C67 SLHRISPKIW0.996unspYOR157C231 SEKQKSYKFP0.997unsp

YOR157C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India