YPL246C | putative rhomboid protease RBD2

_IDPredictionOTHERSPmTPCS_Position
YPL246COTHER0.9996330.0003140.000053
No Results

  • Fasta :-

    >YPL246C MNWKSYVFPGGHPPAALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQMSRLSLYP LIHLSLPHLLFNVLAIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLYPEALV AGASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHF FGLCVGYAIGYKESWFNKITPPGWIITKIEKSLDGLIRLIPWGIKYYRDEDIDRTKDYEP LMSTETPLPLHNDNSGTVLGTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YPL246C.fa Sequence name : YPL246C Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.075 CoefTot : -0.654 ChDiff : 0 ZoneTo : 38 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.400 2.682 0.454 0.904 MesoH : 0.909 1.137 -0.010 0.535 MuHd_075 : 13.677 16.534 4.532 4.530 MuHd_095 : 11.803 8.098 4.270 3.189 MuHd_100 : 8.901 11.978 3.894 3.343 MuHd_105 : 9.131 15.411 3.587 4.384 Hmax_075 : 19.133 15.400 1.812 5.507 Hmax_095 : 18.300 16.700 1.207 6.230 Hmax_100 : 19.500 11.300 1.753 6.140 Hmax_105 : 19.200 21.800 2.142 7.088 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9876 0.0124 DFMC : 0.9771 0.0229
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 YPL246C MNWKSYVFPGGHPPAALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQMSRLSLYPLIHLSLPHLLFNVLAIWAPL 80 NLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLYPEALVAGASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTP 160 LVLLVAIAVVIPGSSFWGHFFGLCVGYAIGYKESWFNKITPPGWIITKIEKSLDGLIRLIPWGIKYYRDEDIDRTKDYEP 240 LMSTETPLPLHNDNSGTVLGTA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YPL246C 4 ---MNWK|SY 0.070 . YPL246C 38 SFIFALR|ED 0.066 . YPL246C 50 APESLFK|LQ 0.057 . YPL246C 55 FKLQMSR|LS 0.066 . YPL246C 112 LYCLLGK|LL 0.060 . YPL246C 137 FAYYSFK|ES 0.064 . YPL246C 142 FKESQIR|PR 0.090 . YPL246C 144 ESQIRPR|TR 0.080 . YPL246C 146 QIRPRTR|IF 0.096 . YPL246C 149 PRTRIFR|TD 0.205 . YPL246C 192 GYAIGYK|ES 0.056 . YPL246C 198 KESWFNK|IT 0.079 . YPL246C 208 PGWIITK|IE 0.054 . YPL246C 211 IITKIEK|SL 0.077 . YPL246C 218 SLDGLIR|LI 0.105 . YPL246C 225 LIPWGIK|YY 0.060 . YPL246C 228 WGIKYYR|DE 0.099 . YPL246C 234 RDEDIDR|TK 0.083 . YPL246C 236 EDIDRTK|DY 0.083 . ____________________________^_________________

  • Fasta :-

    >YPL246C ATGAATTGGAAGTCGTACGTTTTTCCCGGTGGTCATCCACCAGCTGCGTTGACCACAGGC CTTGTGGTATTTCTAACCGCTATTTACCTGTTAAGTTTTATTTTTGCCCTAAGGGAAGAC CTGTCGTTGGCGCCAGAGTCATTGTTCAAACTGCAAATGAGCAGGCTATCGCTTTATCCT TTAATTCACCTATCATTGCCTCATTTACTGTTCAATGTGCTAGCCATCTGGGCACCCTTG AATCTCTTCGAAGAAACGCATGGGACTGTGTACACAGGTGTTTTTTTGAACCTGAGTGCT CTATTTGCCGGAATTCTGTACTGTTTGTTGGGTAAGTTGCTATATCCAGAAGCATTAGTT GCAGGCGCCAGTGGGTGGTGTTTCACCTTATTCGCATACTATAGTTTTAAAGAATCACAG ATCCGCCCTAGAACAAGGATCTTTCGCACAGACTACTCAATTCCGACATTATATACACCC CTAGTACTATTAGTCGCAATTGCCGTCGTTATACCTGGCTCCAGTTTCTGGGGTCATTTT TTCGGCTTATGTGTCGGTTACGCCATAGGCTACAAGGAATCGTGGTTTAACAAGATCACT CCACCAGGATGGATCATCACCAAAATCGAAAAAAGTTTAGACGGTTTAATTCGATTAATA CCTTGGGGAATTAAGTATTACAGAGATGAGGATATCGACAGAACTAAAGATTACGAACCG TTAATGTCCACAGAAACACCATTGCCTCTCCACAATGACAACTCCGGCACTGTCCTAGGG ACTGCCTAG
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  • Fasta :-

    MNWKSYVFPGGHPPAALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQMSRLSLYP LIHLSLPHLLFNVLAIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLYPEALV AGASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHF FGLCVGYAIGYKESWFNKITPPGWIITKIEKSLDGLIRLIPWGIKYYRDEDIDRTKDYEP LMSTETPLPLHNDNSGTVLGTA

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YPL246CT2610.5970.046YPL246CT2570.5810.022
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YPL246CT2610.5970.046YPL246CT2570.5810.022
No Results

YPL246C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India