YPR103W | proteasome core particle subunit beta 5

_IDPredictionOTHERSPmTPCS_Position
YPR103WOTHER0.9998290.0001090.000062
No Results

  • Fasta :-

    >YPR103W MQAIADSFSVPNRLVKELQYDNEQNLESDFVTGASQFQRLAPSLTVPPIASPQQFLRAHT DDSRNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTM AGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYT RKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAA HRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEEGSFNNVIG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YPR103W.fa Sequence name : YPR103W Sequence length : 287 VALUES OF COMPUTED PARAMETERS Coef20 : 3.905 CoefTot : 0.127 ChDiff : -5 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.018 1.200 0.112 0.576 MesoH : -0.295 0.322 -0.314 0.230 MuHd_075 : 32.735 27.436 11.132 7.058 MuHd_095 : 35.433 20.465 9.759 7.409 MuHd_100 : 45.548 27.633 11.989 9.784 MuHd_105 : 45.705 27.561 11.333 10.057 Hmax_075 : 15.867 20.650 3.715 5.997 Hmax_095 : 14.200 15.700 2.635 5.360 Hmax_100 : 16.000 16.700 2.795 5.840 Hmax_105 : 16.450 16.275 2.565 5.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3243 0.6757 DFMC : 0.5399 0.4601
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 287 YPR103W MQAIADSFSVPNRLVKELQYDNEQNLESDFVTGASQFQRLAPSLTVPPIASPQQFLRAHTDDSRNPDCKIKIAHGTTTLA 80 FRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160 LVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAA 240 HRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEEGSFNNVIG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YPR103W 13 SFSVPNR|LV 0.163 . YPR103W 16 VPNRLVK|EL 0.119 . YPR103W 39 GASQFQR|LA 0.101 . YPR103W 57 SPQQFLR|AH 0.099 . YPR103W 64 AHTDDSR|NP 0.071 . YPR103W 69 SRNPDCK|IK 0.090 . YPR103W 71 NPDCKIK|IA 0.076 . YPR103W 82 TTTLAFR|FQ 0.134 . YPR103W 94 IVAVDSR|AT 0.086 . YPR103W 107 VASQTVK|KV 0.089 . YPR103W 108 ASQTVKK|VI 0.128 . YPR103W 139 WLGSQCR|LH 0.087 . YPR103W 144 CRLHELR|EK 0.089 . YPR103W 146 LHELREK|ER 0.057 . YPR103W 148 ELREKER|IS 0.088 . YPR103W 156 SVAAASK|IL 0.066 . YPR103W 166 NLVYQYK|GA 0.093 . YPR103W 181 MICGYTR|KE 0.086 . YPR103W 182 ICGYTRK|EG 0.076 . YPR103W 196 VDSDGTR|LK 0.109 . YPR103W 198 SDGTRLK|GD 0.067 . YPR103W 220 VLDSNYK|WD 0.060 . YPR103W 233 DALYLGK|RS 0.054 . YPR103W 234 ALYLGKR|SI 0.265 . YPR103W 242 ILAAAHR|DA 0.160 . YPR103W 274 VGELFWK|VK 0.062 . YPR103W 276 ELFWKVK|EE 0.071 . ____________________________^_________________

  • Fasta :-

    >YPR103W ATGCAAGCTATTGCCGATAGTTTCAGTGTACCAAACAGATTGGTTAAGGAACTTCAATAT GACAACGAACAAAACTTAGAGAGCGATTTCGTAACGGGCGCCTCCCAGTTTCAACGTTTG GCACCATCGCTTACGGTTCCACCAATTGCGTCTCCACAGCAGTTTTTAAGAGCACACACA GATGATTCACGAAACCCAGACTGTAAAATCAAGATCGCACATGGTACTACAACCTTAGCA TTTAGATTTCAAGGCGGTATTATTGTGGCAGTAGATTCTCGTGCCACTGCCGGCAATTGG GTTGCTTCTCAAACTGTGAAGAAAGTTATTGAGATCAACCCATTTTTATTGGGTACAATG GCTGGTGGTGCGGCAGATTGTCAATTTTGGGAAACTTGGCTAGGTTCTCAGTGTAGGCTG CACGAGCTGAGGGAAAAGGAACGTATATCTGTCGCAGCCGCATCCAAGATTTTAAGCAAT TTAGTATACCAATATAAAGGGGCCGGTTTATCAATGGGTACTATGATCTGTGGTTACACT AGGAAGGAGGGCCCAACCATTTATTACGTCGACTCAGACGGTACAAGATTAAAAGGTGAC ATATTCTGCGTTGGTTCAGGTCAAACATTTGCATATGGTGTTCTAGACTCTAACTATAAA TGGGATTTATCCGTTGAAGATGCTTTATATCTAGGTAAGAGATCTATTTTAGCTGCTGCC CATAGAGATGCTTACTCTGGTGGTTCTGTAAATTTATATCATGTTACCGAGGATGGTTGG ATATATCACGGTAATCATGACGTAGGTGAACTATTTTGGAAGGTCAAGGAAGAGGAAGGA TCTTTCAACAACGTTATTGGCTAA
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  • Fasta :-

    MQAIADSFSVPNRLVKELQYDNEQNLESDFVTGASQFQRLAPSLTVPPIASPQQFLRAHT DDSRNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTM AGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYT RKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAA HRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEEGSFNNVIG

  • title: active site
  • coordinates: T76,D92,R94,K108,S206,D243,S246,G247
No Results
No Results
IDSitePeptideScoreMethod
YPR103W224 SKWDLSVEDA0.996unsp

YPR103W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India