• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
cgd1_1680 SP 0.046456 0.953099 0.000445 CS pos: 20-21. SLS-CS. Pr: 0.5020
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >cgd1_1680 MLCLLLFIIIISINNEISLSCSSSIWKSGYSVLKPKTDDRSYKNITLENGITALLIEDKF SEKAGFTVGIKVGSFNNPVYALGLFHLIEHVLFLGTKKYPAPESYDEFMAQHGGKNNAYT SEERTIYFNEIGEEYLEEGLDRFSHFFIDPLFYENVIEKEIHIINSEHLKNIPNEFDRLF HMLKTHTNKPMSQFTTGNIETLVDIPNKLGISIPRLLKKMYKKYYCGINMFIVLSSKRSL TDQEKLLQKYFSGVLIDNDGQCEFSSLKKEHGILNKSIIDQKYLSKKIHVKSLGGRDLLW LIWSFPARLISPVKQPLIYLSYILNSKQKNSLFWFLQKNNYITNSNSVYENYTFGSIFIY QLELTSEGLKNQFEIIGLIYKYINKLKESKELLKVYQGIRSLTEREFITNTEMLESSPMH STSEICSKMIQYGVHAALSGDILIEDVDENLIYEILNAISPFDTLFLVSDEQEFSGTYEK FFHVKHAIEDIPIKTLNAWKKTKFNEREENEIKLPTPEKCSPINLRIIQEVEDLSTPQRL DSMLANIWWNGPVKKSHKIGIKILLKFPRRYNKGIETQVWGEIITYILDTLIKEKIERYS ECGMSFYIEWDVEGILISIDTFGYSDDIDILLNEIVASEIANISNFDCSILNEIIAELNN SKYAFNSEDTTYSKIMLIIKSLQTNGEYTEWEYRNFINRMFVEIENQNPSKNRHKFISFI LEYTQTILGSSSNKGYNKCELFNSWAYKLLHRQSIIAYLQGNISKNKSLYLIEKFVLNSK ILSLNDKYSMKKKIHKLTRPIDIALINPVFEDINNTVLAFYQFGVPSFEEKLHLMALQPI IQGYIYDNLRTNKQLGYIIFANIVPISSTRLLVVGVEGDNNNSVEKIESIIRNTLYEFST RKLGNMESHMFEDIKSALIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYIN NKMTIEHLYNTFSKLINSKERTRSHSTIKAIYYSKTSPEFKKQEFIDKYMNSALSIARMS LKEDDFY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd1_1680.fa Sequence name : cgd1_1680 Sequence length : 1027 VALUES OF COMPUTED PARAMETERS Coef20 : 4.726 CoefTot : 0.128 ChDiff : -7 ZoneTo : 37 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 2.241 0.244 0.732 MesoH : -0.380 0.497 -0.347 0.300 MuHd_075 : 13.532 10.186 5.453 2.748 MuHd_095 : 24.401 21.067 10.083 6.303 MuHd_100 : 24.963 18.722 9.482 6.362 MuHd_105 : 25.548 17.933 7.846 6.917 Hmax_075 : 14.200 21.000 5.865 5.060 Hmax_095 : 13.825 15.312 4.387 4.734 Hmax_100 : 12.800 13.000 4.391 4.530 Hmax_105 : 14.800 14.200 2.250 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9605 0.0395 DFMC : 0.9486 0.0514
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1027 cgd1_1680 MLCLLLFIIIISINNEISLSCSSSIWKSGYSVLKPKTDDRSYKNITLENGITALLIEDKFSEKAGFTVGIKVGSFNNPVY 80 ALGLFHLIEHVLFLGTKKYPAPESYDEFMAQHGGKNNAYTSEERTIYFNEIGEEYLEEGLDRFSHFFIDPLFYENVIEKE 160 IHIINSEHLKNIPNEFDRLFHMLKTHTNKPMSQFTTGNIETLVDIPNKLGISIPRLLKKMYKKYYCGINMFIVLSSKRSL 240 TDQEKLLQKYFSGVLIDNDGQCEFSSLKKEHGILNKSIIDQKYLSKKIHVKSLGGRDLLWLIWSFPARLISPVKQPLIYL 320 SYILNSKQKNSLFWFLQKNNYITNSNSVYENYTFGSIFIYQLELTSEGLKNQFEIIGLIYKYINKLKESKELLKVYQGIR 400 SLTEREFITNTEMLESSPMHSTSEICSKMIQYGVHAALSGDILIEDVDENLIYEILNAISPFDTLFLVSDEQEFSGTYEK 480 FFHVKHAIEDIPIKTLNAWKKTKFNEREENEIKLPTPEKCSPINLRIIQEVEDLSTPQRLDSMLANIWWNGPVKKSHKIG 560 IKILLKFPRRYNKGIETQVWGEIITYILDTLIKEKIERYSECGMSFYIEWDVEGILISIDTFGYSDDIDILLNEIVASEI 640 ANISNFDCSILNEIIAELNNSKYAFNSEDTTYSKIMLIIKSLQTNGEYTEWEYRNFINRMFVEIENQNPSKNRHKFISFI 720 LEYTQTILGSSSNKGYNKCELFNSWAYKLLHRQSIIAYLQGNISKNKSLYLIEKFVLNSKILSLNDKYSMKKKIHKLTRP 800 IDIALINPVFEDINNTVLAFYQFGVPSFEEKLHLMALQPIIQGYIYDNLRTNKQLGYIIFANIVPISSTRLLVVGVEGDN 880 NNSVEKIESIIRNTLYEFSTRKLGNMESHMFEDIKSALIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYIN 960 NKMTIEHLYNTFSKLINSKERTRSHSTIKAIYYSKTSPEFKKQEFIDKYMNSALSIARMSLKEDDFY 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd1_1680 27 CSSSIWK|SG 0.088 . cgd1_1680 34 SGYSVLK|PK 0.067 . cgd1_1680 36 YSVLKPK|TD 0.071 . cgd1_1680 40 KPKTDDR|SY 0.123 . cgd1_1680 43 TDDRSYK|NI 0.161 . cgd1_1680 59 ALLIEDK|FS 0.084 . cgd1_1680 63 EDKFSEK|AG 0.065 . cgd1_1680 71 GFTVGIK|VG 0.053 . cgd1_1680 97 VLFLGTK|KY 0.057 . cgd1_1680 98 LFLGTKK|YP 0.081 . cgd1_1680 115 MAQHGGK|NN 0.060 . cgd1_1680 124 AYTSEER|TI 0.077 . cgd1_1680 142 LEEGLDR|FS 0.095 . cgd1_1680 159 YENVIEK|EI 0.073 . cgd1_1680 170 INSEHLK|NI 0.078 . cgd1_1680 178 IPNEFDR|LF 0.103 . cgd1_1680 184 RLFHMLK|TH 0.062 . cgd1_1680 189 LKTHTNK|PM 0.073 . cgd1_1680 208 LVDIPNK|LG 0.058 . cgd1_1680 215 LGISIPR|LL 0.081 . cgd1_1680 218 SIPRLLK|KM 0.088 . cgd1_1680 219 IPRLLKK|MY 0.149 . cgd1_1680 222 LLKKMYK|KY 0.075 . cgd1_1680 223 LKKMYKK|YY 0.146 . cgd1_1680 237 FIVLSSK|RS 0.054 . cgd1_1680 238 IVLSSKR|SL 0.395 . cgd1_1680 245 SLTDQEK|LL 0.065 . cgd1_1680 249 QEKLLQK|YF 0.074 . cgd1_1680 268 CEFSSLK|KE 0.059 . cgd1_1680 269 EFSSLKK|EH 0.106 . cgd1_1680 276 EHGILNK|SI 0.087 . cgd1_1680 282 KSIIDQK|YL 0.087 . cgd1_1680 286 DQKYLSK|KI 0.063 . cgd1_1680 287 QKYLSKK|IH 0.112 . cgd1_1680 291 SKKIHVK|SL 0.100 . cgd1_1680 296 VKSLGGR|DL 0.127 . cgd1_1680 308 IWSFPAR|LI 0.157 . cgd1_1680 314 RLISPVK|QP 0.061 . cgd1_1680 327 SYILNSK|QK 0.055 . cgd1_1680 329 ILNSKQK|NS 0.064 . cgd1_1680 338 LFWFLQK|NN 0.060 . cgd1_1680 370 LTSEGLK|NQ 0.062 . cgd1_1680 381 IIGLIYK|YI 0.065 . cgd1_1680 385 IYKYINK|LK 0.059 . cgd1_1680 387 KYINKLK|ES 0.063 . cgd1_1680 390 NKLKESK|EL 0.062 . cgd1_1680 394 ESKELLK|VY 0.059 . cgd1_1680 400 KVYQGIR|SL 0.120 . cgd1_1680 405 IRSLTER|EF 0.134 . cgd1_1680 428 TSEICSK|MI 0.089 . cgd1_1680 480 FSGTYEK|FF 0.067 . cgd1_1680 485 EKFFHVK|HA 0.082 . cgd1_1680 494 IEDIPIK|TL 0.064 . cgd1_1680 500 KTLNAWK|KT 0.060 . cgd1_1680 501 TLNAWKK|TK 0.135 . cgd1_1680 503 NAWKKTK|FN 0.097 . cgd1_1680 507 KTKFNER|EE 0.077 . cgd1_1680 513 REENEIK|LP 0.059 . cgd1_1680 519 KLPTPEK|CS 0.062 . cgd1_1680 526 CSPINLR|II 0.117 . cgd1_1680 539 DLSTPQR|LD 0.088 . cgd1_1680 554 WWNGPVK|KS 0.071 . cgd1_1680 555 WNGPVKK|SH 0.219 . cgd1_1680 558 PVKKSHK|IG 0.066 . cgd1_1680 562 SHKIGIK|IL 0.059 . cgd1_1680 566 GIKILLK|FP 0.061 . cgd1_1680 569 ILLKFPR|RY 0.127 . cgd1_1680 570 LLKFPRR|YN 0.201 . cgd1_1680 573 FPRRYNK|GI 0.321 . cgd1_1680 593 ILDTLIK|EK 0.054 . cgd1_1680 595 DTLIKEK|IE 0.062 . cgd1_1680 598 IKEKIER|YS 0.114 . cgd1_1680 662 AELNNSK|YA 0.078 . cgd1_1680 674 EDTTYSK|IM 0.053 . cgd1_1680 680 KIMLIIK|SL 0.082 . cgd1_1680 694 YTEWEYR|NF 0.073 . cgd1_1680 699 YRNFINR|MF 0.147 . cgd1_1680 711 ENQNPSK|NR 0.067 . cgd1_1680 713 QNPSKNR|HK 0.107 . cgd1_1680 715 PSKNRHK|FI 0.097 . cgd1_1680 734 LGSSSNK|GY 0.079 . cgd1_1680 738 SNKGYNK|CE 0.054 . cgd1_1680 748 FNSWAYK|LL 0.079 . cgd1_1680 752 AYKLLHR|QS 0.081 . cgd1_1680 765 LQGNISK|NK 0.066 . cgd1_1680 767 GNISKNK|SL 0.101 . cgd1_1680 774 SLYLIEK|FV 0.076 . cgd1_1680 780 KFVLNSK|IL 0.058 . cgd1_1680 787 ILSLNDK|YS 0.078 . cgd1_1680 791 NDKYSMK|KK 0.069 . cgd1_1680 792 DKYSMKK|KI 0.102 . cgd1_1680 793 KYSMKKK|IH 0.110 . cgd1_1680 796 MKKKIHK|LT 0.072 . cgd1_1680 799 KIHKLTR|PI 0.153 . cgd1_1680 831 VPSFEEK|LH 0.068 . cgd1_1680 850 YIYDNLR|TN 0.073 . cgd1_1680 853 DNLRTNK|QL 0.162 . cgd1_1680 870 VPISSTR|LL 0.086 . cgd1_1680 886 NNNSVEK|IE 0.079 . cgd1_1680 892 KIESIIR|NT 0.074 . cgd1_1680 901 LYEFSTR|KL 0.116 . cgd1_1680 902 YEFSTRK|LG 0.069 . cgd1_1680 915 HMFEDIK|SA 0.093 . cgd1_1680 923 ALIQEAK|SI 0.125 . cgd1_1680 932 GNSFNQK|LN 0.067 . cgd1_1680 941 HYWDEIR|YV 0.139 . cgd1_1680 954 ESFNLQR|AI 0.105 . cgd1_1680 962 IDYINNK|MT 0.069 . cgd1_1680 974 LYNTFSK|LI 0.081 . cgd1_1680 979 SKLINSK|ER 0.061 . cgd1_1680 981 LINSKER|TR 0.098 . cgd1_1680 983 NSKERTR|SH 0.129 . cgd1_1680 989 RSHSTIK|AI 0.079 . cgd1_1680 995 KAIYYSK|TS 0.058 . cgd1_1680 1001 KTSPEFK|KQ 0.074 . cgd1_1680 1002 TSPEFKK|QE 0.102 . cgd1_1680 1008 KQEFIDK|YM 0.071 . cgd1_1680 1018 SALSIAR|MS 0.080 . cgd1_1680 1022 IARMSLK|ED 0.067 . ____________________________^_________________
  • Fasta :-

    >cgd1_1680 GATATCAAAAAAATACAAATGCTATGCTTGCTTTTATTTATTATAATTATCAGTATCAAC AATGAAATTTCGCTTAGCTGCTCAAGCTCTATTTGGAAATCAGGCTACTCTGTTTTAAAG CCAAAAACAGACGATAGAAGCTATAAAAACATCACTTTAGAAAATGGAATTACTGCACTG CTGATAGAAGATAAATTTTCAGAAAAAGCAGGTTTTACTGTTGGGATAAAAGTTGGATCT TTTAATAATCCTGTTTATGCTTTGGGATTATTTCATTTAATTGAACATGTGCTTTTTTTG GGGACAAAAAAGTATCCGGCTCCTGAAAGCTACGATGAATTTATGGCCCAACATGGTGGA AAAAACAATGCATATACTTCAGAAGAAAGAACAATCTACTTTAATGAAATTGGGGAAGAG TACTTGGAAGAAGGATTAGATCGCTTTTCACACTTTTTTATAGATCCTTTATTTTATGAA AATGTTATTGAAAAAGAAATTCATATAATAAATTCAGAGCATTTGAAAAATATTCCCAAT GAATTTGATCGTCTATTTCATATGTTAAAAACTCACACAAATAAGCCAATGTCACAATTC ACAACAGGAAATATTGAAACATTGGTTGACATTCCAAATAAATTAGGGATATCAATCCCA AGACTACTTAAAAAAATGTATAAAAAATATTATTGTGGAATAAATATGTTTATTGTTTTA TCTTCAAAGAGAAGTTTAACAGATCAGGAAAAATTATTACAAAAATATTTTTCTGGAGTT TTAATCGATAATGATGGACAATGCGAATTCAGTTCACTAAAAAAAGAGCATGGCATTTTG AACAAATCCATAATTGATCAAAAATATTTGAGTAAGAAGATCCACGTAAAATCTCTCGGC GGACGCGATTTACTGTGGTTAATTTGGTCATTTCCAGCTCGTTTAATTTCTCCTGTCAAA CAGCCGTTGATTTATTTATCATATATTCTTAATTCTAAACAAAAAAACTCACTCTTCTGG TTTCTACAAAAAAACAATTATATAACAAATTCAAACTCAGTATATGAAAATTATACATTT GGTAGTATTTTCATCTATCAATTGGAATTAACATCAGAAGGGTTAAAAAATCAATTCGAA ATAATTGGTTTAATTTATAAATATATCAACAAATTAAAAGAAAGCAAAGAATTATTAAAG GTTTATCAAGGAATAAGATCATTAACAGAGAGAGAGTTCATCACAAACACAGAAATGTTA GAAAGTTCACCTATGCATTCCACATCAGAAATTTGTTCCAAGATGATTCAATACGGAGTT CATGCAGCATTAAGTGGAGATATTCTAATCGAAGATGTTGATGAAAATTTAATTTACGAG ATTTTGAATGCTATTTCGCCATTTGATACTTTATTTTTAGTAAGTGATGAACAGGAATTT TCAGGAACTTATGAGAAATTTTTTCATGTTAAGCACGCTATTGAAGACATTCCCATAAAA ACATTAAATGCTTGGAAAAAAACAAAATTTAATGAGCGAGAAGAAAACGAAATAAAATTA CCAACTCCAGAAAAGTGTTCGCCAATTAATTTAAGAATAATTCAAGAGGTAGAAGATTTA TCAACTCCGCAAAGGTTAGATTCCATGTTAGCTAATATTTGGTGGAATGGTCCTGTAAAA AAAAGTCATAAAATCGGAATAAAAATACTTCTCAAGTTTCCAAGGAGATATAATAAAGGA ATTGAAACTCAAGTTTGGGGAGAAATTATTACGTATATTTTAGATACTTTGATTAAAGAA AAAATTGAGAGGTATAGTGAATGCGGAATGTCATTTTATATAGAATGGGATGTCGAGGGT ATCTTAATAAGCATAGATACATTTGGGTATTCAGATGATATCGACATTCTTTTGAACGAA ATAGTTGCATCAGAAATTGCAAATATTTCTAATTTTGATTGCAGCATTTTGAATGAAATC ATTGCAGAGCTAAATAATTCTAAATATGCTTTTAATTCAGAAGATACAACATATTCTAAA ATTATGTTAATAATTAAGTCATTGCAAACCAATGGAGAATACACAGAGTGGGAATATAGA AACTTTATTAACAGAATGTTCGTTGAAATAGAAAATCAAAATCCCAGCAAAAATAGACAT AAATTTATTTCATTCATACTTGAATATACACAAACAATTTTGGGTTCAAGTTCAAATAAA GGATACAATAAATGCGAATTGTTTAATAGTTGGGCATACAAGCTATTACATAGACAATCA ATTATTGCATATTTACAGGGAAATATTTCCAAGAATAAATCTTTGTATCTAATTGAGAAG TTTGTATTAAATAGCAAAATTTTATCACTTAATGATAAATATTCAATGAAAAAAAAAATC CACAAACTTACAAGGCCGATTGATATTGCCTTAATAAATCCAGTTTTTGAGGATATTAAT AACACTGTATTGGCATTTTACCAGTTTGGAGTCCCATCTTTTGAAGAAAAATTACATTTA ATGGCATTACAGCCAATTATTCAAGGATATATTTATGACAATTTGAGGACAAACAAACAA TTAGGATATATTATTTTTGCAAATATTGTTCCTATAAGTAGTACCAGGTTGTTGGTTGTA GGAGTTGAGGGAGACAACAATAATTCAGTTGAAAAAATTGAGTCGATTATACGTAATACA TTATACGAGTTTTCAACCAGAAAGCTAGGAAATATGGAAAGTCACATGTTTGAAGATATT AAAAGCGCATTAATACAAGAAGCAAAATCAATAGGGAATTCATTTAATCAGAAGCTTAAC CATTACTGGGATGAAATTCGTTACGTAGGCGACCTCTCAGAAAGTTTTAATCTACAAAGA GCAATAGATTATATTAATAATAAAATGACTATTGAACACCTCTACAACACATTCAGCAAA CTGATCAATTCTAAAGAACGTACAAGGTCTCATTCAACAATAAAGGCTATTTACTACTCC AAAACCTCACCAGAGTTTAAGAAACAAGAATTTATTGATAAATATATGAACAGTGCGTTG AGCATAGCTCGTATGTCTTTGAAGGAAGACGATTTCTATTAA
  • Download Fasta
  • Fasta :-

    MLCLLLFIIIISINNEISLSCSSSIWKSGYSVLKPKTDDRSYKNITLENGITALLIEDKF SEKAGFTVGIKVGSFNNPVYALGLFHLIEHVLFLGTKKYPAPESYDEFMAQHGGKNNAYT SEERTIYFNEIGEEYLEEGLDRFSHFFIDPLFYENVIEKEIHIINSEHLKNIPNEFDRLF HMLKTHTNKPMSQFTTGNIETLVDIPNKLGISIPRLLKKMYKKYYCGINMFIVLSSKRSL TDQEKLLQKYFSGVLIDNDGQCEFSSLKKEHGILNKSIIDQKYLSKKIHVKSLGGRDLLW LIWSFPARLISPVKQPLIYLSYILNSKQKNSLFWFLQKNNYITNSNSVYENYTFGSIFIY QLELTSEGLKNQFEIIGLIYKYINKLKESKELLKVYQGIRSLTEREFITNTEMLESSPMH STSEICSKMIQYGVHAALSGDILIEDVDENLIYEILNAISPFDTLFLVSDEQEFSGTYEK FFHVKHAIEDIPIKTLNAWKKTKFNEREENEIKLPTPEKCSPINLRIIQEVEDLSTPQRL DSMLANIWWNGPVKKSHKIGIKILLKFPRRYNKGIETQVWGEIITYILDTLIKEKIERYS ECGMSFYIEWDVEGILISIDTFGYSDDIDILLNEIVASEIANISNFDCSILNEIIAELNN SKYAFNSEDTTYSKIMLIIKSLQTNGEYTEWEYRNFINRMFVEIENQNPSKNRHKFISFI LEYTQTILGSSSNKGYNKCELFNSWAYKLLHRQSIIAYLQGNISKNKSLYLIEKFVLNSK ILSLNDKYSMKKKIHKLTRPIDIALINPVFEDINNTVLAFYQFGVPSFEEKLHLMALQPI IQGYIYDNLRTNKQLGYIIFANIVPISSTRLLVVGVEGDNNNSVEKIESIIRNTLYEFST RKLGNMESHMFEDIKSALIQEAKSIGNSFNQKLNHYWDEIRYVGDLSESFNLQRAIDYIN NKMTIEHLYNTFSKLINSKERTRSHSTIKAIYYSKTSPEFKKQEFIDKYMNSALSIARMS LKEDDFY

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cgd1_1680 121 S NAYTSEERT 0.993 unsp cgd1_1680 121 S NAYTSEERT 0.993 unsp cgd1_1680 121 S NAYTSEERT 0.993 unsp cgd1_1680 239 S SSKRSLTDQ 0.996 unsp cgd1_1680 277 S ILNKSIIDQ 0.994 unsp cgd1_1680 285 S QKYLSKKIH 0.992 unsp cgd1_1680 403 T IRSLTEREF 0.993 unsp cgd1_1680 421 S SPMHSTSEI 0.994 unsp cgd1_1680 460 S LNAISPFDT 0.994 unsp cgd1_1680 924 S QEAKSIGNS 0.994 unsp cgd1_1680 978 S KLINSKERT 0.993 unsp cgd1_1680 986 S TRSHSTIKA 0.997 unsp cgd1_1680 997 S YSKTSPEFK 0.996 unsp cgd1_1680 1020 S IARMSLKED 0.998 unsp cgd1_1680 41 S TDDRSYKNI 0.996 unsp cgd1_1680 61 S EDKFSEKAG 0.996 unsp
Showing 1 to 1 of 1 rows

cgd1_1680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India