cgd2_2480 | Methionine aminopeptidase 2

_IDPredictionOTHERSPmTPCS_Position
cgd2_2480OTHER0.9999950.0000000.000005
No Results

  • Fasta :-

    >cgd2_2480 MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKK KKKKGKENLYEDKDDTYDPDLPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIY SRHEFPEGEIIEYNGPNSYRISSEELKDKEKLHILDYASLRRAAEVHRQVRKYMQSIIRP EMKLIDMCNILESKVKELVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIK SYEFEYKSKVYNIKPIKNLNGHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATT GRGYVTEGLDCSHYMKYYDNPFLNENSTRLNSAKILLGGINTHFGTLAFCRRWLDQLGFN KHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_2480.fa Sequence name : cgd2_2480 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 2.349 CoefTot : 0.112 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.888 1.365 0.092 0.532 MesoH : -0.455 0.514 -0.316 0.279 MuHd_075 : 14.258 6.035 4.452 1.961 MuHd_095 : 11.406 5.058 4.031 2.654 MuHd_100 : 15.330 7.133 3.442 2.839 MuHd_105 : 19.708 10.049 4.516 3.418 Hmax_075 : -21.583 -12.017 -7.960 -1.213 Hmax_095 : -23.600 -13.475 -9.023 -1.872 Hmax_100 : -14.700 -8.700 -7.313 -0.860 Hmax_105 : -17.675 -10.675 -8.291 -1.435 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9956 0.0044 DFMC : 0.9863 0.0137
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 cgd2_2480 MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKKKKKKGKENLYEDKDDTYDPD 80 LPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIYSRHEFPEGEIIEYNGPNSYRISSEELKDKEKLHILDYASL 160 RRAAEVHRQVRKYMQSIIRPEMKLIDMCNILESKVKELVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK 240 LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIKSYEFEYKSKVYNIKPIKNLN 320 GHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATTGRGYVTEGLDCSHYMKYYDNPFLNENSTRLNSAKILLGGI 400 NTHFGTLAFCRRWLDQLGFNKHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_2480 9 ENEYNEK|DN 0.069 . cgd2_2480 16 DNQNNGK|EL 0.092 . cgd2_2480 21 GKELGTK|TE 0.058 . cgd2_2480 25 GTKTEQK|TQ 0.059 . cgd2_2480 40 GVLNLDK|PL 0.070 . cgd2_2480 51 IESIDNK|QN 0.066 . cgd2_2480 55 DNKQNNK|KK 0.057 . cgd2_2480 56 NKQNNKK|KK 0.100 . cgd2_2480 57 KQNNKKK|KK 0.142 . cgd2_2480 58 QNNKKKK|KK 0.168 . cgd2_2480 59 NNKKKKK|KK 0.138 . cgd2_2480 60 NKKKKKK|KK 0.152 . cgd2_2480 61 KKKKKKK|KK 0.173 . cgd2_2480 62 KKKKKKK|KK 0.209 . cgd2_2480 63 KKKKKKK|KG 0.122 . cgd2_2480 64 KKKKKKK|GK 0.174 . cgd2_2480 66 KKKKKGK|EN 0.072 . cgd2_2480 73 ENLYEDK|DD 0.063 . cgd2_2480 95 QDNTHLR|KV 0.141 . cgd2_2480 96 DNTHLRK|VC 0.066 . cgd2_2480 107 PAIEFSK|QT 0.069 . cgd2_2480 118 PTVPINK|IY 0.066 . cgd2_2480 122 INKIYSR|HE 0.100 . cgd2_2480 140 NGPNSYR|IS 0.114 . cgd2_2480 147 ISSEELK|DK 0.077 . cgd2_2480 149 SEELKDK|EK 0.070 . cgd2_2480 151 ELKDKEK|LH 0.056 . cgd2_2480 161 LDYASLR|RA 0.103 . cgd2_2480 162 DYASLRR|AA 0.163 . cgd2_2480 168 RAAEVHR|QV 0.169 . cgd2_2480 171 EVHRQVR|KY 0.326 . cgd2_2480 172 VHRQVRK|YM 0.101 . cgd2_2480 179 YMQSIIR|PE 0.089 . cgd2_2480 183 IIRPEMK|LI 0.074 . cgd2_2480 194 CNILESK|VK 0.056 . cgd2_2480 196 ILESKVK|EL 0.073 . cgd2_2480 205 VAAEGLK|CG 0.057 . cgd2_2480 232 NPHDFTK|LT 0.074 . cgd2_2480 240 TQDDICK|LD 0.065 . cgd2_2480 280 ATNTGLK|VA 0.066 . cgd2_2480 300 AIEEVIK|SY 0.077 . cgd2_2480 307 SYEFEYK|SK 0.075 . cgd2_2480 309 EFEYKSK|VY 0.060 . cgd2_2480 314 SKVYNIK|PI 0.072 . cgd2_2480 317 YNIKPIK|NL 0.059 . cgd2_2480 333 YHIHGGK|SV 0.089 . cgd2_2480 345 ATNDDTR|ME 0.095 . cgd2_2480 362 TFATTGR|GY 0.105 . cgd2_2480 376 DCSHYMK|YY 0.074 . cgd2_2480 389 LNENSTR|LN 0.112 . cgd2_2480 394 TRLNSAK|IL 0.101 . cgd2_2480 411 GTLAFCR|RW 0.092 . cgd2_2480 412 TLAFCRR|WL 0.239 . cgd2_2480 421 DQLGFNK|HA 0.063 . cgd2_2480 427 KHALALK|SL 0.087 . cgd2_2480 436 VDSEIIR|PY 0.084 . cgd2_2480 459 EHTILLR|PS 0.075 . cgd2_2480 463 LLRPSCK|EV 0.082 . cgd2_2480 468 CKEVVSR|GD 0.111 . ____________________________^_________________

  • Fasta :-

    >cgd2_2480 ATGAGTGAAAATGAATATAATGAAAAAGATAATCAGAATAATGGAAAAGAATTGGGAACT AAAACTGAACAAAAAACTCAGCTTCTACTCGAAGAATCAGGTGTTTTAAATCTTGATAAA CCTCTAAATGAGATAGAATCTATTGACAATAAACAAAATAATAAAAAGAAAAAAAAGAAA AAGAAAAAAAAAGGAAAGGAAAACCTATACGAAGATAAAGATGATACTTATGATCCAGAT CTTCCTACTTATTCAATTCCTATACAAGATAACACCCATCTGAGAAAAGTTTGCAACTGG CCAGCTATTGAATTTAGCAAACAAACATCTCCTCCAACTGTGCCTATAAATAAAATTTAC TCAAGACATGAATTTCCAGAGGGCGAAATAATTGAATATAATGGGCCTAACTCATATAGA ATATCGTCTGAAGAATTAAAAGATAAAGAAAAACTCCATATTTTGGACTACGCCTCTTTA AGAAGAGCAGCAGAGGTACATAGACAAGTTCGAAAATATATGCAGAGTATCATTCGACCA GAGATGAAACTTATAGATATGTGTAATATTTTAGAGAGTAAAGTGAAAGAATTAGTTGCT GCAGAAGGGCTCAAGTGTGGATGGGGATTTCCAACAGGATGTTCGCTTAATCATTGTGCG GCACACTACACTCCAAACCCCCATGACTTTACAAAATTAACCCAAGATGACATTTGTAAA TTAGACTTTGGTGTACAGGTTAATGGAATGATAATTGACTGTGCTTTTACCGTTGCATTC AATGATGTTTTTGACCCTTTAATTCAATCTACATTAGATGCAACAAATACAGGATTAAAA GTTGCCGGAATTGATGTTATGTTTTCTGAAATAGGCTCAGCTATAGAAGAAGTCATTAAA TCTTATGAATTTGAGTACAAAAGTAAGGTTTATAATATTAAACCTATTAAAAATCTAAAT GGTCATTCAATTCTACCATATCATATCCATGGAGGGAAATCAGTACCAATTATTGCAACA AATGATGACACAAGAATGGAGGAAAATGAAATATATGCCATCGAAACATTTGCAACCACT GGAAGAGGCTACGTTACAGAAGGGCTAGATTGTAGCCACTATATGAAATACTATGACAAT CCCTTCCTAAACGAAAATTCAACCAGACTTAATTCTGCTAAAATTCTTCTTGGTGGAATT AATACCCATTTCGGTACACTTGCGTTCTGTAGAAGATGGTTGGACCAATTAGGATTTAAT AAGCATGCACTAGCTCTTAAATCATTGGTAGACTCGGAAATCATTCGGCCGTATCCTCCA TTAAACGACATTCCGGGTTCATTCTCCTCTCAAATGGAACACACCATTTTATTAAGGCCT TCTTGTAAAGAGGTTGTATCTAGAGGTGATGACTTTTAA
  • Download Fasta

  • Fasta :-

    MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKK KKKKGKENLYEDKDDTYDPDLPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIY SRHEFPEGEIIEYNGPNSYRISSEELKDKEKLHILDYASLRRAAEVHRQVRKYMQSIIRP EMKLIDMCNILESKVKELVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIK SYEFEYKSKVYNIKPIKNLNGHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATT GRGYVTEGLDCSHYMKYYDNPFLNENSTRLNSAKILLGGINTHFGTLAFCRRWLDQLGFN KHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF

    No Results
  • title: active site
  • coordinates: H222,D242,D253,H322,E355,E453
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd2_2480142 SSYRISSEEL0.994unspcgd2_2480461 SLLRPSCKEV0.997unsp

cgd2_2480      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India