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_ID
Prediction
OTHER
SP
mTP
CS_Position
cgd2_360 OTHER 0.999600 0.000221 0.000179
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >cgd2_360 MFKVTREELGEDIDLLEYLSDSTYDGEETEEYISKRCNTIEEPLTLSDSFSKSFVIFGLP CIGSDKYERFLKALRTIINQTLKMMRVEYDENFLLDVPQDVDGSTKGVAILTFSNSFQAE TVCQALSKAPFDKQTKFNTVMFDDVKRIIEQDESAPGHFETLYPPPTLFSRDDVRNWLMG PRCREQFVIRYQSATEIYSFDSIQRIPELIYDGERAKGGKRVWTDFSVQWSPMGSYLVTF HRQGVALWGGDDWDKKIRFEHKDVKFIDFSPNEEYLLTWDGSSPDSRFDKAVKVWHVLSG RLLRCFSTPTMTLNNNGTDSGLHFLWSPTGNYLAHCSDKGELFVYESSTMTLVEDPATGN KNPLKYPLQFFDWSPEEDNLSIWCPERGDTPGRLTLLSIKNRKELAIKNVFNVREASVHW QPKGQYMCLKALVSRKAGKKAKKEYTQLEIFRVKEKNVPVDTVHIEGVTVKCLSWESSNR FAIVVVDDVTRSQTLRFYQVNATQTDFVCSYYLTSPVDTIKWSPLGSYFVLGGSGGNLTF CQLTNENKFDILQKDEHFMCNWIQWDPTGRYVTTAFQSKLAEGAYKYSTETGFIVWSFQG RQLYNSPLETFYQFIWRPHPPSLLSQEKFDEIPRKLKDYSKKFDAEDEAVRSEKRNIVLQ KRKVNEDEFNAILQKIQEWKVQQPLYKEWLAAKEVLLNSLQWEEQEEVIEIELETIQEVI STEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_360.fa Sequence name : cgd2_360 Sequence length : 724 VALUES OF COMPUTED PARAMETERS Coef20 : 3.415 CoefTot : 0.022 ChDiff : -20 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.124 0.197 0.504 MesoH : -0.330 0.213 -0.280 0.184 MuHd_075 : 32.313 14.125 9.400 4.051 MuHd_095 : 31.496 19.927 8.114 5.579 MuHd_100 : 33.544 20.422 8.615 5.601 MuHd_105 : 26.749 15.880 7.051 4.147 Hmax_075 : 2.333 8.400 -0.302 3.395 Hmax_095 : -0.350 9.188 -1.535 3.281 Hmax_100 : 7.800 12.600 0.394 4.490 Hmax_105 : 4.783 11.667 -0.105 4.142 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9263 0.0737 DFMC : 0.8778 0.1222
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 724 cgd2_360 MFKVTREELGEDIDLLEYLSDSTYDGEETEEYISKRCNTIEEPLTLSDSFSKSFVIFGLPCIGSDKYERFLKALRTIINQ 80 TLKMMRVEYDENFLLDVPQDVDGSTKGVAILTFSNSFQAETVCQALSKAPFDKQTKFNTVMFDDVKRIIEQDESAPGHFE 160 TLYPPPTLFSRDDVRNWLMGPRCREQFVIRYQSATEIYSFDSIQRIPELIYDGERAKGGKRVWTDFSVQWSPMGSYLVTF 240 HRQGVALWGGDDWDKKIRFEHKDVKFIDFSPNEEYLLTWDGSSPDSRFDKAVKVWHVLSGRLLRCFSTPTMTLNNNGTDS 320 GLHFLWSPTGNYLAHCSDKGELFVYESSTMTLVEDPATGNKNPLKYPLQFFDWSPEEDNLSIWCPERGDTPGRLTLLSIK 400 NRKELAIKNVFNVREASVHWQPKGQYMCLKALVSRKAGKKAKKEYTQLEIFRVKEKNVPVDTVHIEGVTVKCLSWESSNR 480 FAIVVVDDVTRSQTLRFYQVNATQTDFVCSYYLTSPVDTIKWSPLGSYFVLGGSGGNLTFCQLTNENKFDILQKDEHFMC 560 NWIQWDPTGRYVTTAFQSKLAEGAYKYSTETGFIVWSFQGRQLYNSPLETFYQFIWRPHPPSLLSQEKFDEIPRKLKDYS 640 KKFDAEDEAVRSEKRNIVLQKRKVNEDEFNAILQKIQEWKVQQPLYKEWLAAKEVLLNSLQWEEQEEVIEIELETIQEVI 720 STEV 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_360 3 ----MFK|VT 0.067 . cgd2_360 6 -MFKVTR|EE 0.074 . cgd2_360 35 TEEYISK|RC 0.070 . cgd2_360 36 EEYISKR|CN 0.235 . cgd2_360 52 LSDSFSK|SF 0.068 . cgd2_360 66 PCIGSDK|YE 0.056 . cgd2_360 69 GSDKYER|FL 0.105 . cgd2_360 72 KYERFLK|AL 0.167 . cgd2_360 75 RFLKALR|TI 0.073 . cgd2_360 83 IINQTLK|MM 0.063 . cgd2_360 86 QTLKMMR|VE 0.075 . cgd2_360 106 DVDGSTK|GV 0.074 . cgd2_360 128 VCQALSK|AP 0.072 . cgd2_360 133 SKAPFDK|QT 0.081 . cgd2_360 136 PFDKQTK|FN 0.066 . cgd2_360 146 VMFDDVK|RI 0.060 . cgd2_360 147 MFDDVKR|II 0.245 . cgd2_360 171 PPTLFSR|DD 0.087 . cgd2_360 175 FSRDDVR|NW 0.089 . cgd2_360 182 NWLMGPR|CR 0.075 . cgd2_360 184 LMGPRCR|EQ 0.095 . cgd2_360 190 REQFVIR|YQ 0.131 . cgd2_360 205 SFDSIQR|IP 0.080 . cgd2_360 215 LIYDGER|AK 0.095 . cgd2_360 217 YDGERAK|GG 0.067 . cgd2_360 220 ERAKGGK|RV 0.085 . cgd2_360 221 RAKGGKR|VW 0.133 . cgd2_360 242 YLVTFHR|QG 0.077 . cgd2_360 255 GGDDWDK|KI 0.060 . cgd2_360 256 GDDWDKK|IR 0.085 . cgd2_360 258 DWDKKIR|FE 0.099 . cgd2_360 262 KIRFEHK|DV 0.107 . cgd2_360 265 FEHKDVK|FI 0.079 . cgd2_360 287 GSSPDSR|FD 0.145 . cgd2_360 290 PDSRFDK|AV 0.260 . cgd2_360 293 RFDKAVK|VW 0.056 . cgd2_360 301 WHVLSGR|LL 0.070 . cgd2_360 304 LSGRLLR|CF 0.322 . cgd2_360 339 LAHCSDK|GE 0.067 . cgd2_360 361 DPATGNK|NP 0.056 . cgd2_360 365 GNKNPLK|YP 0.078 . cgd2_360 387 SIWCPER|GD 0.122 . cgd2_360 393 RGDTPGR|LT 0.079 . cgd2_360 400 LTLLSIK|NR 0.050 . cgd2_360 402 LLSIKNR|KE 0.101 . cgd2_360 403 LSIKNRK|EL 0.082 . cgd2_360 408 RKELAIK|NV 0.080 . cgd2_360 414 KNVFNVR|EA 0.099 . cgd2_360 423 SVHWQPK|GQ 0.086 . cgd2_360 430 GQYMCLK|AL 0.065 . cgd2_360 435 LKALVSR|KA 0.159 . cgd2_360 436 KALVSRK|AG 0.083 . cgd2_360 439 VSRKAGK|KA 0.086 . cgd2_360 440 SRKAGKK|AK 0.102 . cgd2_360 442 KAGKKAK|KE 0.088 . cgd2_360 443 AGKKAKK|EY 0.113 . cgd2_360 452 TQLEIFR|VK 0.092 . cgd2_360 454 LEIFRVK|EK 0.063 . cgd2_360 456 IFRVKEK|NV 0.076 . cgd2_360 471 IEGVTVK|CL 0.070 . cgd2_360 480 SWESSNR|FA 0.137 . cgd2_360 491 VVDDVTR|SQ 0.090 . cgd2_360 496 TRSQTLR|FY 0.143 . cgd2_360 521 SPVDTIK|WS 0.061 . cgd2_360 548 QLTNENK|FD 0.060 . cgd2_360 554 KFDILQK|DE 0.065 . cgd2_360 570 QWDPTGR|YV 0.160 . cgd2_360 579 TTAFQSK|LA 0.081 . cgd2_360 586 LAEGAYK|YS 0.074 . cgd2_360 601 VWSFQGR|QL 0.115 . cgd2_360 617 FYQFIWR|PH 0.089 . cgd2_360 628 SLLSQEK|FD 0.067 . cgd2_360 634 KFDEIPR|KL 0.071 . cgd2_360 635 FDEIPRK|LK 0.080 . cgd2_360 637 EIPRKLK|DY 0.238 . cgd2_360 641 KLKDYSK|KF 0.068 . cgd2_360 642 LKDYSKK|FD 0.121 . cgd2_360 651 AEDEAVR|SE 0.081 . cgd2_360 654 EAVRSEK|RN 0.107 . cgd2_360 655 AVRSEKR|NI 0.133 . cgd2_360 661 RNIVLQK|RK 0.061 . cgd2_360 662 NIVLQKR|KV 0.228 . cgd2_360 663 IVLQKRK|VN 0.092 . cgd2_360 675 FNAILQK|IQ 0.067 . cgd2_360 680 QKIQEWK|VQ 0.061 . cgd2_360 687 VQQPLYK|EW 0.066 . cgd2_360 693 KEWLAAK|EV 0.063 . ____________________________^_________________
  • Fasta :-

    >cgd2_360 AGAAGATTTATTAAAAAGTTTGAAATATACTCTGGTTCTAATACTTGGGTATATAAAATA CACTTATATACTAGAATAATCTAAGCTCTAACTATTAGTAACTTCTAGAATTGAAGAGGG AAATATATGCATATGAATTATGTTTAAAGTTACTCGTGAAGAATTAGGTGAAGATATTGA TCTTTTGGAGTATTTAAGTGACTCCACATATGATGGGGAGGAAACTGAAGAATATATTTC CAAGAGATGTAATACAATAGAAGAACCACTGACTTTATCAGACTCATTTTCTAAAAGCTT TGTTATTTTCGGACTTCCATGTATTGGCTCAGATAAATATGAGAGATTTCTTAAAGCTCT TAGAACAATTATTAATCAAACCCTTAAAATGATGAGAGTGGAGTATGACGAAAATTTTTT ACTTGATGTACCTCAGGATGTAGATGGAAGCACAAAAGGAGTTGCTATATTGACATTTTC GAATTCATTCCAAGCAGAAACTGTTTGCCAAGCACTTTCAAAGGCACCATTTGATAAACA GACAAAATTTAATACAGTAATGTTTGATGATGTAAAAAGAATTATTGAACAAGATGAATC AGCTCCAGGACATTTTGAAACTCTATACCCACCACCGACTTTATTCAGTCGAGATGATGT AAGAAATTGGTTAATGGGGCCAAGGTGTAGAGAACAATTTGTTATTAGATACCAAAGCGC AACTGAGATCTATTCATTTGATTCTATTCAAAGAATTCCTGAATTAATTTATGACGGTGA AAGAGCTAAAGGAGGAAAAAGAGTTTGGACAGATTTTTCTGTGCAATGGAGTCCAATGGG TTCTTACTTAGTGACATTCCATCGTCAGGGTGTTGCACTTTGGGGAGGTGATGATTGGGA TAAGAAGATTAGATTTGAACACAAAGATGTTAAATTCATTGATTTCAGCCCAAATGAAGA ATATTTATTAACATGGGATGGTTCTTCTCCAGATTCAAGGTTTGATAAGGCAGTAAAAGT ATGGCATGTACTTTCTGGACGACTTTTAAGATGCTTTTCCACACCAACTATGACACTTAA CAATAATGGAACTGATAGTGGTTTACATTTCCTTTGGAGTCCAACTGGAAATTATCTTGC ACATTGCTCCGATAAAGGAGAACTTTTTGTCTATGAATCTTCCACAATGACTCTTGTAGA AGATCCTGCTACAGGTAATAAGAACCCATTAAAGTATCCACTTCAGTTCTTTGATTGGTC CCCTGAAGAAGACAACCTTTCAATTTGGTGTCCAGAAAGAGGAGATACACCAGGTAGACT TACTTTGCTTTCTATTAAGAATAGAAAAGAGTTGGCAATAAAGAATGTCTTTAATGTTAG AGAGGCATCTGTCCACTGGCAACCAAAAGGTCAGTATATGTGTCTTAAGGCTCTAGTTTC TAGAAAAGCTGGTAAAAAGGCAAAAAAAGAATATACTCAGCTTGAGATCTTTAGAGTAAA AGAGAAAAATGTTCCTGTTGATACTGTACATATTGAAGGTGTTACTGTCAAGTGCTTATC CTGGGAATCATCTAATAGATTTGCCATTGTTGTTGTAGATGATGTTACAAGATCCCAAAC ACTGAGATTTTACCAAGTGAATGCAACACAAACTGACTTTGTATGCTCATATTATTTAAC ATCTCCTGTTGACACAATTAAATGGAGTCCACTTGGTAGCTATTTTGTTTTAGGTGGATC TGGAGGAAATTTAACATTCTGTCAGCTCACAAATGAAAACAAATTTGATATCTTGCAAAA AGATGAGCATTTTATGTGTAACTGGATTCAATGGGATCCTACCGGTAGATATGTTACAAC AGCTTTCCAATCAAAGTTAGCTGAAGGTGCATATAAATACAGCACAGAAACAGGTTTCAT AGTTTGGTCTTTCCAAGGCAGACAACTTTACAACTCACCATTGGAGACATTTTACCAATT TATTTGGAGGCCTCATCCCCCTTCACTTCTTTCACAAGAAAAGTTTGATGAAATTCCTAG AAAACTTAAAGATTACAGCAAAAAGTTTGATGCTGAAGATGAGGCTGTCAGATCTGAAAA GAGAAATATTGTTCTCCAAAAGAGAAAAGTCAACGAGGATGAATTCAATGCTATTCTCCA AAAGATTCAAGAATGGAAGGTTCAGCAACCACTTTACAAAGAATGGCTTGCAGCAAAAGA AGTCCTACTTAATTCCTTACAATGGGAAGAACAAGAAGAAGTTATCGAGATTGAGCTTGA AACTATCCAGGAAGTTATTTCCACTGAGGTTTAGAAATGAGGCTATTCTATTTGTTTTCA TACTTCCTACAATACATATCTACTTTAGTTTATATCATTCATTTCACTATATAGTATTTT TATAGTATTCACTAATTAGCTTATTATT
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  • Fasta :-

    MFKVTREELGEDIDLLEYLSDSTYDGEETEEYISKRCNTIEEPLTLSDSFSKSFVIFGLP CIGSDKYERFLKALRTIINQTLKMMRVEYDENFLLDVPQDVDGSTKGVAILTFSNSFQAE TVCQALSKAPFDKQTKFNTVMFDDVKRIIEQDESAPGHFETLYPPPTLFSRDDVRNWLMG PRCREQFVIRYQSATEIYSFDSIQRIPELIYDGERAKGGKRVWTDFSVQWSPMGSYLVTF HRQGVALWGGDDWDKKIRFEHKDVKFIDFSPNEEYLLTWDGSSPDSRFDKAVKVWHVLSG RLLRCFSTPTMTLNNNGTDSGLHFLWSPTGNYLAHCSDKGELFVYESSTMTLVEDPATGN KNPLKYPLQFFDWSPEEDNLSIWCPERGDTPGRLTLLSIKNRKELAIKNVFNVREASVHW QPKGQYMCLKALVSRKAGKKAKKEYTQLEIFRVKEKNVPVDTVHIEGVTVKCLSWESSNR FAIVVVDDVTRSQTLRFYQVNATQTDFVCSYYLTSPVDTIKWSPLGSYFVLGGSGGNLTF CQLTNENKFDILQKDEHFMCNWIQWDPTGRYVTTAFQSKLAEGAYKYSTETGFIVWSFQG RQLYNSPLETFYQFIWRPHPPSLLSQEKFDEIPRKLKDYSKKFDAEDEAVRSEKRNIVLQ KRKVNEDEFNAILQKIQEWKVQQPLYKEWLAAKEVLLNSLQWEEQEEVIEIELETIQEVI STEV

  • title: WD40 repeat
  • coordinates: F226-H261
No Results
No Results
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
cgd2_360 515 S YYLTSPVDT 0.99 unsp cgd2_360 515 S YYLTSPVDT 0.99 unsp cgd2_360 515 S YYLTSPVDT 0.99 unsp cgd2_360 606 S QLYNSPLET 0.996 unsp cgd2_360 652 S EAVRSEKRN 0.993 unsp cgd2_360 22 S YLSDSTYDG 0.997 unsp cgd2_360 286 S SSPDSRFDK 0.996 unsp
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cgd2_360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India