cgd2_710 | Predicted protease

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_IDPredictionOTHERSPmTPCS_Position
cgd2_710OTHER0.9999480.0000080.000043
No Results

  • Fasta :-

    >cgd2_710 MNGELNKTQYNTNIKTTNTDYFDQMENISGSNVRGRLTYSDLHVKDSFSHAYSNNNITRC SSNYREENFDRDSGSNMVILNVYDLDAISGSINRFTRVFELGAFHAGIEIYGVEYCFGST SDGSSGITVNLPRRHPIHIYRESVKMGRTNYSRGEIKRIINEMKPLWLGSDYNIFRRNCL TFADELCMVLNVGQIPNYVKLLPELLCQAGDGLDKVTKHISTIFDRIASNCSNLAIVESE QEEKNDQSTTNSSGMSPKKFPFGIKNPLL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_710.fa Sequence name : cgd2_710 Sequence length : 269 VALUES OF COMPUTED PARAMETERS Coef20 : 3.298 CoefTot : -1.569 ChDiff : -2 ZoneTo : 19 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.459 1.218 0.015 0.530 MesoH : -0.760 0.294 -0.377 0.177 MuHd_075 : 4.951 10.926 2.495 3.029 MuHd_095 : 20.954 8.145 4.935 2.601 MuHd_100 : 15.388 4.432 3.467 1.508 MuHd_105 : 9.906 3.609 1.969 1.084 Hmax_075 : -7.583 1.750 -4.044 1.307 Hmax_095 : 1.838 -3.400 -2.953 0.000 Hmax_100 : 0.900 -3.400 -3.292 -0.250 Hmax_105 : -8.050 -6.183 -5.042 -0.175 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9917 0.0083 DFMC : 0.9895 0.0105
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 269 cgd2_710 MNGELNKTQYNTNIKTTNTDYFDQMENISGSNVRGRLTYSDLHVKDSFSHAYSNNNITRCSSNYREENFDRDSGSNMVIL 80 NVYDLDAISGSINRFTRVFELGAFHAGIEIYGVEYCFGSTSDGSSGITVNLPRRHPIHIYRESVKMGRTNYSRGEIKRII 160 NEMKPLWLGSDYNIFRRNCLTFADELCMVLNVGQIPNYVKLLPELLCQAGDGLDKVTKHISTIFDRIASNCSNLAIVESE 240 QEEKNDQSTTNSSGMSPKKFPFGIKNPLL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_710 7 MNGELNK|TQ 0.056 . cgd2_710 15 QYNTNIK|TT 0.064 . cgd2_710 34 ISGSNVR|GR 0.084 . cgd2_710 36 GSNVRGR|LT 0.131 . cgd2_710 45 YSDLHVK|DS 0.064 . cgd2_710 59 SNNNITR|CS 0.129 . cgd2_710 65 RCSSNYR|EE 0.086 . cgd2_710 71 REENFDR|DS 0.130 . cgd2_710 94 ISGSINR|FT 0.101 . cgd2_710 97 SINRFTR|VF 0.347 . cgd2_710 133 ITVNLPR|RH 0.071 . cgd2_710 134 TVNLPRR|HP 0.139 . cgd2_710 141 HPIHIYR|ES 0.113 . cgd2_710 145 IYRESVK|MG 0.066 . cgd2_710 148 ESVKMGR|TN 0.080 . cgd2_710 153 GRTNYSR|GE 0.089 . cgd2_710 157 YSRGEIK|RI 0.067 . cgd2_710 158 SRGEIKR|II 0.256 . cgd2_710 164 RIINEMK|PL 0.070 . cgd2_710 176 SDYNIFR|RN 0.081 . cgd2_710 177 DYNIFRR|NC 0.106 . cgd2_710 200 QIPNYVK|LL 0.060 . cgd2_710 215 AGDGLDK|VT 0.058 . cgd2_710 218 GLDKVTK|HI 0.094 . cgd2_710 226 ISTIFDR|IA 0.097 . cgd2_710 244 ESEQEEK|ND 0.057 . cgd2_710 258 SSGMSPK|KF 0.075 . cgd2_710 259 SGMSPKK|FP 0.117 . cgd2_710 265 KFPFGIK|NP 0.054 . ____________________________^_________________

  • Fasta :-

    >cgd2_710 CTCGAATAGAGATTTTTTTTTTTTTTCTCCTTCCCATGGATAAATCAGAAATATTAAATA ATATCAGTTTTAGTAAATTAGGCAATTAATTTCAATAATTATTTGGGTAAAACAATGAAT GGAGAATTGAATAAAACCCAATATAATACAAATATAAAAACAACAAATACAGATTATTTT GACCAAATGGAGAATATTTCAGGATCAAATGTAAGAGGACGCTTGACTTACTCTGATTTA CATGTCAAGGATAGCTTCTCGCATGCATATAGTAATAATAATATTACCAGATGTTCATCA AATTATAGAGAAGAAAACTTTGACAGAGATTCTGGTAGCAACATGGTAATTCTTAATGTA TATGATTTAGATGCAATTAGTGGAAGTATTAATAGATTTACAAGAGTATTCGAATTGGGA GCTTTTCATGCAGGAATTGAAATTTATGGAGTAGAATACTGTTTTGGATCAACTAGTGAT GGAAGTAGTGGTATCACAGTAAATCTTCCAAGAAGGCATCCAATACATATCTATAGAGAA AGTGTTAAGATGGGTAGAACTAACTATTCTAGGGGAGAAATTAAGAGAATTATTAACGAA ATGAAGCCTTTATGGCTTGGTTCAGATTATAATATATTCAGGAGAAATTGTTTAACTTTT GCTGACGAACTTTGTATGGTTCTAAATGTTGGACAAATTCCAAATTATGTCAAACTTCTC CCTGAACTTCTTTGTCAAGCTGGAGATGGACTTGACAAAGTCACCAAACATATTTCAACA ATTTTTGACCGTATTGCCTCTAATTGTTCTAATCTTGCAATCGTTGAAAGCGAACAAGAA GAAAAAAATGATCAATCAACGACTAATTCCTCAGGAATGTCGCCCAAAAAATTTCCTTTT GGAATTAAAAATCCCCTTTTATAAATATTCCTTGTTACAAGCGCATTAATTAATGACATT GGCGCCCAATGTGG
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  • Fasta :-

    MNGELNKTQYNTNIKTTNTDYFDQMENISGSNVRGRLTYSDLHVKDSFSHAYSNNNITRC SSNYREENFDRDSGSNMVILNVYDLDAISGSINRFTRVFELGAFHAGIEIYGVEYCFGST SDGSSGITVNLPRRHPIHIYRESVKMGRTNYSRGEIKRIINEMKPLWLGSDYNIFRRNCL TFADELCMVLNVGQIPNYVKLLPELLCQAGDGLDKVTKHISTIFDRIASNCSNLAIVESE QEEKNDQSTTNSSGMSPKKFPFGIKNPLL

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd2_71062 STRCSSNYRE0.991unspcgd2_710256 SSSGMSPKKF0.995unsp

cgd2_710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India