cgd3_2160 | SprT-like protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd3_2160OTHER0.9996980.0001220.000180
No Results

  • Fasta :-

    >cgd3_2160 MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELRETILHELIHAYLFVTSNDRDRNFHGK EFCFHMNRINKMSGLNITIYHNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPG PADSWWNFHRKTCGGCFVKEAKTLPQINNLESLGTRPNGQTSSPNMHQDDILEIIEISD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_2160.fa Sequence name : cgd3_2160 Sequence length : 179 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : -0.257 ChDiff : 5 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.141 0.729 -0.020 0.349 MesoH : -1.674 -0.266 -0.639 -0.026 MuHd_075 : 23.570 16.615 8.123 4.786 MuHd_095 : 33.076 10.227 8.259 6.023 MuHd_100 : 25.468 4.288 5.796 4.734 MuHd_105 : 16.477 2.386 3.493 3.474 Hmax_075 : 14.700 16.400 6.004 4.610 Hmax_095 : 13.562 9.975 5.655 4.594 Hmax_100 : 12.600 6.600 3.766 4.150 Hmax_105 : 10.733 10.150 3.890 4.678 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7175 0.2825 DFMC : 0.8598 0.1402
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 179 cgd3_2160 MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELRETILHELIHAYLFVTSNDRDRNFHGKEFCFHMNRINKMSGLNITIY 80 HNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPGPADSWWNFHRKTCGGCFVKEAKTLPQINNLESLGTRPNGQ 160 TSSPNMHQDDILEIIEISD 240 ................................................................................ 80 ................................................................................ 160 ................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_2160 7 MTLCAGK|CT 0.060 . cgd3_2160 15 TYETGGR|CI 0.066 . cgd3_2160 26 LSEPLLK|YR 0.072 . cgd3_2160 28 EPLLKYR|SV 0.212 . cgd3_2160 31 LKYRSVK|EL 0.163 . cgd3_2160 34 RSVKELR|ET 0.093 . cgd3_2160 53 FVTSNDR|DR 0.073 . cgd3_2160 55 TSNDRDR|NF 0.156 . cgd3_2160 60 DRNFHGK|EF 0.079 . cgd3_2160 68 FCFHMNR|IN 0.076 . cgd3_2160 71 HMNRINK|MS 0.173 . cgd3_2160 91 DELNYYR|RY 0.069 . cgd3_2160 92 ELNYYRR|YI 0.184 . cgd3_2160 96 YRRYIWR|CD 0.143 . cgd3_2160 102 RCDGVCR|NH 0.079 . cgd3_2160 112 PYYGYVR|RS 0.072 . cgd3_2160 113 YYGYVRR|SI 0.270 . cgd3_2160 117 VRRSINR|KP 0.113 . cgd3_2160 118 RRSINRK|PG 0.090 . cgd3_2160 130 SWWNFHR|KT 0.128 . cgd3_2160 131 WWNFHRK|TC 0.131 . cgd3_2160 139 CGGCFVK|EA 0.065 . cgd3_2160 142 CFVKEAK|TL 0.069 . cgd3_2160 156 LESLGTR|PN 0.092 . ____________________________^_________________

  • Fasta :-

    >cgd3_2160 TTATTAAATAAAGTATTGCAAAAAAAAATAATCAATCAATTCAACTCGCGAGACGAAGAC TTAGCTAGTGGCTTCCCTGACATTCATGAACTCCTTTTAGAGTACAATGACCTATATTTC TTTGGGTCTCTCGGCTCTGTGATAATCAGATGGAGCAATAGAATGACATTGTGCGCAGGT AAATGTACATATGAAACTGGAGGGAGATGCATCGTCAGCCTTTCAGAGCCACTACTAAAG TATAGATCCGTTAAAGAGCTAAGAGAGACAATTTTGCATGAGCTTATTCATGCTTATTTG TTTGTGACATCAAACGATAGAGATAGAAATTTTCACGGGAAGGAGTTCTGCTTTCATATG AACAGAATAAACAAAATGTCTGGCCTAAACATTACTATTTATCACAACTTCCATGATGAA TTGAACTATTATAGAAGGTATATCTGGCGTTGCGATGGTGTTTGTAGAAATCACCCACCC TACTATGGATACGTTCGACGTTCGATCAACAGAAAGCCAGGCCCAGCAGATTCTTGGTGG AATTTTCATAGAAAAACATGTGGAGGTTGTTTTGTCAAGGAGGCCAAAACATTACCTCAA ATAAATAATTTGGAGTCACTGGGCACAAGGCCTAACGGCCAGACTTCTAGTCCAAATATG CATCAAGATGATATATTGGAAATTATAGAAATTAGCGACTAG
  • Download Fasta

  • Fasta :-

    MTLCAGKCTYETGGRCIVSLSEPLLKYRSVKELRETILHELIHAYLFVTSNDRDRNFHGK EFCFHMNRINKMSGLNITIYHNFHDELNYYRRYIWRCDGVCRNHPPYYGYVRRSINRKPG PADSWWNFHRKTCGGCFVKEAKTLPQINNLESLGTRPNGQTSSPNMHQDDILEIIEISD

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
cgd3_216029 SLKYRSVKEL0.996unsp

cgd3_2160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India