cgd3_2190 | UBA-like/Ubiquitin-associated/Aspartic peptidase domain containing protein

_IDPredictionOTHERSPmTPCS_Position
cgd3_2190OTHER0.9996540.0003040.000042
No Results

  • Fasta :-

    >cgd3_2190 MKVNIFYSVTGELISVEIHEETTVEVLKSLIEIELNLDSFKNYELSIEGKILKNDGFVLS DIVNEGSIFVLSEKTNKNTFENSNFSLNDRENLIQLLSKELFTKIKEDQSLKSVYYSKSS KYRDSIDKDDIKSFTELIKNDYFSGNLNSISSSSNSSSNLYNLDPLSPEYQRLIEEQVRK QNVEENLILAQDHLPESFTQVHMLYINAEVNGISIKAFVDSGAQTTIMSKKCAEKCNLVR LIDYRFSGIAQGVGTSKIVGKIHVAQMKIGNSFFPFSITVLEESHVDFLFGLDLLKRYQC CIDLHQNALIIGDEKVQFLSESEINSEISQINSNNEYDQCFEQGKKLQLLSLGFSESQVI NALRATNGNTELAASLLFSNETFE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_2190.fa Sequence name : cgd3_2190 Sequence length : 384 VALUES OF COMPUTED PARAMETERS Coef20 : 3.635 CoefTot : -0.542 ChDiff : -19 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.776 1.241 -0.033 0.512 MesoH : -0.493 0.466 -0.352 0.247 MuHd_075 : 27.543 15.877 7.965 3.916 MuHd_095 : 7.217 10.511 2.545 2.503 MuHd_100 : 6.002 8.016 2.069 1.807 MuHd_105 : 3.635 8.209 1.209 1.469 Hmax_075 : 17.617 21.000 3.030 6.557 Hmax_095 : 12.775 12.250 2.329 4.909 Hmax_100 : 5.500 12.100 0.366 4.570 Hmax_105 : 7.300 17.850 0.688 4.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9622 0.0378 DFMC : 0.9436 0.0564
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 384 cgd3_2190 MKVNIFYSVTGELISVEIHEETTVEVLKSLIEIELNLDSFKNYELSIEGKILKNDGFVLSDIVNEGSIFVLSEKTNKNTF 80 ENSNFSLNDRENLIQLLSKELFTKIKEDQSLKSVYYSKSSKYRDSIDKDDIKSFTELIKNDYFSGNLNSISSSSNSSSNL 160 YNLDPLSPEYQRLIEEQVRKQNVEENLILAQDHLPESFTQVHMLYINAEVNGISIKAFVDSGAQTTIMSKKCAEKCNLVR 240 LIDYRFSGIAQGVGTSKIVGKIHVAQMKIGNSFFPFSITVLEESHVDFLFGLDLLKRYQCCIDLHQNALIIGDEKVQFLS 320 ESEINSEISQINSNNEYDQCFEQGKKLQLLSLGFSESQVINALRATNGNTELAASLLFSNETFE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_2190 2 -----MK|VN 0.059 . cgd3_2190 28 TTVEVLK|SL 0.094 . cgd3_2190 41 LNLDSFK|NY 0.066 . cgd3_2190 50 ELSIEGK|IL 0.070 . cgd3_2190 53 IEGKILK|ND 0.071 . cgd3_2190 74 IFVLSEK|TN 0.056 . cgd3_2190 77 LSEKTNK|NT 0.062 . cgd3_2190 90 NFSLNDR|EN 0.089 . cgd3_2190 99 LIQLLSK|EL 0.069 . cgd3_2190 104 SKELFTK|IK 0.068 . cgd3_2190 106 ELFTKIK|ED 0.060 . cgd3_2190 112 KEDQSLK|SV 0.091 . cgd3_2190 118 KSVYYSK|SS 0.068 . cgd3_2190 121 YYSKSSK|YR 0.075 . cgd3_2190 123 SKSSKYR|DS 0.242 . cgd3_2190 128 YRDSIDK|DD 0.074 . cgd3_2190 132 IDKDDIK|SF 0.075 . cgd3_2190 139 SFTELIK|ND 0.059 . cgd3_2190 172 LSPEYQR|LI 0.094 . cgd3_2190 179 LIEEQVR|KQ 0.083 . cgd3_2190 180 IEEQVRK|QN 0.077 . cgd3_2190 216 VNGISIK|AF 0.073 . cgd3_2190 230 QTTIMSK|KC 0.053 . cgd3_2190 231 TTIMSKK|CA 0.168 . cgd3_2190 235 SKKCAEK|CN 0.061 . cgd3_2190 240 EKCNLVR|LI 0.090 . cgd3_2190 245 VRLIDYR|FS 0.134 . cgd3_2190 257 QGVGTSK|IV 0.089 . cgd3_2190 261 TSKIVGK|IH 0.076 . cgd3_2190 268 IHVAQMK|IG 0.064 . cgd3_2190 296 FGLDLLK|RY 0.054 . cgd3_2190 297 GLDLLKR|YQ 0.149 . cgd3_2190 315 LIIGDEK|VQ 0.058 . cgd3_2190 345 QCFEQGK|KL 0.059 . cgd3_2190 346 CFEQGKK|LQ 0.066 . cgd3_2190 364 QVINALR|AT 0.087 . ____________________________^_________________

  • Fasta :-

    >cgd3_2190 ATGAAAGTGAATATTTTCTATAGCGTAACAGGAGAGCTCATCTCAGTTGAAATCCATGAA GAAACTACTGTTGAGGTTTTAAAATCGCTTATTGAAATTGAACTTAACTTAGATAGTTTT AAGAATTACGAGCTCTCAATTGAAGGTAAAATTTTGAAAAATGATGGATTCGTATTATCT GATATTGTAAATGAAGGCTCAATATTTGTATTATCAGAAAAAACCAATAAAAATACCTTT GAAAATTCTAATTTTTCTTTGAATGACCGTGAAAATCTGATTCAATTGCTTTCAAAAGAG CTTTTCACAAAAATTAAAGAAGATCAATCATTAAAATCAGTATACTACTCAAAATCAAGT AAATATAGAGATTCAATTGATAAAGATGATATTAAAAGTTTTACAGAACTAATAAAAAAT GACTACTTTTCCGGAAATCTGAACTCTATTTCTTCTAGTTCAAATTCAAGCTCAAATTTG TATAATTTGGACCCTTTAAGCCCAGAATATCAAAGGTTAATTGAAGAGCAAGTAAGAAAA CAAAATGTTGAAGAAAATTTAATTTTGGCGCAAGACCATTTACCAGAAAGTTTTACGCAA GTTCACATGCTATATATAAATGCAGAAGTTAATGGAATCTCAATTAAAGCGTTTGTTGAT AGTGGTGCGCAAACAACAATTATGTCTAAAAAATGTGCAGAAAAGTGCAACCTCGTGAGG TTAATAGACTATAGGTTTAGTGGAATTGCACAAGGTGTGGGCACAAGTAAAATTGTTGGT AAAATACACGTTGCTCAAATGAAAATTGGAAATTCCTTCTTTCCATTCTCAATAACAGTA CTTGAAGAAAGTCATGTGGATTTCCTATTTGGATTGGATTTACTTAAAAGGTATCAATGT TGTATTGACTTGCATCAAAATGCACTAATTATTGGAGATGAAAAGGTACAATTCTTATCT GAATCCGAAATAAATAGTGAAATTAGTCAAATAAATTCAAATAATGAATATGATCAATGC TTTGAACAGGGGAAAAAACTTCAACTTTTATCACTAGGGTTTTCTGAAAGCCAGGTAATT AATGCATTAAGAGCTACAAATGGAAATACTGAATTAGCTGCGTCATTATTATTTTCAAAT GAAACTTTTGAATAA
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  • Fasta :-

    MKVNIFYSVTGELISVEIHEETTVEVLKSLIEIELNLDSFKNYELSIEGKILKNDGFVLS DIVNEGSIFVLSEKTNKNTFENSNFSLNDRENLIQLLSKELFTKIKEDQSLKSVYYSKSS KYRDSIDKDDIKSFTELIKNDYFSGNLNSISSSSNSSSNLYNLDPLSPEYQRLIEEQVRK QNVEENLILAQDHLPESFTQVHMLYINAEVNGISIKAFVDSGAQTTIMSKKCAEKCNLVR LIDYRFSGIAQGVGTSKIVGKIHVAQMKIGNSFFPFSITVLEESHVDFLFGLDLLKRYQC CIDLHQNALIIGDEKVQFLSESEINSEISQINSNNEYDQCFEQGKKLQLLSLGFSESQVI NALRATNGNTELAASLLFSNETFE

  • title: catalytic motif
  • coordinates: D220,S221,G222
No Results
No Results
IDSitePeptideScoreMethod
cgd3_2190167 SLDPLSPEYQ0.992unsp

cgd3_2190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India