cgd3_2390 | Proliferation-associated protein 2G4 metalloprotease

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_IDPredictionOTHERSPmTPCS_Position
cgd3_2390OTHER0.9999700.0000260.000004
No Results

  • Fasta :-

    >cgd3_2390 MSKQEGLENVDDFCISESISNSEVVTKYYTAAEIVNSTLQYVITLCLDGADISEICRKSD SMIEEKSSSVYNKKEGGRKLDKGIAFPTCISVNEICGNFSPLPAESLKLKNGDLIKIDLG AHIDGFISICSHSIVIGTERISGKQADVLKAANTAMEVAIRTVKPGNTNTYVTSMLNKTV KEFNCNMVQGVLSHQLKRHVIDGNRVIISKETLDEKVDEFTFEENEVYGLDILVSSGEGV PRESDYRSTVFKRAIETNYNLKSPIPRQFLSEVNKRFPTLPFSLNMISDEKVARLGVSEC IRHNLLYSYPVITERQGEYVASFKCTLLLLPNGSKRISGLQFTQENICDSEFKVTDEEIN SILSTPLSVKKKKKNKPIVSS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_2390.fa Sequence name : cgd3_2390 Sequence length : 381 VALUES OF COMPUTED PARAMETERS Coef20 : 3.400 CoefTot : -0.156 ChDiff : -3 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 1.265 0.095 0.525 MesoH : -0.590 0.414 -0.320 0.232 MuHd_075 : 24.565 15.723 8.111 4.630 MuHd_095 : 19.410 13.388 7.106 2.794 MuHd_100 : 13.469 10.627 4.965 1.893 MuHd_105 : 13.177 9.986 3.907 1.911 Hmax_075 : 4.550 10.733 1.577 3.698 Hmax_095 : -2.187 6.800 -0.995 1.566 Hmax_100 : -4.500 5.500 -1.701 1.930 Hmax_105 : -4.900 6.883 -1.701 1.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9521 0.0479 DFMC : 0.9525 0.0475
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 381 cgd3_2390 MSKQEGLENVDDFCISESISNSEVVTKYYTAAEIVNSTLQYVITLCLDGADISEICRKSDSMIEEKSSSVYNKKEGGRKL 80 DKGIAFPTCISVNEICGNFSPLPAESLKLKNGDLIKIDLGAHIDGFISICSHSIVIGTERISGKQADVLKAANTAMEVAI 160 RTVKPGNTNTYVTSMLNKTVKEFNCNMVQGVLSHQLKRHVIDGNRVIISKETLDEKVDEFTFEENEVYGLDILVSSGEGV 240 PRESDYRSTVFKRAIETNYNLKSPIPRQFLSEVNKRFPTLPFSLNMISDEKVARLGVSECIRHNLLYSYPVITERQGEYV 320 ASFKCTLLLLPNGSKRISGLQFTQENICDSEFKVTDEEINSILSTPLSVKKKKKNKPIVSS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_2390 3 ----MSK|QE 0.063 . cgd3_2390 27 NSEVVTK|YY 0.085 . cgd3_2390 57 DISEICR|KS 0.089 . cgd3_2390 58 ISEICRK|SD 0.160 . cgd3_2390 66 DSMIEEK|SS 0.083 . cgd3_2390 73 SSSVYNK|KE 0.084 . cgd3_2390 74 SSVYNKK|EG 0.126 . cgd3_2390 78 NKKEGGR|KL 0.112 . cgd3_2390 79 KKEGGRK|LD 0.068 . cgd3_2390 82 GGRKLDK|GI 0.065 . cgd3_2390 108 LPAESLK|LK 0.064 . cgd3_2390 110 AESLKLK|NG 0.067 . cgd3_2390 116 KNGDLIK|ID 0.058 . cgd3_2390 140 IVIGTER|IS 0.106 . cgd3_2390 144 TERISGK|QA 0.086 . cgd3_2390 150 KQADVLK|AA 0.081 . cgd3_2390 161 AMEVAIR|TV 0.121 . cgd3_2390 164 VAIRTVK|PG 0.094 . cgd3_2390 178 VTSMLNK|TV 0.079 . cgd3_2390 181 MLNKTVK|EF 0.074 . cgd3_2390 197 VLSHQLK|RH 0.063 . cgd3_2390 198 LSHQLKR|HV 0.480 . cgd3_2390 205 HVIDGNR|VI 0.077 . cgd3_2390 210 NRVIISK|ET 0.066 . cgd3_2390 216 KETLDEK|VD 0.054 . cgd3_2390 242 SGEGVPR|ES 0.086 . cgd3_2390 247 PRESDYR|ST 0.121 . cgd3_2390 252 YRSTVFK|RA 0.086 . cgd3_2390 253 RSTVFKR|AI 0.351 . cgd3_2390 262 ETNYNLK|SP 0.072 . cgd3_2390 267 LKSPIPR|QF 0.106 . cgd3_2390 275 FLSEVNK|RF 0.066 . cgd3_2390 276 LSEVNKR|FP 0.138 . cgd3_2390 291 NMISDEK|VA 0.058 . cgd3_2390 294 SDEKVAR|LG 0.078 . cgd3_2390 302 GVSECIR|HN 0.073 . cgd3_2390 315 YPVITER|QG 0.084 . cgd3_2390 324 EYVASFK|CT 0.059 . cgd3_2390 335 LLPNGSK|RI 0.065 . cgd3_2390 336 LPNGSKR|IS 0.375 . cgd3_2390 353 ICDSEFK|VT 0.072 . cgd3_2390 370 STPLSVK|KK 0.057 . cgd3_2390 371 TPLSVKK|KK 0.089 . cgd3_2390 372 PLSVKKK|KK 0.140 . cgd3_2390 373 LSVKKKK|KN 0.141 . cgd3_2390 374 SVKKKKK|NK 0.118 . cgd3_2390 376 KKKKKNK|PI 0.077 . ____________________________^_________________

  • Fasta :-

    >cgd3_2390 ATGTCAAAACAAGAAGGGCTTGAGAACGTAGACGACTTTTGCATTTCTGAGTCAATATCC AATTCAGAGGTTGTTACTAAATACTATACAGCAGCGGAGATAGTAAATTCAACGCTTCAG TATGTAATAACATTATGTTTGGATGGCGCAGATATCTCAGAAATTTGCAGGAAAAGCGAC TCTATGATCGAGGAGAAGTCAAGTTCAGTTTATAACAAAAAAGAGGGTGGCAGGAAATTG GATAAGGGTATTGCATTTCCTACGTGCATTTCTGTAAATGAAATTTGTGGCAATTTTTCC CCTTTGCCTGCAGAAAGCCTAAAGTTAAAGAATGGTGACTTAATTAAGATTGACCTCGGC GCTCATATAGATGGATTCATTAGTATTTGCTCGCATTCCATTGTTATTGGGACTGAACGT ATTTCAGGAAAACAAGCGGATGTTTTAAAGGCAGCAAATACTGCGATGGAAGTGGCTATT CGAACTGTAAAACCTGGAAACACTAACACATATGTAACATCTATGCTTAACAAGACTGTT AAGGAATTTAACTGCAATATGGTTCAGGGAGTTTTGTCACATCAGCTAAAAAGACATGTT ATTGATGGAAATCGTGTAATCATTTCAAAAGAGACACTAGATGAAAAAGTTGATGAATTC ACATTCGAGGAAAATGAAGTTTATGGATTGGATATTCTAGTAAGCAGTGGAGAAGGCGTT CCCAGGGAGTCTGATTACAGAAGCACAGTTTTTAAACGCGCTATTGAAACTAACTATAAC TTGAAAAGCCCGATTCCAAGGCAATTTCTAAGTGAAGTTAACAAAAGATTCCCTACATTA CCGTTTTCGTTAAATATGATATCAGATGAAAAGGTTGCAAGATTGGGAGTTTCTGAATGC ATTAGACATAACCTTTTGTATTCATACCCTGTAATAACAGAGAGACAAGGTGAGTACGTT GCGAGCTTTAAATGTACACTTCTACTGCTTCCAAATGGTTCAAAACGCATTTCCGGCCTA CAATTCACACAGGAAAATATTTGTGACTCGGAATTCAAGGTAACTGATGAAGAAATTAAT TCAATTCTTTCAACTCCACTTTCAGTGAAGAAGAAGAAGAAAAACAAACCTATAGTTAGT TCTTAG
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  • Fasta :-

    MSKQEGLENVDDFCISESISNSEVVTKYYTAAEIVNSTLQYVITLCLDGADISEICRKSD SMIEEKSSSVYNKKEGGRKLDKGIAFPTCISVNEICGNFSPLPAESLKLKNGDLIKIDLG AHIDGFISICSHSIVIGTERISGKQADVLKAANTAMEVAIRTVKPGNTNTYVTSMLNKTV KEFNCNMVQGVLSHQLKRHVIDGNRVIISKETLDEKVDEFTFEENEVYGLDILVSSGEGV PRESDYRSTVFKRAIETNYNLKSPIPRQFLSEVNKRFPTLPFSLNMISDEKVARLGVSEC IRHNLLYSYPVITERQGEYVASFKCTLLLLPNGSKRISGLQFTQENICDSEFKVTDEEIN SILSTPLSVKKKKKNKPIVSS

  • title: active site
  • coordinates: N98,D118,I129,E238,Y307,K324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd3_2390244 SVPRESDYRS0.996unspcgd3_2390244 SVPRESDYRS0.996unspcgd3_2390244 SVPRESDYRS0.996unspcgd3_239061 SRKSDSMIEE0.994unspcgd3_2390142 STERISGKQA0.997unsp

cgd3_2390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India