cgd3_2680 | Signal peptidase complex subunit 3

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	cgd3_2680	SP	0.126084	0.870003	0.003913	CS pos: 25-26. AVG-NF. Pr: 0.2303

No Results

Fasta :-
>cgd3_2680 MDSLFSRINIIFCSFVISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQA NIALNINTNLSNSLNWNTNQIFTFIYVSYKNKHQNNYVTVWDDIFSKKKNKTSFSMKGVI NKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVSTEKKLPVNYFQYK
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_2680.fa Sequence name : cgd3_2680 Sequence length : 173 VALUES OF COMPUTED PARAMETERS Coef20 : 4.971 CoefTot : 0.448 ChDiff : 10 ZoneTo : 34 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.965 2.459 0.619 0.722 MesoH : -0.183 0.586 -0.223 0.292 MuHd_075 : 18.956 13.915 5.686 4.362 MuHd_095 : 20.119 22.262 7.127 6.351 MuHd_100 : 17.512 18.639 6.910 5.611 MuHd_105 : 16.318 11.298 5.092 4.342 Hmax_075 : 19.833 14.000 4.024 5.020 Hmax_095 : 19.400 23.275 5.430 7.560 Hmax_100 : 23.500 22.100 5.430 8.600 Hmax_105 : 19.900 14.600 5.706 6.659 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8916 0.1084 DFMC : 0.9591 0.0409

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 173 cgd3_2680 MDSLFSRINIIFCSFVISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQANIALNINTNLSNSLNWNTNQ 80 IFTFIYVSYKNKHQNNYVTVWDDIFSKKKNKTSFSMKGVINKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVS 160 TEKKLPVNYFQYK 240 ................................................................................ 80 ................................................................................ 160 ............. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_2680 7 MDSLFSR|IN 0.091 . cgd3_2680 34 ASSFIYK|EL 0.081 . cgd3_2680 56 GISPYLR|ND 0.083 . cgd3_2680 90 FIYVSYK|NK 0.069 . cgd3_2680 92 YVSYKNK|HQ 0.072 . cgd3_2680 107 WDDIFSK|KK 0.058 . cgd3_2680 108 DDIFSKK|KN 0.112 . cgd3_2680 109 DIFSKKK|NK 0.077 . cgd3_2680 111 FSKKKNK|TS 0.068 . cgd3_2680 117 KTSFSMK|GV 0.116 . cgd3_2680 122 MKGVINK|YP 0.066 . cgd3_2680 126 INKYPIR|DI 0.169 . cgd3_2680 130 PIRDIGR|NL 0.079 . cgd3_2680 133 DIGRNLR|SK 0.395 . cgd3_2680 135 GRNLRSK|SI 0.096 . cgd3_2680 153 PIVGSIK|YH 0.064 . cgd3_2680 158 IKYHHLK|VS 0.063 . cgd3_2680 163 LKVSTEK|KL 0.065 . cgd3_2680 164 KVSTEKK|LP 0.092 . cgd3_2680 173 VNYFQYK|-- 0.071 . ____________________________^_________________

Fasta :-
>cgd3_2680 ATAAACCTACGGCTTGAAAAGACATATTTTATCACAAATTTATTACTAATAATTCCGCGG CTCTGTAACAGTTTTCATATTTTCATAAAAATGGATTCACTCTTTTCAAGAATAAATATT ATCTTTTGCTCATTTGTAATTTCTTTGGCATGCTGTGCAGTTGGGAACTTTGCATCTTCA TTTATTTACAAAGAACTCCCAATAGGAGATACTGAATTACACTCCATACTTGACTTAGGA ATTAGCCCATACTTAAGGAATGATCAAGCAAATATTGCGCTCAACATTAATACAAACCTT TCTAATTCTCTGAACTGGAATACAAACCAAATCTTCACATTTATATATGTAAGCTATAAA AATAAACACCAAAATAATTACGTAACAGTTTGGGATGATATTTTTTCAAAAAAAAAAAAC AAAACAAGTTTTTCAATGAAAGGAGTGATAAATAAATATCCAATTAGGGATATCGGGAGA AACCTTAGAAGCAAAAGTATAAATCTTAATATCGCATTCTGCTACATGCCAATTGTGGGT AGCATTAAATATCACCATTTAAAAGTGTCGACTGAAAAAAAATTGCCAGTGAATTATTTT CAATATAAATGA
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Fasta :-

MDSLFSRINIIFCSFVISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQA NIALNINTNLSNSLNWNTNQIFTFIYVSYKNKHQNNYVTVWDDIFSKKKNKTSFSMKGVI NKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVSTEKKLPVNYFQYK