cgd3_2920 | Cysteine protease

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_IDPredictionOTHERSPmTPCS_Position
cgd3_2920OTHER0.9341510.0105040.055345
No Results

  • Fasta :-

    >cgd3_2920 MNFGRTIYFSISSFFREMTQKFLSAEEEIFMLKNKFAPEEKKYFLKEFHDIILFTYRNEF KNIIITRNTVQLTKNYSKNINSDVGWGCMYRVTQMSIAHGICQFMKRFLGNLNIEKILNN FQDNESAKFSIHNMVNIGLSEFGIDPTSWIGPTTSSMIANKLINDNRSIISNIQIASITY VEGTIYRDQAVKHFSEVGSDSCTFVWLCMKLGTSKFNINSYKKTVISMSNVSQFICIMGG NNYSSGALLIVAFSNSFLYCLDPHIKVLPSFSDKNFIRDDFIQKVPTRIYWGELNSSLSM VYICRNLEDFDDLCSNLTRINSDLFEVINNCDFEVKSINELDSGFLVV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_2920.fa Sequence name : cgd3_2920 Sequence length : 348 VALUES OF COMPUTED PARAMETERS Coef20 : 4.530 CoefTot : 0.065 ChDiff : -1 ZoneTo : 16 KR : 2 DE : 0 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.576 1.647 0.283 0.603 MesoH : 0.245 0.541 -0.171 0.285 MuHd_075 : 17.322 5.215 3.715 3.455 MuHd_095 : 38.485 24.515 9.769 9.576 MuHd_100 : 37.891 24.437 9.473 9.877 MuHd_105 : 27.295 18.827 6.788 7.945 Hmax_075 : 15.400 7.800 1.072 4.800 Hmax_095 : 21.700 18.900 3.519 7.520 Hmax_100 : 21.700 18.900 3.519 7.520 Hmax_105 : 18.113 14.612 2.487 6.317 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4238 0.5762 DFMC : 0.6410 0.3590
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 348 cgd3_2920 MNFGRTIYFSISSFFREMTQKFLSAEEEIFMLKNKFAPEEKKYFLKEFHDIILFTYRNEFKNIIITRNTVQLTKNYSKNI 80 NSDVGWGCMYRVTQMSIAHGICQFMKRFLGNLNIEKILNNFQDNESAKFSIHNMVNIGLSEFGIDPTSWIGPTTSSMIAN 160 KLINDNRSIISNIQIASITYVEGTIYRDQAVKHFSEVGSDSCTFVWLCMKLGTSKFNINSYKKTVISMSNVSQFICIMGG 240 NNYSSGALLIVAFSNSFLYCLDPHIKVLPSFSDKNFIRDDFIQKVPTRIYWGELNSSLSMVYICRNLEDFDDLCSNLTRI 320 NSDLFEVINNCDFEVKSINELDSGFLVV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_2920 5 --MNFGR|TI 0.112 . cgd3_2920 16 SISSFFR|EM 0.137 . cgd3_2920 21 FREMTQK|FL 0.104 . cgd3_2920 33 EEIFMLK|NK 0.057 . cgd3_2920 35 IFMLKNK|FA 0.081 . cgd3_2920 41 KFAPEEK|KY 0.064 . cgd3_2920 42 FAPEEKK|YF 0.116 . cgd3_2920 46 EKKYFLK|EF 0.074 . cgd3_2920 57 IILFTYR|NE 0.079 . cgd3_2920 61 TYRNEFK|NI 0.077 . cgd3_2920 67 KNIIITR|NT 0.096 . cgd3_2920 74 NTVQLTK|NY 0.065 . cgd3_2920 78 LTKNYSK|NI 0.064 . cgd3_2920 91 GWGCMYR|VT 0.092 . cgd3_2920 106 GICQFMK|RF 0.066 . cgd3_2920 107 ICQFMKR|FL 0.265 . cgd3_2920 116 GNLNIEK|IL 0.062 . cgd3_2920 128 QDNESAK|FS 0.091 . cgd3_2920 161 SSMIANK|LI 0.074 . cgd3_2920 167 KLINDNR|SI 0.135 . cgd3_2920 187 VEGTIYR|DQ 0.093 . cgd3_2920 192 YRDQAVK|HF 0.076 . cgd3_2920 210 FVWLCMK|LG 0.054 . cgd3_2920 215 MKLGTSK|FN 0.062 . cgd3_2920 222 FNINSYK|KT 0.070 . cgd3_2920 223 NINSYKK|TV 0.109 . cgd3_2920 266 CLDPHIK|VL 0.053 . cgd3_2920 274 LPSFSDK|NF 0.070 . cgd3_2920 278 SDKNFIR|DD 0.129 . cgd3_2920 284 RDDFIQK|VP 0.057 . cgd3_2920 288 IQKVPTR|IY 0.118 . cgd3_2920 305 SMVYICR|NL 0.094 . cgd3_2920 319 LCSNLTR|IN 0.120 . cgd3_2920 336 NCDFEVK|SI 0.079 . ____________________________^_________________

  • Fasta :-

    >cgd3_2920 ATGAATTTTGGAAGGACAATTTATTTTTCGATCAGTTCATTCTTCAGAGAAATGACACAA AAGTTTCTCAGCGCTGAAGAAGAAATTTTTATGCTAAAAAATAAATTTGCACCAGAAGAA AAAAAATACTTCTTAAAAGAATTTCACGATATTATACTATTCACATACAGGAATGAATTT AAAAATATTATCATAACTAGAAATACAGTACAACTAACAAAAAATTATTCAAAAAATATA AACTCTGATGTCGGGTGGGGATGCATGTATAGAGTGACCCAAATGTCGATTGCTCACGGT ATATGCCAATTTATGAAGAGGTTTCTGGGCAATTTAAATATCGAAAAAATTTTGAATAAC TTTCAAGATAATGAAAGTGCAAAATTTTCAATTCATAATATGGTAAATATTGGTCTGAGT GAATTCGGAATTGATCCTACATCTTGGATTGGACCAACAACATCATCAATGATCGCAAAT AAGCTAATAAATGATAATAGAAGCATTATATCTAATATTCAGATTGCGAGTATTACCTAC GTAGAAGGCACTATTTATAGGGATCAAGCGGTTAAACACTTTTCAGAAGTGGGTTCAGAT AGCTGTACTTTTGTATGGCTTTGCATGAAGTTGGGTACGTCCAAATTCAATATTAACTCA TATAAGAAAACAGTAATTTCAATGAGTAATGTCTCACAGTTCATATGTATTATGGGAGGT AATAATTATTCGTCAGGGGCTTTATTAATTGTTGCATTTAGCAATTCCTTTTTGTATTGC TTAGATCCGCATATTAAAGTACTTCCATCATTTTCCGATAAAAACTTTATTAGGGATGAC TTTATTCAAAAAGTTCCGACAAGGATTTATTGGGGGGAACTGAATTCATCTTTATCCATG GTTTATATTTGCCGAAACCTTGAAGATTTTGATGATTTGTGCAGCAATTTAACTAGAATT AATTCTGATTTATTTGAAGTTATAAATAATTGTGATTTTGAAGTAAAGAGTATAAATGAA TTAGATTCTGGTTTTTTAGTAGTATAA
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  • Fasta :-

    MNFGRTIYFSISSFFREMTQKFLSAEEEIFMLKNKFAPEEKKYFLKEFHDIILFTYRNEF KNIIITRNTVQLTKNYSKNINSDVGWGCMYRVTQMSIAHGICQFMKRFLGNLNIEKILNN FQDNESAKFSIHNMVNIGLSEFGIDPTSWIGPTTSSMIANKLINDNRSIISNIQIASITY VEGTIYRDQAVKHFSEVGSDSCTFVWLCMKLGTSKFNINSYKKTVISMSNVSQFICIMGG NNYSSGALLIVAFSNSFLYCLDPHIKVLPSFSDKNFIRDDFIQKVPTRIYWGELNSSLSM VYICRNLEDFDDLCSNLTRINSDLFEVINNCDFEVKSINELDSGFLVV

    No Results
No Results
No Results
IDSitePeptideScoreMethod
cgd3_292024 SQKFLSAEEE0.996unsp

cgd3_2920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India