cgd3_680 | Papain family cysteine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd3_680OTHER0.9922880.0051920.002520
No Results

  • Fasta :-

    >cgd3_680 MILSIINRFQCLILNKTSLEEYSNDEMMNICRNTWEEIEKLGQKPILDFEHCFGMIDMVY KSRRLMPTAEFDLTHYSLSKEEEVENYANMDIYSGELAEITAKDQNKIDSLILDKGNVKR NLASKIPESFDLRSNEANRKNGGSCITFPDNQGKCANCYNFSALSAIEGATCRQLGKRIP PLSQQHSLDCWLQSKGSVKACSGGQTFEVFNYAIKSKVCTRDSYPSTTHKTGKLGECKSN CNECVGIKNFKWSYTGSSILYEDPWDVITDAIYNYGPVTVSVCSLMPGFNLYSGGYYEPP TCGSIWCGTRQVDHAVTLIGYGVSESGKRYYIMKNSWGLSWGNKGFMNISADMCSTFFNP GWVTSVSMDGISDYCLNREPDKNEIAHDFVI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_680.fa Sequence name : cgd3_680 Sequence length : 391 VALUES OF COMPUTED PARAMETERS Coef20 : 4.574 CoefTot : 0.311 ChDiff : -7 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.006 0.167 0.465 MesoH : -0.052 0.163 -0.189 0.280 MuHd_075 : 11.925 5.670 2.188 2.352 MuHd_095 : 26.695 20.205 6.447 7.619 MuHd_100 : 19.300 17.815 4.393 6.553 MuHd_105 : 13.667 18.216 2.210 6.207 Hmax_075 : 16.700 17.800 3.377 5.840 Hmax_095 : 14.525 17.850 2.657 6.125 Hmax_100 : 12.900 20.700 2.262 6.400 Hmax_105 : 4.100 12.700 0.140 4.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4601 0.5399 DFMC : 0.5578 0.4422
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 391 cgd3_680 MILSIINRFQCLILNKTSLEEYSNDEMMNICRNTWEEIEKLGQKPILDFEHCFGMIDMVYKSRRLMPTAEFDLTHYSLSK 80 EEEVENYANMDIYSGELAEITAKDQNKIDSLILDKGNVKRNLASKIPESFDLRSNEANRKNGGSCITFPDNQGKCANCYN 160 FSALSAIEGATCRQLGKRIPPLSQQHSLDCWLQSKGSVKACSGGQTFEVFNYAIKSKVCTRDSYPSTTHKTGKLGECKSN 240 CNECVGIKNFKWSYTGSSILYEDPWDVITDAIYNYGPVTVSVCSLMPGFNLYSGGYYEPPTCGSIWCGTRQVDHAVTLIG 320 YGVSESGKRYYIMKNSWGLSWGNKGFMNISADMCSTFFNPGWVTSVSMDGISDYCLNREPDKNEIAHDFVI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_680 8 ILSIINR|FQ 0.110 . cgd3_680 16 QCLILNK|TS 0.053 . cgd3_680 32 EMMNICR|NT 0.088 . cgd3_680 40 TWEEIEK|LG 0.060 . cgd3_680 44 IEKLGQK|PI 0.068 . cgd3_680 61 MIDMVYK|SR 0.075 . cgd3_680 63 DMVYKSR|RL 0.079 . cgd3_680 64 MVYKSRR|LM 0.179 . cgd3_680 80 THYSLSK|EE 0.062 . cgd3_680 103 LAEITAK|DQ 0.070 . cgd3_680 107 TAKDQNK|ID 0.078 . cgd3_680 115 DSLILDK|GN 0.056 . cgd3_680 119 LDKGNVK|RN 0.055 . cgd3_680 120 DKGNVKR|NL 0.206 . cgd3_680 125 KRNLASK|IP 0.066 . cgd3_680 133 PESFDLR|SN 0.152 . cgd3_680 139 RSNEANR|KN 0.122 . cgd3_680 140 SNEANRK|NG 0.082 . cgd3_680 154 FPDNQGK|CA 0.076 . cgd3_680 173 IEGATCR|QL 0.111 . cgd3_680 177 TCRQLGK|RI 0.065 . cgd3_680 178 CRQLGKR|IP 0.151 . cgd3_680 195 DCWLQSK|GS 0.060 . cgd3_680 199 QSKGSVK|AC 0.090 . cgd3_680 215 VFNYAIK|SK 0.070 . cgd3_680 217 NYAIKSK|VC 0.058 . cgd3_680 221 KSKVCTR|DS 0.146 . cgd3_680 230 YPSTTHK|TG 0.069 . cgd3_680 233 TTHKTGK|LG 0.071 . cgd3_680 238 GKLGECK|SN 0.077 . cgd3_680 248 NECVGIK|NF 0.058 . cgd3_680 251 VGIKNFK|WS 0.065 . cgd3_680 310 SIWCGTR|QV 0.134 . cgd3_680 328 GVSESGK|RY 0.068 . cgd3_680 329 VSESGKR|YY 0.156 . cgd3_680 334 KRYYIMK|NS 0.067 . cgd3_680 344 GLSWGNK|GF 0.080 . cgd3_680 378 SDYCLNR|EP 0.100 . cgd3_680 382 LNREPDK|NE 0.066 . ____________________________^_________________

  • Fasta :-

    >cgd3_680 GTAATCCACAATTTTTGGTTTTTGCTCTTTTCCAAATCTTAATGATACTTTCAATAATTA ATAGATTCCAATGTCTTATTTTAAATAAGACAAGCTTAGAAGAGTATTCCAATGATGAGA TGATGAACATATGTAGGAATACTTGGGAAGAAATAGAGAAATTAGGCCAGAAACCAATAC TGGACTTTGAACACTGCTTTGGAATGATTGATATGGTATATAAGTCAAGAAGATTAATGC CAACTGCAGAATTTGACTTGACTCATTATTCCCTTTCAAAAGAAGAGGAGGTTGAGAATT ATGCAAACATGGATATTTATTCAGGGGAGCTGGCTGAAATTACAGCAAAAGATCAAAATA AGATTGATTCTTTAATATTGGATAAAGGTAATGTAAAAAGGAATTTGGCATCAAAGATTC CAGAAAGTTTTGATTTAAGAAGTAATGAAGCAAATAGGAAGAATGGAGGAAGTTGTATTA CTTTCCCAGATAACCAAGGAAAATGTGCAAATTGTTATAATTTCTCAGCATTATCTGCAA TAGAAGGAGCAACATGTAGACAACTAGGAAAACGGATTCCTCCACTTTCTCAACAACATT CTTTAGATTGTTGGCTTCAAAGTAAAGGGTCAGTAAAAGCTTGTAGTGGTGGACAGACTT TTGAGGTATTCAACTATGCAATTAAATCCAAAGTATGTACAAGAGATTCTTATCCATCAA CAACACATAAAACAGGTAAACTTGGAGAGTGTAAAAGTAATTGCAATGAGTGTGTAGGAA TAAAAAACTTTAAATGGAGTTATACAGGTTCAAGCATTTTATATGAAGATCCTTGGGATG TAATTACTGATGCGATATATAACTATGGGCCAGTAACAGTGAGTGTTTGTTCATTAATGC CTGGATTTAATTTATATTCAGGGGGGTATTATGAACCACCAACATGTGGAAGTATTTGGT GTGGAACAAGACAAGTTGATCATGCAGTGACTTTAATAGGATATGGAGTAAGTGAATCGG GGAAAAGGTATTATATAATGAAGAATAGTTGGGGTTTGAGTTGGGGTAATAAGGGTTTTA TGAATATAAGTGCTGATATGTGCAGTACATTCTTCAATCCAGGATGGGTAACTTCTGTAA GTATGGACGGTATTTCAGATTATTGTTTAAATAGAGAACCAGATAAGAATGAAATAGCAC ATGATTTCGTGATTTAA
  • Download Fasta

  • Fasta :-

    MILSIINRFQCLILNKTSLEEYSNDEMMNICRNTWEEIEKLGQKPILDFEHCFGMIDMVY KSRRLMPTAEFDLTHYSLSKEEEVENYANMDIYSGELAEITAKDQNKIDSLILDKGNVKR NLASKIPESFDLRSNEANRKNGGSCITFPDNQGKCANCYNFSALSAIEGATCRQLGKRIP PLSQQHSLDCWLQSKGSVKACSGGQTFEVFNYAIKSKVCTRDSYPSTTHKTGKLGECKSN CNECVGIKNFKWSYTGSSILYEDPWDVITDAIYNYGPVTVSVCSLMPGFNLYSGGYYEPP TCGSIWCGTRQVDHAVTLIGYGVSESGKRYYIMKNSWGLSWGNKGFMNISADMCSTFFNP GWVTSVSMDGISDYCLNREPDKNEIAHDFVI

  • title: active site
  • coordinates: Q152,C158,H314,N335
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd3_68018 SLNKTSLEEY0.992unspcgd3_68079 SHYSLSKEEE0.995unsp

cgd3_680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India