cgd4_1530 | Phospholipase/Carboxylesterase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd4_1530SP0.3625870.6324440.004969CS pos: 23-24. IKN-QL. Pr: 0.6162
No Results

  • Fasta :-

    >cgd4_1530 MPSEKKGMLFCLGCISVIPGIKNQLVNSMSFHPPIIKGYKYSKCGNSIVLFDFHRKRYVT LNEMKKNLINIDPGRCQIQVKFSSINSIDFFYYKNPAAKFTIIYSHSNATDIGYLFGHLL DFSHKACVNIISYEYNGYGQSKKKTSEESLYENIKTIVHYSINHLKLPSSSLILYGQSIG SAPTIHFASTYNSINIAGIIIHSGIKSAVSVICNNTNSKSLPWYDAFKNLEKIQKVKCPV FVIHGTADTVIPFNHGEMLYKLSPNKYTPWYVNGANHCNIELNWRDELISKVRQFILYLS PKPKIQSSKSSYMTHDHTLSISRISTLSSQGFENLYHELDDDDDNDDDDDNIYDNYQEYE STSHEYNTNNNKDSCYYREKSYPIPKNHTNNHLNYHNTTKSSNKYFNNQSSRMKIEENNI ISNSSISSKSKFTHSNTYHPNTSNNSHSHNYYSKTLNSAYQTPSSGNNCQISDQVVYGVS IYDDNINLHANMYSGNCRKPKNFTRIFGL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_1530.fa Sequence name : cgd4_1530 Sequence length : 509 VALUES OF COMPUTED PARAMETERS Coef20 : 3.512 CoefTot : -3.123 ChDiff : 9 ZoneTo : 51 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.688 0.234 0.609 MesoH : 0.140 0.429 -0.242 0.290 MuHd_075 : 35.603 31.489 12.564 8.932 MuHd_095 : 19.362 24.518 7.443 5.366 MuHd_100 : 20.446 23.795 7.962 5.271 MuHd_105 : 28.590 20.694 9.632 6.815 Hmax_075 : 19.000 22.167 4.565 7.420 Hmax_095 : 16.275 18.988 4.610 5.451 Hmax_100 : 8.500 20.600 7.325 5.360 Hmax_105 : 10.150 11.900 7.508 3.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2930 0.7070 DFMC : 0.7793 0.2207
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 509 cgd4_1530 MPSEKKGMLFCLGCISVIPGIKNQLVNSMSFHPPIIKGYKYSKCGNSIVLFDFHRKRYVTLNEMKKNLINIDPGRCQIQV 80 KFSSINSIDFFYYKNPAAKFTIIYSHSNATDIGYLFGHLLDFSHKACVNIISYEYNGYGQSKKKTSEESLYENIKTIVHY 160 SINHLKLPSSSLILYGQSIGSAPTIHFASTYNSINIAGIIIHSGIKSAVSVICNNTNSKSLPWYDAFKNLEKIQKVKCPV 240 FVIHGTADTVIPFNHGEMLYKLSPNKYTPWYVNGANHCNIELNWRDELISKVRQFILYLSPKPKIQSSKSSYMTHDHTLS 320 ISRISTLSSQGFENLYHELDDDDDNDDDDDNIYDNYQEYESTSHEYNTNNNKDSCYYREKSYPIPKNHTNNHLNYHNTTK 400 SSNKYFNNQSSRMKIEENNIISNSSISSKSKFTHSNTYHPNTSNNSHSHNYYSKTLNSAYQTPSSGNNCQISDQVVYGVS 480 IYDDNINLHANMYSGNCRKPKNFTRIFGL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd4_1530 5 --MPSEK|KG 0.053 . cgd4_1530 6 -MPSEKK|GM 0.079 . cgd4_1530 22 SVIPGIK|NQ 0.053 . cgd4_1530 37 FHPPIIK|GY 0.057 . cgd4_1530 40 PIIKGYK|YS 0.065 . cgd4_1530 43 KGYKYSK|CG 0.060 . cgd4_1530 55 VLFDFHR|KR 0.079 . cgd4_1530 56 LFDFHRK|RY 0.071 . cgd4_1530 57 FDFHRKR|YV 0.324 . cgd4_1530 65 VTLNEMK|KN 0.056 . cgd4_1530 66 TLNEMKK|NL 0.114 . cgd4_1530 75 INIDPGR|CQ 0.104 . cgd4_1530 81 RCQIQVK|FS 0.077 . cgd4_1530 94 IDFFYYK|NP 0.062 . cgd4_1530 99 YKNPAAK|FT 0.085 . cgd4_1530 125 LLDFSHK|AC 0.063 . cgd4_1530 142 NGYGQSK|KK 0.068 . cgd4_1530 143 GYGQSKK|KT 0.121 . cgd4_1530 144 YGQSKKK|TS 0.123 . cgd4_1530 155 SLYENIK|TI 0.060 . cgd4_1530 166 YSINHLK|LP 0.066 . cgd4_1530 206 IIHSGIK|SA 0.078 . cgd4_1530 219 CNNTNSK|SL 0.076 . cgd4_1530 228 PWYDAFK|NL 0.073 . cgd4_1530 232 AFKNLEK|IQ 0.058 . cgd4_1530 235 NLEKIQK|VK 0.064 . cgd4_1530 237 EKIQKVK|CP 0.067 . cgd4_1530 261 HGEMLYK|LS 0.061 . cgd4_1530 266 YKLSPNK|YT 0.066 . cgd4_1530 285 NIELNWR|DE 0.074 . cgd4_1530 291 RDELISK|VR 0.055 . cgd4_1530 293 ELISKVR|QF 0.082 . cgd4_1530 302 ILYLSPK|PK 0.069 . cgd4_1530 304 YLSPKPK|IQ 0.082 . cgd4_1530 309 PKIQSSK|SS 0.092 . cgd4_1530 323 HTLSISR|IS 0.068 . cgd4_1530 372 YNTNNNK|DS 0.064 . cgd4_1530 378 KDSCYYR|EK 0.107 . cgd4_1530 380 SCYYREK|SY 0.075 . cgd4_1530 386 KSYPIPK|NH 0.058 . cgd4_1530 400 NYHNTTK|SS 0.095 . cgd4_1530 404 TTKSSNK|YF 0.069 . cgd4_1530 412 FNNQSSR|MK 0.109 . cgd4_1530 414 NQSSRMK|IE 0.070 . cgd4_1530 429 NSSISSK|SK 0.110 . cgd4_1530 431 SISSKSK|FT 0.096 . cgd4_1530 454 SHNYYSK|TL 0.075 . cgd4_1530 498 MYSGNCR|KP 0.084 . cgd4_1530 499 YSGNCRK|PK 0.072 . cgd4_1530 501 GNCRKPK|NF 0.204 . cgd4_1530 505 KPKNFTR|IF 0.123 . ____________________________^_________________

  • Fasta :-

    >cgd4_1530 ATGCCATCAGAAAAGAAAGGAATGTTATTTTGTTTGGGATGTATTTCTGTAATACCTGGT ATAAAAAATCAATTAGTTAATAGTATGTCATTTCATCCACCAATTATTAAAGGTTATAAA TATTCGAAATGTGGTAATTCTATTGTATTATTTGATTTTCATAGAAAAAGATATGTTACT TTAAATGAAATGAAAAAGAATCTAATTAATATTGATCCAGGAAGATGTCAAATTCAAGTA AAATTTTCTTCTATTAATTCTATTGATTTCTTTTATTATAAAAATCCTGCTGCAAAATTT ACTATAATATATTCTCATTCAAATGCCACAGATATTGGTTATTTATTTGGTCATTTATTA GATTTTTCTCACAAAGCTTGTGTTAATATTATTAGTTATGAATACAATGGATATGGACAA TCCAAGAAAAAAACTTCTGAAGAATCTTTATATGAAAATATTAAAACTATTGTTCATTAT TCTATTAATCATTTAAAGTTACCTTCTTCTAGCTTAATTTTATATGGTCAATCAATTGGA TCAGCACCAACTATACATTTTGCTTCAACTTATAATTCTATTAATATCGCAGGAATTATT ATTCATTCTGGTATTAAAAGTGCAGTCTCTGTTATATGTAATAATACTAATAGTAAATCA TTACCATGGTATGATGCATTTAAGAACTTAGAAAAAATACAAAAAGTTAAATGTCCAGTA TTTGTTATTCATGGTACTGCTGATACTGTTATTCCATTTAACCATGGTGAAATGCTTTAT AAGCTTTCTCCTAATAAATACACTCCATGGTATGTAAATGGTGCTAACCATTGTAATATT GAACTTAATTGGAGAGATGAACTTATTTCAAAAGTTAGACAATTTATTCTTTATTTATCT CCAAAGCCTAAAATTCAATCATCTAAATCTTCTTATATGACTCATGATCACACTTTATCA ATATCTAGAATATCTACATTGTCTAGTCAAGGATTTGAAAACTTATATCATGAATTAGAT GATGATGACGATAATGATGATGATGATGATAATATTTACGATAATTATCAAGAATATGAA TCTACAAGTCATGAGTATAATACTAATAACAATAAAGATAGTTGTTATTATAGAGAAAAA TCATATCCTATCCCAAAAAACCATACAAATAATCATTTAAATTATCACAATACAACAAAA TCATCCAATAAGTACTTTAATAATCAATCTTCTAGAATGAAAATAGAAGAAAATAATATT ATTTCTAATTCTTCAATTTCTTCCAAGTCAAAATTTACTCATTCGAATACATACCATCCA AATACTTCAAACAATTCTCATTCACATAATTACTATTCTAAAACACTAAATAGTGCTTAT CAAACTCCTTCTTCTGGAAATAATTGTCAAATATCTGATCAAGTTGTCTATGGTGTATCT ATATATGATGATAATATTAATTTACATGCAAATATGTATTCTGGTAATTGTCGAAAACCT AAAAATTTTACTCGTATTTTTGGTCTTTAA
  • Download Fasta

  • Fasta :-

    MPSEKKGMLFCLGCISVIPGIKNQLVNSMSFHPPIIKGYKYSKCGNSIVLFDFHRKRYVT LNEMKKNLINIDPGRCQIQVKFSSINSIDFFYYKNPAAKFTIIYSHSNATDIGYLFGHLL DFSHKACVNIISYEYNGYGQSKKKTSEESLYENIKTIVHYSINHLKLPSSSLILYGQSIG SAPTIHFASTYNSINIAGIIIHSGIKSAVSVICNNTNSKSLPWYDAFKNLEKIQKVKCPV FVIHGTADTVIPFNHGEMLYKLSPNKYTPWYVNGANHCNIELNWRDELISKVRQFILYLS PKPKIQSSKSSYMTHDHTLSISRISTLSSQGFENLYHELDDDDDNDDDDDNIYDNYQEYE STSHEYNTNNNKDSCYYREKSYPIPKNHTNNHLNYHNTTKSSNKYFNNQSSRMKIEENNI ISNSSISSKSKFTHSNTYHPNTSNNSHSHNYYSKTLNSAYQTPSSGNNCQISDQVVYGVS IYDDNINLHANMYSGNCRKPKNFTRIFGL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd4_1530151 YEESLYENIK0.991unspcgd4_1530151 YEESLYENIK0.991unspcgd4_1530151 YEESLYENIK0.991unspcgd4_1530310 SQSSKSSYMT0.994unspcgd4_1530427 SNSSISSKSK0.993unspcgd4_1530146 SKKKTSEESL0.996unspcgd4_1530149 STSEESLYEN0.993unsp

cgd4_1530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India