cgd4_2110 | Papain family cysteine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd4_2110SP0.0044450.9955230.000031CS pos: 21-22. VKC-DL. Pr: 0.9546
No Results

  • Fasta :-

    >cgd4_2110 MFKSLGKTILLAFFYIVFVKCDLPIHVTTADIIGRWEFQYSEPANNWIDGCGSGVPNKNT QNLQPSLADYNKWLTTKTNGKLEKLDLILTDLLFSENDYSDLDRSMFPGRSDWTFLAVKD PENGKVVGRWTMVYDEGFEIVVNNMTIFGIMKYNLLNNGNCSAKDGDNETTKGETLCYET DSSQIQIGWYYLRDSKKRGCVSGRKDESYENSLDIIKNRVEIPIKKSFESSIRSLSNSLQ EFAHRHNRKDSKNWRARSNFSLTDVAFSHHSYYMNAVNFRKIHPFRIMGSQHSSFIEMFK DGVGSVDNYDNIVDSIFACNVVRRKTDEVKLPSSFSIGDPFTDEKYSDFPFNQGNCGSCY AVSSVYILAKRAELKLNKLTNGASREEKILLSPQSVLSCSPFNQGCEGGYPFLVGRQAEE IGISSEKCMGYYADSNQECNFSPFITPEIEDRIYCEEGERMYAEEYGYVGGCYGCCDEDR MKEEIFKNGPIAVAMHIDTSLLVYDNGVYDSIPNDHTKYCDLPNKQLNGWEYTNHAIAIV GWGEENGIPYWIIRNSWGANWGKKGYAKIRRGKNIGGIENQAVFIDPDFTRGMGLSLLNK YQNSTAYRTNLPDIKDSPQGSEKVNVEIVNGGVDQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_2110.fa Sequence name : cgd4_2110 Sequence length : 635 VALUES OF COMPUTED PARAMETERS Coef20 : 4.481 CoefTot : -0.127 ChDiff : -14 ZoneTo : 21 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.100 2.100 0.202 0.717 MesoH : -0.737 0.004 -0.399 0.184 MuHd_075 : 18.145 10.975 5.705 4.175 MuHd_095 : 27.739 21.942 8.340 7.041 MuHd_100 : 21.064 16.447 7.299 5.394 MuHd_105 : 21.800 13.248 7.421 4.908 Hmax_075 : 20.200 21.100 3.673 7.020 Hmax_095 : 21.262 23.013 3.975 7.770 Hmax_100 : 21.400 24.400 4.407 8.020 Hmax_105 : 17.900 17.150 4.332 6.151 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7493 0.2507 DFMC : 0.9225 0.0775
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 635 cgd4_2110 MFKSLGKTILLAFFYIVFVKCDLPIHVTTADIIGRWEFQYSEPANNWIDGCGSGVPNKNTQNLQPSLADYNKWLTTKTNG 80 KLEKLDLILTDLLFSENDYSDLDRSMFPGRSDWTFLAVKDPENGKVVGRWTMVYDEGFEIVVNNMTIFGIMKYNLLNNGN 160 CSAKDGDNETTKGETLCYETDSSQIQIGWYYLRDSKKRGCVSGRKDESYENSLDIIKNRVEIPIKKSFESSIRSLSNSLQ 240 EFAHRHNRKDSKNWRARSNFSLTDVAFSHHSYYMNAVNFRKIHPFRIMGSQHSSFIEMFKDGVGSVDNYDNIVDSIFACN 320 VVRRKTDEVKLPSSFSIGDPFTDEKYSDFPFNQGNCGSCYAVSSVYILAKRAELKLNKLTNGASREEKILLSPQSVLSCS 400 PFNQGCEGGYPFLVGRQAEEIGISSEKCMGYYADSNQECNFSPFITPEIEDRIYCEEGERMYAEEYGYVGGCYGCCDEDR 480 MKEEIFKNGPIAVAMHIDTSLLVYDNGVYDSIPNDHTKYCDLPNKQLNGWEYTNHAIAIVGWGEENGIPYWIIRNSWGAN 560 WGKKGYAKIRRGKNIGGIENQAVFIDPDFTRGMGLSLLNKYQNSTAYRTNLPDIKDSPQGSEKVNVEIVNGGVDQ 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd4_2110 3 ----MFK|SL 0.101 . cgd4_2110 7 MFKSLGK|TI 0.060 . cgd4_2110 20 FYIVFVK|CD 0.061 . cgd4_2110 35 TADIIGR|WE 0.083 . cgd4_2110 58 GSGVPNK|NT 0.072 . cgd4_2110 72 SLADYNK|WL 0.075 . cgd4_2110 77 NKWLTTK|TN 0.073 . cgd4_2110 81 TTKTNGK|LE 0.055 . cgd4_2110 84 TNGKLEK|LD 0.062 . cgd4_2110 104 DYSDLDR|SM 0.167 . cgd4_2110 110 RSMFPGR|SD 0.170 . cgd4_2110 119 WTFLAVK|DP 0.063 . cgd4_2110 125 KDPENGK|VV 0.072 . cgd4_2110 129 NGKVVGR|WT 0.116 . cgd4_2110 152 TIFGIMK|YN 0.060 . cgd4_2110 164 NGNCSAK|DG 0.087 . cgd4_2110 172 GDNETTK|GE 0.066 . cgd4_2110 193 IGWYYLR|DS 0.097 . cgd4_2110 196 YYLRDSK|KR 0.080 . cgd4_2110 197 YLRDSKK|RG 0.099 . cgd4_2110 198 LRDSKKR|GC 0.275 . cgd4_2110 204 RGCVSGR|KD 0.124 . cgd4_2110 205 GCVSGRK|DE 0.074 . cgd4_2110 217 NSLDIIK|NR 0.051 . cgd4_2110 219 LDIIKNR|VE 0.101 . cgd4_2110 225 RVEIPIK|KS 0.057 . cgd4_2110 226 VEIPIKK|SF 0.155 . cgd4_2110 233 SFESSIR|SL 0.170 . cgd4_2110 245 LQEFAHR|HN 0.082 . cgd4_2110 248 FAHRHNR|KD 0.348 . cgd4_2110 249 AHRHNRK|DS 0.118 . cgd4_2110 252 HNRKDSK|NW 0.070 . cgd4_2110 255 KDSKNWR|AR 0.101 . cgd4_2110 257 SKNWRAR|SN 0.204 . cgd4_2110 280 MNAVNFR|KI 0.151 . cgd4_2110 281 NAVNFRK|IH 0.071 . cgd4_2110 286 RKIHPFR|IM 0.142 . cgd4_2110 300 SFIEMFK|DG 0.067 . cgd4_2110 323 FACNVVR|RK 0.083 . cgd4_2110 324 ACNVVRR|KT 0.209 . cgd4_2110 325 CNVVRRK|TD 0.096 . cgd4_2110 330 RKTDEVK|LP 0.058 . cgd4_2110 345 DPFTDEK|YS 0.064 . cgd4_2110 370 SVYILAK|RA 0.077 . cgd4_2110 371 VYILAKR|AE 0.097 . cgd4_2110 375 AKRAELK|LN 0.060 . cgd4_2110 378 AELKLNK|LT 0.059 . cgd4_2110 385 LTNGASR|EE 0.080 . cgd4_2110 388 GASREEK|IL 0.135 . cgd4_2110 416 YPFLVGR|QA 0.146 . cgd4_2110 427 IGISSEK|CM 0.066 . cgd4_2110 452 TPEIEDR|IY 0.104 . cgd4_2110 460 YCEEGER|MY 0.070 . cgd4_2110 480 GCCDEDR|MK 0.115 . cgd4_2110 482 CDEDRMK|EE 0.055 . cgd4_2110 487 MKEEIFK|NG 0.064 . cgd4_2110 518 IPNDHTK|YC 0.083 . cgd4_2110 525 YCDLPNK|QL 0.067 . cgd4_2110 554 IPYWIIR|NS 0.103 . cgd4_2110 563 WGANWGK|KG 0.067 . cgd4_2110 564 GANWGKK|GY 0.168 . cgd4_2110 568 GKKGYAK|IR 0.067 . cgd4_2110 570 KGYAKIR|RG 0.098 . cgd4_2110 571 GYAKIRR|GK 0.207 . cgd4_2110 573 AKIRRGK|NI 0.295 . cgd4_2110 591 IDPDFTR|GM 0.110 . cgd4_2110 600 GLSLLNK|YQ 0.060 . cgd4_2110 608 QNSTAYR|TN 0.105 . cgd4_2110 615 TNLPDIK|DS 0.068 . cgd4_2110 623 SPQGSEK|VN 0.068 . ____________________________^_________________

  • Fasta :-

    >cgd4_2110 ATGTTTAAGTCGTTGGGAAAGACCATACTACTTGCCTTTTTTTACATTGTATTTGTGAAA TGCGACTTGCCAATACATGTTACAACCGCAGATATTATAGGAAGATGGGAATTTCAATAT TCTGAACCTGCTAATAATTGGATTGATGGTTGTGGTTCAGGGGTTCCAAACAAAAACACT CAAAATTTACAACCAAGCTTGGCTGATTATAACAAATGGCTCACTACAAAAACAAACGGC AAATTAGAGAAACTGGATCTGATACTAACTGATCTTTTATTTTCAGAAAACGATTATAGT GATTTAGATAGATCAATGTTTCCAGGAAGGAGCGATTGGACATTTTTGGCAGTTAAAGAC CCCGAAAATGGAAAAGTTGTCGGGAGATGGACTATGGTTTATGATGAAGGATTTGAAATA GTCGTAAATAATATGACAATTTTTGGAATAATGAAATATAACTTATTAAATAATGGAAAT TGTAGTGCAAAGGATGGAGATAATGAGACGACAAAGGGTGAAACTTTGTGTTATGAAACT GACTCGTCCCAAATTCAAATTGGTTGGTATTATCTCAGAGATTCTAAAAAAAGAGGTTGT GTCAGTGGCAGAAAAGATGAAAGTTACGAGAATTCACTTGATATTATTAAAAATAGGGTG GAGATCCCAATCAAGAAATCTTTCGAGTCTAGTATAAGAAGTTTATCTAATTCATTGCAG GAGTTTGCGCATAGGCATAATCGTAAAGATTCAAAAAACTGGAGGGCAAGAAGCAATTTT AGTTTAACAGATGTTGCTTTCTCGCATCATTCATATTATATGAATGCTGTAAATTTTAGA AAAATACATCCGTTTAGAATTATGGGTTCGCAGCACTCGTCTTTCATCGAGATGTTTAAG GACGGAGTGGGGAGTGTTGATAATTATGACAACATTGTCGATTCAATTTTTGCATGCAAC GTAGTCAGGAGGAAAACTGATGAAGTAAAATTGCCCTCCTCGTTTTCCATTGGTGATCCA TTTACAGACGAGAAATATAGTGATTTTCCATTTAATCAAGGTAATTGTGGTTCATGTTAT GCTGTATCTTCTGTTTATATTTTAGCAAAAAGAGCAGAGTTGAAATTAAACAAATTGACA AATGGAGCTTCGAGAGAAGAAAAAATTTTGCTTTCACCACAATCAGTTCTTTCATGTTCT CCTTTTAATCAAGGATGCGAGGGTGGCTATCCATTTTTGGTCGGCAGACAAGCTGAAGAA ATAGGAATATCGTCGGAAAAGTGTATGGGATACTATGCGGATTCAAATCAGGAATGTAAT TTTTCGCCATTTATAACACCTGAAATTGAAGACCGAATTTACTGTGAAGAAGGTGAAAGA ATGTATGCGGAAGAATATGGCTATGTAGGCGGTTGCTATGGTTGCTGCGATGAAGATAGG ATGAAAGAAGAAATATTTAAGAATGGTCCGATAGCAGTTGCAATGCATATAGATACATCC TTATTGGTATACGATAATGGGGTATATGACTCAATACCTAATGATCATACCAAATATTGC GACTTACCAAATAAGCAATTAAATGGATGGGAATACACCAATCACGCTATTGCTATTGTA GGCTGGGGTGAAGAAAATGGTATTCCATATTGGATTATTCGAAACTCGTGGGGAGCTAAT TGGGGAAAGAAGGGTTACGCGAAAATTAGAAGAGGAAAAAATATCGGCGGAATTGAAAAT CAAGCAGTATTTATTGATCCCGACTTTACCAGGGGAATGGGCCTCTCTCTTCTGAATAAA TACCAAAATAGTACAGCTTACAGAACGAATTTGCCAGATATCAAGGACAGCCCTCAAGGA TCAGAGAAGGTTAATGTCGAAATTGTAAATGGCGGAGTTGATCAATAA
  • Download Fasta

  • Fasta :-

    MFKSLGKTILLAFFYIVFVKCDLPIHVTTADIIGRWEFQYSEPANNWIDGCGSGVPNKNT QNLQPSLADYNKWLTTKTNGKLEKLDLILTDLLFSENDYSDLDRSMFPGRSDWTFLAVKD PENGKVVGRWTMVYDEGFEIVVNNMTIFGIMKYNLLNNGNCSAKDGDNETTKGETLCYET DSSQIQIGWYYLRDSKKRGCVSGRKDESYENSLDIIKNRVEIPIKKSFESSIRSLSNSLQ EFAHRHNRKDSKNWRARSNFSLTDVAFSHHSYYMNAVNFRKIHPFRIMGSQHSSFIEMFK DGVGSVDNYDNIVDSIFACNVVRRKTDEVKLPSSFSIGDPFTDEKYSDFPFNQGNCGSCY AVSSVYILAKRAELKLNKLTNGASREEKILLSPQSVLSCSPFNQGCEGGYPFLVGRQAEE IGISSEKCMGYYADSNQECNFSPFITPEIEDRIYCEEGERMYAEEYGYVGGCYGCCDEDR MKEEIFKNGPIAVAMHIDTSLLVYDNGVYDSIPNDHTKYCDLPNKQLNGWEYTNHAIAIV GWGEENGIPYWIIRNSWGANWGKKGYAKIRRGKNIGGIENQAVFIDPDFTRGMGLSLLNK YQNSTAYRTNLPDIKDSPQGSEKVNVEIVNGGVDQ

  • title: active site
  • coordinates: Q353,C359,H535,N555
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd4_2110195 SYLRDSKKRG0.998unspcgd4_2110195 SYLRDSKKRG0.998unspcgd4_2110195 SYLRDSKKRG0.998unspcgd4_2110208 SRKDESYENS0.996unspcgd4_211099 YSENDYSDLD0.991unspcgd4_2110162 SNGNCSAKDG0.995unsp

cgd4_2110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India