cgd4_2190 | Aspartic peptidase A1 family

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_IDPredictionOTHERSPmTPCS_Position
cgd4_2190SP0.0034770.9965050.000018CS pos: 17-18. IKG-KT. Pr: 0.7361
No Results

  • Fasta :-

    >cgd4_2190 MNLLIFLITTLFVIIKGKTITLPLYGNVHKYGYYFIKVNVGFPITQQQTLIIDTGSSLTG FACSDCINCGTHENKPFNINLSDTSNIIKCKRNNTPNNETDIINKSIHGRISMNYPNYNK SFLNNKCVYDIKYSEGSRILGYFFEDFVEFENKLSSNLEIRQKFKNKFVFGCNIIENNFF KFQKASGIMGLANFSNKEMNQIINYIFKSGEVRKTDSDKIISIFFEKDGGKLTFGSTCFD QTKMMNYPFENYNITRCINDERYCAYISKIEVDSNTRELDTKLNERLFKAIFDTGTTISI FPARLFKKITRGLFNNVSKYYPKISGHDEKDGLTCWRMLNGISTDKFPNIKVVFNNNRNK LTEQLVINWPPESYLYLNKILEGNIKVYCLGIASNNLINSEIGADKNGENSSSNEIILGA TFFIYKEITFILNENKIMIRYNYLNSKDRNGILPKTTNNFRHKLNNSNSDIGATNYYEGK LTNAHVRDIHKNVLSKILVKRYVVLKNKKYEIWGILISSSLIIAILFSFLTIFHKFFRKF NFSVKSNYGI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_2190.fa Sequence name : cgd4_2190 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 4.617 CoefTot : -2.838 ChDiff : 24 ZoneTo : 52 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.365 2.441 0.480 0.834 MesoH : 0.195 0.614 -0.169 0.346 MuHd_075 : 20.331 16.902 6.509 4.466 MuHd_095 : 26.828 21.715 8.554 6.436 MuHd_100 : 28.244 19.243 8.607 5.930 MuHd_105 : 29.910 20.586 8.874 6.656 Hmax_075 : 17.700 18.400 3.547 6.100 Hmax_095 : 14.700 15.225 2.979 6.029 Hmax_100 : 13.700 12.900 2.433 5.490 Hmax_105 : 9.500 10.400 0.327 5.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6307 0.3693 DFMC : 0.6834 0.3166
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 cgd4_2190 MNLLIFLITTLFVIIKGKTITLPLYGNVHKYGYYFIKVNVGFPITQQQTLIIDTGSSLTGFACSDCINCGTHENKPFNIN 80 LSDTSNIIKCKRNNTPNNETDIINKSIHGRISMNYPNYNKSFLNNKCVYDIKYSEGSRILGYFFEDFVEFENKLSSNLEI 160 RQKFKNKFVFGCNIIENNFFKFQKASGIMGLANFSNKEMNQIINYIFKSGEVRKTDSDKIISIFFEKDGGKLTFGSTCFD 240 QTKMMNYPFENYNITRCINDERYCAYISKIEVDSNTRELDTKLNERLFKAIFDTGTTISIFPARLFKKITRGLFNNVSKY 320 YPKISGHDEKDGLTCWRMLNGISTDKFPNIKVVFNNNRNKLTEQLVINWPPESYLYLNKILEGNIKVYCLGIASNNLINS 400 EIGADKNGENSSSNEIILGATFFIYKEITFILNENKIMIRYNYLNSKDRNGILPKTTNNFRHKLNNSNSDIGATNYYEGK 480 LTNAHVRDIHKNVLSKILVKRYVVLKNKKYEIWGILISSSLIIAILFSFLTIFHKFFRKFNFSVKSNYGI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd4_2190 16 TLFVIIK|GK 0.071 . cgd4_2190 18 FVIIKGK|TI 0.062 . cgd4_2190 30 LYGNVHK|YG 0.064 . cgd4_2190 37 YGYYFIK|VN 0.063 . cgd4_2190 75 CGTHENK|PF 0.066 . cgd4_2190 89 DTSNIIK|CK 0.065 . cgd4_2190 91 SNIIKCK|RN 0.066 . cgd4_2190 92 NIIKCKR|NN 0.167 . cgd4_2190 105 ETDIINK|SI 0.081 . cgd4_2190 110 NKSIHGR|IS 0.138 . cgd4_2190 120 NYPNYNK|SF 0.058 . cgd4_2190 126 KSFLNNK|CV 0.079 . cgd4_2190 132 KCVYDIK|YS 0.069 . cgd4_2190 138 KYSEGSR|IL 0.102 . cgd4_2190 153 FVEFENK|LS 0.061 . cgd4_2190 161 SSNLEIR|QK 0.111 . cgd4_2190 163 NLEIRQK|FK 0.068 . cgd4_2190 165 EIRQKFK|NK 0.069 . cgd4_2190 167 RQKFKNK|FV 0.110 . cgd4_2190 181 IENNFFK|FQ 0.088 . cgd4_2190 184 NFFKFQK|AS 0.076 . cgd4_2190 197 LANFSNK|EM 0.079 . cgd4_2190 208 IINYIFK|SG 0.085 . cgd4_2190 213 FKSGEVR|KT 0.094 . cgd4_2190 214 KSGEVRK|TD 0.119 . cgd4_2190 219 RKTDSDK|II 0.075 . cgd4_2190 227 ISIFFEK|DG 0.083 . cgd4_2190 231 FEKDGGK|LT 0.059 . cgd4_2190 243 TCFDQTK|MM 0.064 . cgd4_2190 256 ENYNITR|CI 0.118 . cgd4_2190 262 RCINDER|YC 0.085 . cgd4_2190 269 YCAYISK|IE 0.061 . cgd4_2190 277 EVDSNTR|EL 0.078 . cgd4_2190 282 TRELDTK|LN 0.072 . cgd4_2190 286 DTKLNER|LF 0.085 . cgd4_2190 289 LNERLFK|AI 0.232 . cgd4_2190 304 ISIFPAR|LF 0.125 . cgd4_2190 307 FPARLFK|KI 0.188 . cgd4_2190 308 PARLFKK|IT 0.124 . cgd4_2190 311 LFKKITR|GL 0.094 . cgd4_2190 319 LFNNVSK|YY 0.074 . cgd4_2190 323 VSKYYPK|IS 0.079 . cgd4_2190 330 ISGHDEK|DG 0.081 . cgd4_2190 337 DGLTCWR|ML 0.086 . cgd4_2190 346 NGISTDK|FP 0.059 . cgd4_2190 351 DKFPNIK|VV 0.067 . cgd4_2190 358 VVFNNNR|NK 0.075 . cgd4_2190 360 FNNNRNK|LT 0.075 . cgd4_2190 379 SYLYLNK|IL 0.064 . cgd4_2190 386 ILEGNIK|VY 0.062 . cgd4_2190 406 SEIGADK|NG 0.060 . cgd4_2190 426 ATFFIYK|EI 0.065 . cgd4_2190 436 FILNENK|IM 0.054 . cgd4_2190 440 ENKIMIR|YN 0.076 . cgd4_2190 447 YNYLNSK|DR 0.073 . cgd4_2190 449 YLNSKDR|NG 0.077 . cgd4_2190 455 RNGILPK|TT 0.067 . cgd4_2190 461 KTTNNFR|HK 0.069 . cgd4_2190 463 TNNFRHK|LN 0.070 . cgd4_2190 480 TNYYEGK|LT 0.074 . cgd4_2190 487 LTNAHVR|DI 0.185 . cgd4_2190 491 HVRDIHK|NV 0.068 . cgd4_2190 496 HKNVLSK|IL 0.065 . cgd4_2190 500 LSKILVK|RY 0.055 . cgd4_2190 501 SKILVKR|YV 0.274 . cgd4_2190 506 KRYVVLK|NK 0.069 . cgd4_2190 508 YVVLKNK|KY 0.062 . cgd4_2190 509 VVLKNKK|YE 0.087 . cgd4_2190 535 FLTIFHK|FF 0.066 . cgd4_2190 538 IFHKFFR|KF 0.107 . cgd4_2190 539 FHKFFRK|FN 0.098 . cgd4_2190 545 KFNFSVK|SN 0.095 . ____________________________^_________________

  • Fasta :-

    >cgd4_2190 ATGAACCTTTTAATTTTTTTGATTACGACCTTATTCGTAATTATTAAGGGAAAAACGATC ACATTACCCTTGTATGGAAATGTACACAAATATGGTTATTACTTTATTAAAGTTAATGTG GGGTTTCCAATTACTCAGCAGCAGACTCTTATTATAGATACGGGAAGCTCTCTTACTGGC TTTGCATGTTCAGATTGTATTAACTGTGGAACACATGAAAATAAGCCATTTAATATTAAT TTGTCAGACACTAGTAATATTATTAAATGTAAGAGAAATAATACTCCAAATAACGAAACA GATATAATAAATAAAAGTATTCATGGAAGAATCAGTATGAATTATCCCAATTATAATAAG AGTTTTCTGAACAACAAATGCGTTTACGATATTAAATATTCAGAAGGTAGCCGTATACTT GGATACTTTTTTGAGGACTTTGTTGAATTTGAAAATAAGCTGTCGTCCAACTTGGAAATT AGACAGAAATTTAAGAATAAGTTCGTTTTCGGATGTAATATCATTGAAAATAACTTTTTT AAATTTCAAAAAGCATCAGGTATAATGGGCCTTGCAAACTTCAGTAATAAAGAAATGAAT CAAATAATCAACTATATTTTCAAAAGTGGTGAAGTAAGAAAAACTGATTCCGATAAAATA ATTTCAATTTTTTTTGAAAAGGATGGAGGAAAGTTAACTTTTGGGTCTACCTGCTTTGAT CAAACTAAAATGATGAATTATCCATTTGAAAATTATAATATTACGAGGTGTATTAATGAT GAAAGGTACTGTGCTTATATAAGCAAAATTGAAGTTGATTCAAATACCCGTGAATTAGAT ACCAAATTAAATGAAAGGTTGTTCAAAGCAATTTTTGATACAGGAACTACAATTTCAATT TTTCCTGCTAGATTATTTAAAAAAATTACCAGAGGTCTGTTTAATAATGTTTCAAAATAC TATCCAAAAATTTCTGGGCATGATGAAAAAGATGGTCTTACATGCTGGAGAATGCTCAAC GGGATTTCAACTGATAAATTTCCTAATATTAAAGTTGTGTTCAACAATAATAGAAATAAA TTGACGGAACAGTTAGTAATAAACTGGCCCCCAGAGTCTTATTTATACTTAAATAAAATT TTAGAAGGTAATATTAAAGTTTATTGTTTAGGAATAGCAAGTAATAACTTGATAAATTCA GAAATAGGGGCGGATAAGAATGGAGAAAACTCCTCTAGTAACGAAATAATACTTGGTGCT ACTTTTTTTATATACAAAGAGATCACTTTTATTTTGAATGAAAATAAAATCATGATAAGA TATAACTATCTAAATTCTAAAGATAGAAACGGCATCTTACCGAAAACTACGAATAATTTC CGACACAAATTAAATAACTCTAATTCCGATATAGGAGCCACAAACTATTATGAAGGAAAA TTGACGAATGCCCACGTAAGGGATATTCACAAAAATGTATTATCCAAAATACTGGTAAAA AGATATGTCGTTTTAAAAAACAAAAAATATGAGATTTGGGGGATTTTAATTTCTTCATCT CTAATAATAGCTATTTTATTTTCCTTTTTAACAATATTCCACAAGTTCTTTAGAAAATTC AATTTTTCAGTAAAAAGCAATTATGGAATTTAG
  • Download Fasta

  • Fasta :-

    MNLLIFLITTLFVIIKGKTITLPLYGNVHKYGYYFIKVNVGFPITQQQTLIIDTGSSLTG FACSDCINCGTHENKPFNINLSDTSNIIKCKRNNTPNNETDIINKSIHGRISMNYPNYNK SFLNNKCVYDIKYSEGSRILGYFFEDFVEFENKLSSNLEIRQKFKNKFVFGCNIIENNFF KFQKASGIMGLANFSNKEMNQIINYIFKSGEVRKTDSDKIISIFFEKDGGKLTFGSTCFD QTKMMNYPFENYNITRCINDERYCAYISKIEVDSNTRELDTKLNERLFKAIFDTGTTISI FPARLFKKITRGLFNNVSKYYPKISGHDEKDGLTCWRMLNGISTDKFPNIKVVFNNNRNK LTEQLVINWPPESYLYLNKILEGNIKVYCLGIASNNLINSEIGADKNGENSSSNEIILGA TFFIYKEITFILNENKIMIRYNYLNSKDRNGILPKTTNNFRHKLNNSNSDIGATNYYEGK LTNAHVRDIHKNVLSKILVKRYVVLKNKKYEIWGILISSSLIIAILFSFLTIFHKFFRKF NFSVKSNYGI

  • title: catalytic residue
  • coordinates: D53,D293
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd4_2190325 SYPKISGHDE0.992unspcgd4_2190543 SKFNFSVKSN0.992unsp

cgd4_2190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India