cgd4_4423 | OTU-like cysteine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd4_4423OTHER0.9999970.0000000.000003
No Results

  • Fasta :-

    >cgd4_4423 MDSDSQESKPSRRKVLQRQNQEVKALKEQWKKALASCNKKGSKKELDKEYQSKMEALQLS HKMELMKLSGEGNLENEEDSVEQSSENNRNIDDSNTNKLSLVEKLQTMDEVPSLYSNATF QVTKSEKRKKKRQKELEQKYMKSLEECALNNDRKGEIELEVINKKLKENNLKIFNISADG NCLFGSIKHQLEIKKKGLYSIKELRCIAVDYIESNRKTMEPFVLASVENTDITFEEYCDN IRNTNEWGGEVELVALSNSLEVPITVIRALNHRNESYGEQFYEEYEDDEENSVKENTLYI VYHIHLFANGPHYNSTISI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_4423.fa Sequence name : cgd4_4423 Sequence length : 319 VALUES OF COMPUTED PARAMETERS Coef20 : 3.788 CoefTot : 0.000 ChDiff : -9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.447 1.447 -0.040 0.504 MesoH : -1.561 -0.061 -0.587 0.073 MuHd_075 : 43.982 20.591 9.587 9.288 MuHd_095 : 23.931 17.569 7.918 4.980 MuHd_100 : 17.961 15.656 6.105 3.618 MuHd_105 : 7.151 9.984 3.259 1.273 Hmax_075 : 3.383 -0.700 -1.920 0.758 Hmax_095 : -11.500 0.300 -3.810 -0.920 Hmax_100 : -11.100 0.300 -3.810 -0.920 Hmax_105 : -20.183 -5.483 -6.942 -3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9119 0.0881 DFMC : 0.9245 0.0755
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 319 cgd4_4423 MDSDSQESKPSRRKVLQRQNQEVKALKEQWKKALASCNKKGSKKELDKEYQSKMEALQLSHKMELMKLSGEGNLENEEDS 80 VEQSSENNRNIDDSNTNKLSLVEKLQTMDEVPSLYSNATFQVTKSEKRKKKRQKELEQKYMKSLEECALNNDRKGEIELE 160 VINKKLKENNLKIFNISADGNCLFGSIKHQLEIKKKGLYSIKELRCIAVDYIESNRKTMEPFVLASVENTDITFEEYCDN 240 IRNTNEWGGEVELVALSNSLEVPITVIRALNHRNESYGEQFYEEYEDDEENSVKENTLYIVYHIHLFANGPHYNSTISI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >cgd4_4423 GACAAATTCAGATTTAGTCGAATTTTTAATTTTTAGGGACTAAAATATCAGAAAACCTGT TATAATTTTTGATTAGACGTATCTATTAGTTTAGATTGAAGTTAATGTTTCAAATACTAT TTAAAAGGAACTGGTAATTAATTAATAAATATTAAAATTCGTAATAAAAAAATGGACTCA GACTCTCAGGAAAGTAAGCCAAGCAGAAGAAAGGTTCTTCAGAGGCAAAATCAGGAAGTT AAGGCTTTAAAAGAGCAATGGAAGAAAGCCCTTGCTAGCTGTAATAAAAAGGGATCTAAA AAGGAGCTTGATAAAGAATATCAATCAAAGATGGAGGCACTACAACTATCTCATAAGATG GAACTAATGAAACTTTCTGGTGAAGGCAATTTAGAAAATGAAGAAGACTCTGTGGAGCAA TCTTCTGAAAATAATAGGAATATTGATGACTCCAATACAAATAAACTCAGTTTAGTGGAA AAACTTCAAACTATGGATGAAGTACCATCATTATATTCCAATGCAACCTTTCAAGTGACT AAGAGTGAAAAGCGAAAAAAGAAAAGGCAAAAAGAACTTGAACAGAAGTATATGAAAAGT CTGGAAGAATGCGCACTAAACAATGATAGAAAAGGCGAAATTGAACTTGAAGTAATAAAT AAAAAGCTTAAGGAAAATAATCTGAAAATTTTTAATATTAGTGCAGATGGAAACTGTCTT TTTGGCTCTATTAAACACCAACTAGAAATAAAAAAAAAAGGATTATACTCAATTAAAGAA CTGAGATGCATTGCAGTTGACTATATTGAATCAAATAGAAAGACTATGGAACCTTTTGTT CTAGCCTCAGTTGAGAATACAGATATAACATTTGAAGAATACTGCGATAATATAAGAAAT ACCAATGAATGGGGAGGTGAGGTTGAATTAGTTGCTCTTTCTAACTCTCTGGAAGTTCCA ATTACAGTTATTAGAGCATTAAATCACAGAAATGAATCATATGGTGAGCAATTCTATGAA GAATATGAAGATGATGAAGAAAATAGCGTTAAAGAAAATACTTTATATATAGTTTACCAT ATTCATCTTTTCGCAAATGGACCCCACTATAACTCAACTATTAGTATTTAA
  • Download Fasta

  • Fasta :-

    MDSDSQESKPSRRKVLQRQNQEVKALKEQWKKALASCNKKGSKKELDKEYQSKMEALQLS HKMELMKLSGEGNLENEEDSVEQSSENNRNIDDSNTNKLSLVEKLQTMDEVPSLYSNATF QVTKSEKRKKKRQKELEQKYMKSLEECALNNDRKGEIELEVINKKLKENNLKIFNISADG NCLFGSIKHQLEIKKKGLYSIKELRCIAVDYIESNRKTMEPFVLASVENTDITFEEYCDN IRNTNEWGGEVELVALSNSLEVPITVIRALNHRNESYGEQFYEEYEDDEENSVKENTLYI VYHIHLFANGPHYNSTISI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd4_4423125 SQVTKSEKRK0.996unspcgd4_4423125 SQVTKSEKRK0.996unspcgd4_4423125 SQVTKSEKRK0.996unspcgd4_4423200 SKGLYSIKEL0.996unspcgd4_4423276 SHRNESYGEQ0.996unspcgd4_4423292 SDEENSVKEN0.997unspcgd4_442342 SNKKGSKKEL0.997unspcgd4_442380 SNEEDSVEQS0.993unsp

cgd4_4423      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India