cgd5_1650 | DJ-1/PfpI

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_IDPredictionOTHERSPmTPCS_Position
cgd5_1650OTHER0.9989460.0008440.000209
No Results

  • Fasta :-

    >cgd5_1650 MPKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKRVMGAHGITIMGDKLLDEV LSEDYDLVMCPGGMDCAIKLGSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDV EKAVSYPSMMNELNRPDSSNAAVCVSSNVVTSQGPGTSVLFGLKLVEMLCGVEKSKLIAD TIVAA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_1650.fa Sequence name : cgd5_1650 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 3.665 CoefTot : -0.337 ChDiff : -4 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.465 0.134 0.530 MesoH : -0.260 0.476 -0.254 0.224 MuHd_075 : 9.971 5.470 3.287 1.876 MuHd_095 : 29.130 18.303 8.473 6.083 MuHd_100 : 31.748 18.716 9.747 6.225 MuHd_105 : 29.408 16.937 9.386 5.661 Hmax_075 : -0.262 7.233 -1.986 2.905 Hmax_095 : 8.750 13.912 0.755 5.180 Hmax_100 : 16.400 17.100 3.074 6.500 Hmax_105 : 15.800 17.100 3.088 6.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9520 0.0480 DFMC : 0.9593 0.0407
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 cgd5_1650 MPKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKRVMGAHGITIMGDKLLDEVLSEDYDLVMCPGGMDCAIKL 80 GSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDVEKAVSYPSMMNELNRPDSSNAAVCVSSNVVTSQGPGTSVL 160 FGLKLVEMLCGVEKSKLIADTIVAA 240 ................................................................................ 80 ................................................................................ 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_1650 3 ----MPK|KV 0.077 . cgd5_1650 4 ---MPKK|VL 0.092 . cgd5_1650 26 TPVDILR|RA 0.088 . cgd5_1650 27 PVDILRR|AD 0.097 . cgd5_1650 41 AVSGDCK|RV 0.076 . cgd5_1650 42 VSGDCKR|VM 0.226 . cgd5_1650 55 ITIMGDK|LL 0.067 . cgd5_1650 79 GMDCAIK|LG 0.063 . cgd5_1650 88 SDQNLLK|IL 0.062 . cgd5_1650 91 NLLKILR|ET 0.081 . cgd5_1650 94 KILRETK|KK 0.141 . cgd5_1650 95 ILRETKK|KG 0.108 . cgd5_1650 96 LRETKKK|GG 0.110 . cgd5_1650 113 PVIVFEK|NG 0.056 . cgd5_1650 122 LLSDVEK|AV 0.093 . cgd5_1650 135 MMNELNR|PD 0.097 . cgd5_1650 164 SVLFGLK|LV 0.062 . cgd5_1650 174 MLCGVEK|SK 0.076 . cgd5_1650 176 CGVEKSK|LI 0.065 . ____________________________^_________________

  • Fasta :-

    >cgd5_1650 ATGCCAAAAAAGGTTTTAGTTGCTCTCGCAAACGGATTCGAAGAAATTGAATTCGTAACT CCAGTTGATATTCTGAGAAGGGCGGACCTGAATGTTACAATAGCAGTTTCAGGAGATTGC AAAAGAGTTATGGGAGCACACGGGATAACTATTATGGGTGACAAGTTGTTGGATGAGGTA TTGTCTGAAGATTACGATTTAGTCATGTGCCCTGGCGGAATGGATTGCGCAATTAAGCTT GGGAGTGATCAAAATTTATTGAAAATATTGCGTGAAACGAAAAAAAAAGGTGGAATAATA GCTTCTATTTGTGCTTCTCCTGTTATTGTATTTGAGAAAAATGGTCTACTTTCAGACGTT GAAAAGGCAGTTAGTTATCCATCTATGATGAACGAACTTAATAGGCCAGACAGCTCAAAT GCAGCAGTTTGCGTGAGCTCTAATGTGGTAACCTCACAGGGACCAGGAACTTCTGTTTTA TTTGGTTTAAAGCTTGTAGAAATGTTGTGTGGAGTGGAAAAATCGAAGTTAATTGCAGAT ACAATAGTTGCAGCTTGA
  • Download Fasta

  • Fasta :-

    MPKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKRVMGAHGITIMGDKLLDEV LSEDYDLVMCPGGMDCAIKLGSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDV EKAVSYPSMMNELNRPDSSNAAVCVSSNVVTSQGPGTSVLFGLKLVEMLCGVEKSKLIAD TIVAA

  • title: conserved cys residue
  • coordinates: C104
No Results
No Results
No Results

cgd5_1650      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India