cgd5_1990 | Peptidase family M60 domain containing protein

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_IDPredictionOTHERSPmTPCS_Position
cgd5_1990OTHER0.9997000.0000510.000249
No Results

  • Fasta :-

    >cgd5_1990 MYSYYKLHPRLYPFNISYIKDQINLAVEYLIDMNSESKSPENMERGFREKWMANHGIAFC NYLILINLFGWNTLKTVFQVYDQLSEVDEELVQTHSNQQKMAMWIIIFSSVVGFNLKYFF TQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNKVSKDEIELGYEDLAVINGWK TWKLDSLEILLDIQC
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_1990.fa Sequence name : cgd5_1990 Sequence length : 195 VALUES OF COMPUTED PARAMETERS Coef20 : 3.453 CoefTot : -1.287 ChDiff : -5 ZoneTo : 20 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.388 1.565 0.068 0.659 MesoH : -0.132 0.410 -0.380 0.312 MuHd_075 : 25.612 11.063 5.779 3.950 MuHd_095 : 16.591 13.615 3.830 5.100 MuHd_100 : 19.405 11.084 4.662 5.709 MuHd_105 : 17.670 9.317 3.762 4.793 Hmax_075 : 10.733 7.900 1.858 4.083 Hmax_095 : 5.950 7.000 -0.206 3.815 Hmax_100 : 3.700 3.500 -1.206 2.960 Hmax_105 : 9.917 8.900 0.912 4.363 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8533 0.1467 DFMC : 0.8490 0.1510
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 195 cgd5_1990 MYSYYKLHPRLYPFNISYIKDQINLAVEYLIDMNSESKSPENMERGFREKWMANHGIAFCNYLILINLFGWNTLKTVFQV 80 YDQLSEVDEELVQTHSNQQKMAMWIIIFSSVVGFNLKYFFTQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNK 160 VSKDEIELGYEDLAVINGWKTWKLDSLEILLDIQC 240 ................................................................................ 80 ................................................................................ 160 ................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_1990 6 -MYSYYK|LH 0.052 . cgd5_1990 10 YYKLHPR|LY 0.076 . cgd5_1990 20 FNISYIK|DQ 0.058 . cgd5_1990 38 DMNSESK|SP 0.086 . cgd5_1990 45 SPENMER|GF 0.116 . cgd5_1990 48 NMERGFR|EK 0.213 . cgd5_1990 50 ERGFREK|WM 0.071 . cgd5_1990 75 FGWNTLK|TV 0.083 . cgd5_1990 100 THSNQQK|MA 0.111 . cgd5_1990 117 VVGFNLK|YF 0.066 . cgd5_1990 131 WWFCIER|AT 0.111 . cgd5_1990 144 IQSLCVR|IQ 0.093 . cgd5_1990 153 NHLINIK|GI 0.065 . cgd5_1990 158 IKGICVK|NK 0.060 . cgd5_1990 160 GICVKNK|VS 0.075 . cgd5_1990 163 VKNKVSK|DE 0.078 . cgd5_1990 180 AVINGWK|TW 0.052 . cgd5_1990 183 NGWKTWK|LD 0.060 . ____________________________^_________________

  • Fasta :-

    >cgd5_1990 GTTATCCAATAGCTACTCACTTAGATATAGTTGAAGAGCAGATCAATTCAGGTGGGATAC TCGACTTAAAAACGCTGAAAGATGAAGGGAACTGGGGAATATATCATGAAATAGGACATA ATAGGCAATCTAGTTATTGGACATTTAATGGAACGGAGGAAGTTACTGTTAATCTATTTA CAATGTATTCATATTATAAATTACATCCCAGATTGTATCCTTTTAACATTAGCTATATCA AAGATCAAATTAATCTTGCAGTAGAATACCTAATTGATATGAATTCCGAAAGTAAATCTC CAGAAAATATGGAACGGGGTTTCAGAGAAAAATGGATGGCAAACCATGGGATTGCATTTT GTAATTATTTGATTTTAATTAATTTATTTGGATGGAACACATTAAAGACAGTTTTCCAAG TATATGATCAGCTTTCAGAAGTTGATGAAGAATTAGTTCAAACACATAGTAATCAACAAA AGATGGCTATGTGGATAATTATCTTTTCTTCAGTTGTCGGATTCAATTTAAAGTACTTTT TTACACAATGGGGATGGTGGTTTTGCATTGAGCGCGCGACATCAGAAATTGACATCCAGT CATTGTGTGTAAGAATACAAAATCATTTAATAAATATAAAAGGAATTTGTGTGAAGAATA AGGTTTCAAAGGACGAAATTGAACTTGGGTACGAAGATTTAGCTGTTATAAACGGTTGGA AAACCTGGAAGCTTGATTCACTTGAAATATTACTAGATATTCAATGTTAG
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  • Fasta :-

    MYSYYKLHPRLYPFNISYIKDQINLAVEYLIDMNSESKSPENMERGFREKWMANHGIAFC NYLILINLFGWNTLKTVFQVYDQLSEVDEELVQTHSNQQKMAMWIIIFSSVVGFNLKYFF TQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNKVSKDEIELGYEDLAVINGWK TWKLDSLEILLDIQC

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd5_1990134 SERATSEIDI0.998unspcgd5_1990134 SERATSEIDI0.998unspcgd5_1990134 SERATSEIDI0.998unspcgd5_199039 SSESKSPENM0.997unspcgd5_199085 SYDQLSEVDE0.994unsp

cgd5_1990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India