cgd5_3220 | Proteasome subunit beta7 NTN hydrolase fold containing protein

_IDPredictionOTHERSPmTPCS_Position
cgd5_3220OTHER0.9594250.0003020.040273
No Results

  • Fasta :-

    >cgd5_3220 MLKVSQLRNNKGGVMSLGGETEQQRFDSTNIMEESKKNSSRVIVNSGSAVGIKYKDGIML ISSPLLCYGSMKMNSDISRFHVIGSGMIDLYDERQKLKSKDEDMSSVNTDKRPLVRKLTE VDEDAKVRFYEGKLSVIVSTGEFSDFQNIIERVEEKAAEDFFEGNFKSAKEYSGYISAVH YQRRNKMDPLLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIASGMAEYLAITLLRDKYK PDMSFDEAKLILEDCMKNSFYIECKGARMVQIATINQDGTRIYPKYPLDVTWRHDLFVKS NLDRKDYVGF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_3220.fa Sequence name : cgd5_3220 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 3.461 CoefTot : -0.924 ChDiff : -3 ZoneTo : 19 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.094 0.127 0.466 MesoH : -0.975 -0.021 -0.489 0.083 MuHd_075 : 9.094 4.072 0.943 0.693 MuHd_095 : 11.794 3.179 3.146 2.231 MuHd_100 : 6.344 6.777 1.865 1.119 MuHd_105 : 4.713 12.658 2.053 2.150 Hmax_075 : 3.500 2.900 -0.185 2.680 Hmax_095 : 6.475 4.813 -0.459 2.328 Hmax_100 : 4.600 5.900 -1.123 1.420 Hmax_105 : 6.400 13.600 -0.012 4.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9881 0.0119 DFMC : 0.9568 0.0432
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 cgd5_3220 MLKVSQLRNNKGGVMSLGGETEQQRFDSTNIMEESKKNSSRVIVNSGSAVGIKYKDGIMLISSPLLCYGSMKMNSDISRF 80 HVIGSGMIDLYDERQKLKSKDEDMSSVNTDKRPLVRKLTEVDEDAKVRFYEGKLSVIVSTGEFSDFQNIIERVEEKAAED 160 FFEGNFKSAKEYSGYISAVHYQRRNKMDPLLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIASGMAEYLAITLLRDKYK 240 PDMSFDEAKLILEDCMKNSFYIECKGARMVQIATINQDGTRIYPKYPLDVTWRHDLFVKSNLDRKDYVGF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_3220 3 ----MLK|VS 0.052 . cgd5_3220 8 LKVSQLR|NN 0.098 . cgd5_3220 11 SQLRNNK|GG 0.103 . cgd5_3220 25 GETEQQR|FD 0.111 . cgd5_3220 36 NIMEESK|KN 0.059 . cgd5_3220 37 IMEESKK|NS 0.118 . cgd5_3220 41 SKKNSSR|VI 0.117 . cgd5_3220 53 GSAVGIK|YK 0.081 . cgd5_3220 55 AVGIKYK|DG 0.071 . cgd5_3220 72 LCYGSMK|MN 0.079 . cgd5_3220 79 MNSDISR|FH 0.126 . cgd5_3220 94 IDLYDER|QK 0.069 . cgd5_3220 96 LYDERQK|LK 0.070 . cgd5_3220 98 DERQKLK|SK 0.087 . cgd5_3220 100 RQKLKSK|DE 0.071 . cgd5_3220 111 SSVNTDK|RP 0.057 . cgd5_3220 112 SVNTDKR|PL 0.199 . cgd5_3220 116 DKRPLVR|KL 0.096 . cgd5_3220 117 KRPLVRK|LT 0.110 . cgd5_3220 126 EVDEDAK|VR 0.056 . cgd5_3220 128 DEDAKVR|FY 0.135 . cgd5_3220 133 VRFYEGK|LS 0.070 . cgd5_3220 152 FQNIIER|VE 0.090 . cgd5_3220 156 IERVEEK|AA 0.088 . cgd5_3220 167 FFEGNFK|SA 0.075 . cgd5_3220 170 GNFKSAK|EY 0.083 . cgd5_3220 183 SAVHYQR|RN 0.069 . cgd5_3220 184 AVHYQRR|NK 0.153 . cgd5_3220 186 HYQRRNK|MD 0.097 . cgd5_3220 200 IIVAGLR|KD 0.081 . cgd5_3220 201 IVAGLRK|DG 0.105 . cgd5_3220 205 LRKDGSK|EI 0.072 . cgd5_3220 216 VDPLGTR|FD 0.086 . cgd5_3220 236 LAITLLR|DK 0.110 . cgd5_3220 238 ITLLRDK|YK 0.056 . cgd5_3220 240 LLRDKYK|PD 0.072 . cgd5_3220 249 MSFDEAK|LI 0.063 . cgd5_3220 257 ILEDCMK|NS 0.064 . cgd5_3220 265 SFYIECK|GA 0.081 . cgd5_3220 268 IECKGAR|MV 0.138 . cgd5_3220 281 INQDGTR|IY 0.088 . cgd5_3220 285 GTRIYPK|YP 0.072 . cgd5_3220 293 PLDVTWR|HD 0.076 . cgd5_3220 299 RHDLFVK|SN 0.071 . cgd5_3220 304 VKSNLDR|KD 0.103 . cgd5_3220 305 KSNLDRK|DY 0.094 . ____________________________^_________________

  • Fasta :-

    >cgd5_3220 ATGTTAAAGGTTTCTCAGCTAAGAAATAATAAAGGTGGAGTTATGAGTTTGGGAGGAGAG ACAGAACAACAGAGATTTGATTCAACAAATATTATGGAAGAAAGTAAAAAGAATTCTTCT AGAGTCATAGTAAACTCTGGTTCAGCTGTAGGAATCAAGTATAAAGATGGCATTATGCTA ATTTCAAGCCCTTTATTATGTTATGGATCAATGAAGATGAATTCTGATATTTCAAGGTTC CATGTAATTGGATCAGGAATGATTGATTTATATGATGAAAGACAAAAACTTAAAAGCAAA GATGAGGATATGAGTTCCGTTAATACTGATAAAAGACCATTGGTCAGAAAATTGACAGAA GTAGATGAAGATGCAAAAGTAAGATTTTATGAAGGAAAGCTTTCAGTAATAGTATCAACT GGGGAATTTAGTGATTTTCAAAACATTATTGAAAGAGTTGAAGAAAAAGCAGCTGAGGAC TTTTTTGAAGGAAATTTCAAATCTGCCAAGGAGTATAGTGGATATATTTCAGCAGTTCAT TATCAAAGAAGAAATAAGATGGATCCTTTATTGAATGATATAATAGTTGCAGGACTGCGA AAAGATGGAAGTAAAGAAATTTATTCAGTGGATCCATTAGGTACTAGATTTGATGAAGAC TTTATTGCTAGTGGAATGGCTGAGTATCTTGCAATTACATTACTTAGAGATAAATATAAG CCAGATATGAGCTTTGATGAAGCAAAATTGATCTTGGAAGATTGCATGAAAAACTCATTT TATATTGAATGCAAAGGAGCTAGAATGGTTCAGATTGCCACAATTAATCAAGATGGTACC AGAATTTACCCAAAGTATCCTCTTGATGTTACTTGGAGGCATGATCTTTTTGTCAAATCT AACTTGGATAGAAAAGACTATGTTGGATTTTAA
  • Download Fasta

  • Fasta :-

    MLKVSQLRNNKGGVMSLGGETEQQRFDSTNIMEESKKNSSRVIVNSGSAVGIKYKDGIML ISSPLLCYGSMKMNSDISRFHVIGSGMIDLYDERQKLKSKDEDMSSVNTDKRPLVRKLTE VDEDAKVRFYEGKLSVIVSTGEFSDFQNIIERVEEKAAEDFFEGNFKSAKEYSGYISAVH YQRRNKMDPLLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIASGMAEYLAITLLRDKYK PDMSFDEAKLILEDCMKNSFYIECKGARMVQIATINQDGTRIYPKYPLDVTWRHDLFVKS NLDRKDYVGF

    No Results
  • title: active site
  • coordinates: G47,S63,L65,R79
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd5_322099 SQKLKSKDED0.996unspcgd5_3220105 SDEDMSSVNT0.991unsp

cgd5_3220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India