cgd5_3960 | Secreted Alpha/Beta hydrolase

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_IDPredictionOTHERSPmTPCS_Position
cgd5_3960SP0.0158670.9839400.000193CS pos: 22-23. GSS-CV. Pr: 0.6892
No Results

  • Fasta :-

    >cgd5_3960 MNLKYVITLICFITLCFYQGSSCVIKSDFADLKSGRTFYTITKEEQKKRIVMVHGLLAAS TQFDNWRCIFSHTGYQVLTYDLLGHANTEWKLPGFFSQKRFVDQLNELLKHVGWVDSDNK AVEKISLLGVSMGGLIIINYALEHPDHISNLIPMCPPGIMTKYDFPKLYRLSNSSLVSAI KNIHNSKRVFRCGFYCASKLGYVKLGKQTKEEKKATTNVFHQMFSTYIKSGGDGNLFDRH LDFERLSKYENTFKIIFFWGMKDDVVPFPPALEFLVKHFSSTPIVVYPNIKHIPAYLMYS PALVTLDFLESNFTVGVPLGQVKELKYFYDNEVNIVTGLNFTISNEIIVKSNKENFTESY LDFMDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_3960.fa Sequence name : cgd5_3960 Sequence length : 366 VALUES OF COMPUTED PARAMETERS Coef20 : 4.261 CoefTot : -0.377 ChDiff : 5 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 1.853 0.517 0.695 MesoH : 0.048 0.588 -0.293 0.373 MuHd_075 : 19.797 16.874 8.928 3.979 MuHd_095 : 20.574 17.602 5.652 6.217 MuHd_100 : 19.557 18.804 5.994 5.938 MuHd_105 : 16.543 19.783 5.439 5.494 Hmax_075 : 17.967 22.517 7.184 7.292 Hmax_095 : 18.900 20.212 6.514 6.912 Hmax_100 : 19.600 23.600 5.679 7.780 Hmax_105 : 18.462 28.350 5.875 7.061 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4473 0.5527 DFMC : 0.6838 0.3162
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 366 cgd5_3960 MNLKYVITLICFITLCFYQGSSCVIKSDFADLKSGRTFYTITKEEQKKRIVMVHGLLAASTQFDNWRCIFSHTGYQVLTY 80 DLLGHANTEWKLPGFFSQKRFVDQLNELLKHVGWVDSDNKAVEKISLLGVSMGGLIIINYALEHPDHISNLIPMCPPGIM 160 TKYDFPKLYRLSNSSLVSAIKNIHNSKRVFRCGFYCASKLGYVKLGKQTKEEKKATTNVFHQMFSTYIKSGGDGNLFDRH 240 LDFERLSKYENTFKIIFFWGMKDDVVPFPPALEFLVKHFSSTPIVVYPNIKHIPAYLMYSPALVTLDFLESNFTVGVPLG 320 QVKELKYFYDNEVNIVTGLNFTISNEIIVKSNKENFTESYLDFMDY 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_3960 4 ---MNLK|YV 0.075 . cgd5_3960 26 GSSCVIK|SD 0.118 . cgd5_3960 33 SDFADLK|SG 0.072 . cgd5_3960 36 ADLKSGR|TF 0.095 . cgd5_3960 43 TFYTITK|EE 0.059 . cgd5_3960 47 ITKEEQK|KR 0.060 . cgd5_3960 48 TKEEQKK|RI 0.102 . cgd5_3960 49 KEEQKKR|IV 0.312 . cgd5_3960 67 TQFDNWR|CI 0.103 . cgd5_3960 91 HANTEWK|LP 0.059 . cgd5_3960 99 PGFFSQK|RF 0.062 . cgd5_3960 100 GFFSQKR|FV 0.343 . cgd5_3960 110 QLNELLK|HV 0.099 . cgd5_3960 120 WVDSDNK|AV 0.068 . cgd5_3960 124 DNKAVEK|IS 0.062 . cgd5_3960 162 PPGIMTK|YD 0.072 . cgd5_3960 167 TKYDFPK|LY 0.074 . cgd5_3960 170 DFPKLYR|LS 0.074 . cgd5_3960 181 SLVSAIK|NI 0.067 . cgd5_3960 187 KNIHNSK|RV 0.077 . cgd5_3960 188 NIHNSKR|VF 0.257 . cgd5_3960 191 NSKRVFR|CG 0.253 . cgd5_3960 199 GFYCASK|LG 0.059 . cgd5_3960 204 SKLGYVK|LG 0.054 . cgd5_3960 207 GYVKLGK|QT 0.063 . cgd5_3960 210 KLGKQTK|EE 0.067 . cgd5_3960 213 KQTKEEK|KA 0.069 . cgd5_3960 214 QTKEEKK|AT 0.143 . cgd5_3960 229 MFSTYIK|SG 0.106 . cgd5_3960 239 DGNLFDR|HL 0.101 . cgd5_3960 245 RHLDFER|LS 0.070 . cgd5_3960 248 DFERLSK|YE 0.094 . cgd5_3960 254 KYENTFK|II 0.062 . cgd5_3960 262 IFFWGMK|DD 0.057 . cgd5_3960 277 ALEFLVK|HF 0.068 . cgd5_3960 291 VVYPNIK|HI 0.067 . cgd5_3960 323 VPLGQVK|EL 0.060 . cgd5_3960 326 GQVKELK|YF 0.082 . cgd5_3960 350 SNEIIVK|SN 0.076 . cgd5_3960 353 IIVKSNK|EN 0.063 . ____________________________^_________________

  • Fasta :-

    >cgd5_3960 ATGAACTTGAAATACGTAATCACATTAATCTGTTTTATTACACTTTGCTTCTATCAAGGC TCCTCCTGTGTAATTAAATCTGATTTTGCAGATTTGAAATCCGGAAGAACTTTTTATACT ATAACTAAAGAAGAACAAAAAAAAAGAATTGTAATGGTACATGGTTTGTTAGCAGCTTCA ACCCAATTTGATAATTGGAGGTGTATATTTTCTCATACTGGTTATCAAGTTTTAACCTAT GATTTATTAGGACATGCTAACACTGAATGGAAACTTCCTGGTTTTTTCTCACAAAAAAGA TTTGTTGATCAATTAAATGAATTGCTTAAACATGTTGGGTGGGTTGATAGTGATAATAAA GCTGTAGAGAAGATTTCATTATTAGGTGTTTCAATGGGAGGATTAATCATTATCAATTAT GCATTAGAACACCCGGATCATATTAGTAACTTAATACCAATGTGCCCACCTGGAATAATG ACAAAATATGATTTTCCAAAATTATACAGATTATCAAATTCTTCTCTTGTTAGTGCCATT AAGAACATTCACAATTCTAAAAGAGTGTTTAGATGTGGATTTTATTGCGCCTCCAAATTG GGATATGTTAAATTGGGAAAACAAACTAAAGAAGAAAAAAAAGCCACTACGAACGTTTTT CACCAAATGTTCTCAACATATATTAAATCAGGCGGAGATGGCAACTTATTTGACAGACAT TTGGATTTTGAAAGATTATCCAAATACGAAAATACTTTTAAAATAATCTTCTTCTGGGGA ATGAAAGACGATGTAGTTCCTTTTCCTCCCGCATTGGAATTTCTAGTAAAGCATTTTAGC AGTACTCCTATAGTTGTTTACCCAAATATCAAACATATTCCTGCATATCTAATGTATTCC CCAGCTTTAGTTACTTTGGATTTTTTGGAGTCGAACTTCACAGTAGGAGTTCCTTTGGGT CAAGTTAAAGAATTAAAATATTTTTATGATAATGAAGTAAATATTGTTACAGGATTAAAC TTTACTATTTCTAATGAAATAATTGTTAAATCTAACAAAGAAAATTTTACTGAATCATAT TTAGACTTTATGGATTATTGA
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  • Fasta :-

    MNLKYVITLICFITLCFYQGSSCVIKSDFADLKSGRTFYTITKEEQKKRIVMVHGLLAAS TQFDNWRCIFSHTGYQVLTYDLLGHANTEWKLPGFFSQKRFVDQLNELLKHVGWVDSDNK AVEKISLLGVSMGGLIIINYALEHPDHISNLIPMCPPGIMTKYDFPKLYRLSNSSLVSAI KNIHNSKRVFRCGFYCASKLGYVKLGKQTKEEKKATTNVFHQMFSTYIKSGGDGNLFDRH LDFERLSKYENTFKIIFFWGMKDDVVPFPPALEFLVKHFSSTPIVVYPNIKHIPAYLMYS PALVTLDFLESNFTVGVPLGQVKELKYFYDNEVNIVTGLNFTISNEIIVKSNKENFTESY LDFMDY

    No Results
No Results
No Results
IDSitePeptideScoreMethod
cgd5_3960247 SFERLSKYEN0.997unsp

cgd5_3960      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India