-
Computed_GO_Component_IDs:
-
Computed_GO_Components:
-
Computed_GO_Function_IDs:
-
Computed_GO_Functions:
-
Computed_GO_Process_IDs:
-
Computed_GO_Processes:
-
Curated_GO_Component_IDs:
-
Curated_GO_Components:
-
Curated_GO_Function_IDs:
-
Curated_GO_Functions:
-
Curated_GO_Processes:
No Results
-
Fasta :-
>cgd5_783
MVKKKNKKNKKEINKEVLKNAGFDEGEIWRLDFKGEVEFEENVIDQSRFEVPLFDLKGYR
SQKKIGKPMGQDIEMEKKHDSDDEREDSEAFDAAAEDDFDEYDVEQQKVDESRFLQKRFE
FEVDYMKKLRVWEASFFIHTSENLENTPQEFFYVIEFGHVNPERNYEGTLKRMMVYTAAT
LLKPGEVKVLTFPIIVWPKKILYISYSELEMFQISIKLWTIGTFTFNQLLASVKLTLKDV
LENDPETHLMFKKHLPAPLGKDGKPRKDLNQKSFEVHRSRVTLQLQEIFDFDISLENWSF
IPNKKLPIEIKKAPKFLRLKVPLNNDITSGMSSRSKLKCNKFL
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_783.fa
Sequence name : cgd5_783
Sequence length : 343
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.208
CoefTot : -1.059
ChDiff : -2
ZoneTo : 11
KR : 7
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.941 1.300 -0.080 0.546
MesoH : -0.043 0.628 -0.321 0.321
MuHd_075 : 11.489 13.947 4.662 4.047
MuHd_095 : 33.405 20.981 9.999 7.541
MuHd_100 : 22.767 14.288 7.704 5.633
MuHd_105 : 10.051 5.417 4.360 2.986
Hmax_075 : -20.562 1.313 -7.345 -0.472
Hmax_095 : -10.587 2.013 -5.184 0.752
Hmax_100 : -18.300 -1.500 -7.001 -0.200
Hmax_105 : -22.400 -5.300 -8.363 -0.630
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.7767 0.2233
DFMC : 0.7857 0.2143
-
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
343 cgd5_783
MVKKKNKKNKKEINKEVLKNAGFDEGEIWRLDFKGEVEFEENVIDQSRFEVPLFDLKGYRSQKKIGKPMGQDIEMEKKHD 80
SDDEREDSEAFDAAAEDDFDEYDVEQQKVDESRFLQKRFEFEVDYMKKLRVWEASFFIHTSENLENTPQEFFYVIEFGHV 160
NPERNYEGTLKRMMVYTAATLLKPGEVKVLTFPIIVWPKKILYISYSELEMFQISIKLWTIGTFTFNQLLASVKLTLKDV 240
LENDPETHLMFKKHLPAPLGKDGKPRKDLNQKSFEVHRSRVTLQLQEIFDFDISLENWSFIPNKKLPIEIKKAPKFLRLK 320
VPLNNDITSGMSSRSKLKCNKFL 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
....................... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
cgd5_783 3 ----MVK|KK 0.061 .
cgd5_783 4 ---MVKK|KN 0.101 .
cgd5_783 5 --MVKKK|NK 0.106 .
cgd5_783 7 MVKKKNK|KN 0.071 .
cgd5_783 8 VKKKNKK|NK 0.099 .
cgd5_783 10 KKNKKNK|KE 0.093 .
cgd5_783 11 KNKKNKK|EI 0.126 .
cgd5_783 15 NKKEINK|EV 0.068 .
cgd5_783 19 INKEVLK|NA 0.074 .
cgd5_783 30 DEGEIWR|LD 0.093 .
cgd5_783 34 IWRLDFK|GE 0.062 .
cgd5_783 48 NVIDQSR|FE 0.081 .
cgd5_783 57 VPLFDLK|GY 0.060 .
cgd5_783 60 FDLKGYR|SQ 0.114 .
cgd5_783 63 KGYRSQK|KI 0.190 .
cgd5_783 64 GYRSQKK|IG 0.109 .
cgd5_783 67 SQKKIGK|PM 0.084 .
cgd5_783 77 QDIEMEK|KH 0.057 .
cgd5_783 78 DIEMEKK|HD 0.107 .
cgd5_783 85 HDSDDER|ED 0.127 .
cgd5_783 108 YDVEQQK|VD 0.057 .
cgd5_783 113 QKVDESR|FL 0.119 .
cgd5_783 117 ESRFLQK|RF 0.074 .
cgd5_783 118 SRFLQKR|FE 0.241 .
cgd5_783 127 FEVDYMK|KL 0.062 .
cgd5_783 128 EVDYMKK|LR 0.070 .
cgd5_783 130 DYMKKLR|VW 0.127 .
cgd5_783 164 GHVNPER|NY 0.124 .
cgd5_783 171 NYEGTLK|RM 0.056 .
cgd5_783 172 YEGTLKR|MM 0.142 .
cgd5_783 183 TAATLLK|PG 0.074 .
cgd5_783 188 LKPGEVK|VL 0.056 .
cgd5_783 199 PIIVWPK|KI 0.060 .
cgd5_783 200 IIVWPKK|IL 0.101 .
cgd5_783 217 MFQISIK|LW 0.072 .
cgd5_783 234 QLLASVK|LT 0.058 .
cgd5_783 238 SVKLTLK|DV 0.070 .
cgd5_783 252 ETHLMFK|KH 0.059 .
cgd5_783 253 THLMFKK|HL 0.102 .
cgd5_783 261 LPAPLGK|DG 0.069 .
cgd5_783 264 PLGKDGK|PR 0.058 .
cgd5_783 266 GKDGKPR|KD 0.098 .
cgd5_783 267 KDGKPRK|DL 0.136 .
cgd5_783 272 RKDLNQK|SF 0.083 .
cgd5_783 278 KSFEVHR|SR 0.125 .
cgd5_783 280 FEVHRSR|VT 0.089 .
cgd5_783 304 WSFIPNK|KL 0.068 .
cgd5_783 305 SFIPNKK|LP 0.086 .
cgd5_783 311 KLPIEIK|KA 0.068 .
cgd5_783 312 LPIEIKK|AP 0.079 .
cgd5_783 315 EIKKAPK|FL 0.068 .
cgd5_783 318 KAPKFLR|LK 0.083 .
cgd5_783 320 PKFLRLK|VP 0.052 .
cgd5_783 334 TSGMSSR|SK 0.148 .
cgd5_783 336 GMSSRSK|LK 0.067 .
cgd5_783 338 SSRSKLK|CN 0.064 .
cgd5_783 341 SKLKCNK|FL 0.071 .
____________________________^_________________
-
Fasta :-
>cgd5_783
TTTTTGTTTAAGTTATTAAGCATCTAAAGATGGTTAAAAAGAAGAATAAGAAAAACAAAA
AAGAAATAAATAAGGAAGTGCTTAAAAATGCAGGATTTGATGAAGGCGAGATTTGGAGGT
TAGACTTCAAAGGTGAGGTGGAATTTGAAGAAAATGTGATTGACCAAAGTAGATTTGAAG
TTCCTTTATTCGATTTGAAGGGTTACAGAAGTCAAAAAAAAATAGGTAAACCAATGGGAC
AAGATATTGAAATGGAAAAAAAACATGACTCAGATGATGAACGCGAAGATTCAGAAGCTT
TTGATGCTGCTGCGGAGGACGATTTTGATGAATATGATGTTGAGCAACAAAAAGTTGATG
AATCCAGATTTCTGCAAAAACGATTTGAATTCGAGGTTGATTATATGAAGAAACTCAGAG
TATGGGAAGCTTCTTTTTTTATTCATACTAGTGAAAATCTAGAAAATACACCACAAGAAT
TCTTCTATGTTATTGAATTTGGGCATGTTAATCCAGAGAGAAACTACGAAGGAACTTTAA
AGAGAATGATGGTTTATACAGCTGCGACTTTATTAAAACCAGGAGAAGTAAAAGTATTAA
CTTTCCCGATTATCGTTTGGCCAAAAAAGATCTTATATATATCGTATTCTGAATTAGAGA
TGTTTCAAATATCCATTAAGCTCTGGACAATTGGAACCTTTACTTTCAACCAACTGCTTG
CTTCAGTCAAACTTACACTCAAAGATGTACTGGAAAACGATCCAGAAACTCATTTAATGT
TTAAAAAGCATCTTCCTGCACCTTTGGGAAAGGATGGAAAACCTCGTAAAGATCTTAACC
AAAAAAGTTTTGAAGTGCATAGAAGCAGAGTAACTTTACAGTTACAAGAAATTTTTGATT
TTGATATTTCCTTGGAAAATTGGAGTTTTATTCCTAATAAGAAACTTCCTATTGAAATTA
AAAAAGCACCCAAATTTTTGAGACTAAAGGTACCTTTAAATAATGATATAACTTCAGGAA
TGTCTTCTAGGAGTAAGTTGAAATGTAATAAATTTCTTTAAACATTAATAT
- Download Fasta