cgd6_3820 | Aspartic peptidase A1 family

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_IDPredictionOTHERSPmTPCS_Position
cgd6_3820SP0.0061990.9936110.000190CS pos: 18-19. AFC-EG. Pr: 0.5188
No Results

  • Fasta :-

    >cgd6_3820 MVFQVFFILMMLKISAFCEGLSNKIRSNARAELGMEAILSNGLFNSNAQKVELKLSLSEG GMKYSEGNYFSRWITKSKYSETMDSQDLRNYQNSQYFGKIEVGTPPREFVVIFDTGSSSV WIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQYGTGSCVLKFGKEVINIGKLK IEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV YISRDSSTPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDC KAAIDTGSSVSTAPSSFMRKITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQD YVIDEGGPSSFNAFSYYWGPQEHYCSIGYIPLDIPAPRGPLFVLGNNFIRKYYSIFDRDN LMVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_3820.fa Sequence name : cgd6_3820 Sequence length : 467 VALUES OF COMPUTED PARAMETERS Coef20 : 4.476 CoefTot : 0.229 ChDiff : 0 ZoneTo : 18 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.535 2.612 0.499 0.898 MesoH : -0.085 0.612 -0.272 0.299 MuHd_075 : 18.135 8.649 2.326 3.650 MuHd_095 : 9.721 8.099 3.172 2.271 MuHd_100 : 5.037 4.315 1.705 1.345 MuHd_105 : 6.293 6.762 3.909 0.660 Hmax_075 : 21.787 22.700 3.863 7.820 Hmax_095 : 22.662 21.262 4.674 7.201 Hmax_100 : 23.300 24.200 4.621 7.130 Hmax_105 : 18.783 24.033 3.946 7.257 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9619 0.0381 DFMC : 0.9284 0.0716
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 467 cgd6_3820 MVFQVFFILMMLKISAFCEGLSNKIRSNARAELGMEAILSNGLFNSNAQKVELKLSLSEGGMKYSEGNYFSRWITKSKYS 80 ETMDSQDLRNYQNSQYFGKIEVGTPPREFVVIFDTGSSSVWIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQY 160 GTGSCVLKFGKEVINIGKLKIEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV 240 YISRDSSTPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDCKAAIDTGSSVSTAPSSFMRK 320 ITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQDYVIDEGGPSSFNAFSYYWGPQEHYCSIGYIPLDIPAPRGP 400 LFVLGNNFIRKYYSIFDRDNLMVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd6_3820 13 FILMMLK|IS 0.057 . cgd6_3820 24 CEGLSNK|IR 0.063 . cgd6_3820 26 GLSNKIR|SN 0.250 . cgd6_3820 30 KIRSNAR|AE 0.092 . cgd6_3820 50 FNSNAQK|VE 0.057 . cgd6_3820 54 AQKVELK|LS 0.062 . cgd6_3820 63 LSEGGMK|YS 0.068 . cgd6_3820 72 EGNYFSR|WI 0.129 . cgd6_3820 76 FSRWITK|SK 0.090 . cgd6_3820 78 RWITKSK|YS 0.082 . cgd6_3820 89 MDSQDLR|NY 0.101 . cgd6_3820 99 NSQYFGK|IE 0.063 . cgd6_3820 107 EVGTPPR|EF 0.087 . cgd6_3820 128 IPSIECK|HK 0.100 . cgd6_3820 130 SIECKHK|GC 0.080 . cgd6_3820 137 GCEPHNK|YD 0.070 . cgd6_3820 141 HNKYDPK|LS 0.071 . cgd6_3820 148 LSTSYQK|LG 0.067 . cgd6_3820 168 TGSCVLK|FG 0.086 . cgd6_3820 171 CVLKFGK|EV 0.074 . cgd6_3820 178 EVINIGK|LK 0.057 . cgd6_3820 180 INIGKLK|IE 0.081 . cgd6_3820 213 GLGFPDK|NS 0.059 . cgd6_3820 216 FPDKNSK|KN 0.057 . cgd6_3820 217 PDKNSKK|NN 0.099 . cgd6_3820 228 TIVENIK|ER 0.059 . cgd6_3820 230 VENIKER|NI 0.088 . cgd6_3820 235 ERNILPR|NL 0.141 . cgd6_3820 244 FGVYISR|DS 0.095 . cgd6_3820 260 FGAADPK|YT 0.078 . cgd6_3820 267 YTISGQK|IT 0.066 . cgd6_3820 272 QKITWHR|LT 0.103 . cgd6_3820 282 SHYWEIK|IK 0.075 . cgd6_3820 284 YWEIKIK|DI 0.089 . cgd6_3820 287 IKIKDIK|IN 0.071 . cgd6_3820 301 YCFGDCK|AA 0.070 . cgd6_3820 319 APSSFMR|KI 0.207 . cgd6_3820 320 PSSFMRK|IT 0.113 . cgd6_3820 323 FMRKITK|VI 0.065 . cgd6_3820 333 MEGECNR|YL 0.104 . cgd6_3820 339 RYLSSPR|IT 0.104 . cgd6_3820 398 LDIPAPR|GP 0.090 . cgd6_3820 410 LGNNFIR|KY 0.093 . cgd6_3820 411 GNNFIRK|YY 0.119 . cgd6_3820 418 YYSIFDR|DN 0.145 . cgd6_3820 429 VGFTLAK|HS 0.062 . cgd6_3820 432 TLAKHSK|YG 0.069 . cgd6_3820 449 NSESVLK|MA 0.074 . ____________________________^_________________

  • Fasta :-

    >cgd6_3820 ATGGTGTTTCAAGTGTTTTTTATTTTAATGATGCTGAAAATATCAGCTTTTTGTGAAGGA TTATCAAACAAGATTAGGTCAAATGCTAGGGCAGAGTTAGGAATGGAGGCTATACTAAGT AATGGCTTATTTAATTCAAATGCTCAAAAAGTTGAGTTAAAATTAAGTCTATCTGAGGGA GGAATGAAATATTCAGAAGGCAACTATTTTTCAAGGTGGATTACCAAGAGTAAGTATTCA GAGACAATGGACTCTCAGGATCTTAGAAATTACCAAAATAGTCAATATTTTGGTAAAATT GAGGTGGGAACGCCTCCAAGAGAGTTCGTTGTCATTTTTGATACAGGAAGCTCCAGTGTA TGGATTCCAAGTATTGAATGTAAGCATAAAGGTTGTGAGCCCCACAACAAGTATGATCCA AAGTTGAGTACCTCTTATCAAAAATTGGGGGATGGATCATTGGAGACATATATCCAATAT GGTACGGGTTCTTGTGTGTTAAAGTTTGGTAAAGAAGTCATAAATATTGGAAAGCTGAAG ATAGAAGATCAGTCTTTCGGGATGGCTATTGAGGAAAGTACATCTCCTTTTGCTGAATTA CCATTCGATGGTTTGGTAGGACTTGGATTTCCAGATAAGAACAGTAAAAAAAATAATATC CCAACAATTGTTGAGAATATTAAAGAACGAAACATTTTACCAAGAAATCTTTTTGGAGTT TACATTTCCAGAGATTCAAGTACTCCAGGTTCAATTTCTTTTGGAGCTGCTGATCCTAAA TACACAATAAGTGGTCAAAAAATAACCTGGCATCGACTTACTGGGTCTCATTACTGGGAA ATCAAGATCAAAGATATAAAGATTAATGGGGTTAGCACGAACTATTGCTTCGGGGACTGC AAGGCAGCTATAGATACTGGTTCATCTGTCTCCACAGCCCCAAGTAGTTTTATGAGAAAG ATCACCAAAGTTATACCCATGGAGGGAGAATGTAATAGATATCTATCTTCTCCTAGAATA ACTTATGTGATAGAAGATATTCATGGAAATGAGATAGAAATGCATATGGATCCTCAAGAC TATGTAATTGATGAAGGAGGGCCTTCATCATTTAATGCTTTTAGCTATTATTGGGGCCCG CAAGAACATTATTGTAGCATTGGATATATCCCTCTTGATATTCCAGCTCCTAGAGGTCCA CTTTTTGTACTTGGAAATAACTTCATTCGAAAGTACTACTCAATATTTGATAGAGATAAC CTAATGGTGGGCTTCACATTGGCAAAACATAGTAAATATGGGCCTATGTTCATCTCATTA TCATCCAATTCAGAATCTGTTCTTAAAATGGCTACATTTGGAATAACCATTATCCTCAGC CTGCTACTATTTATTATTTATTAA
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  • Fasta :-

    MVFQVFFILMMLKISAFCEGLSNKIRSNARAELGMEAILSNGLFNSNAQKVELKLSLSEG GMKYSEGNYFSRWITKSKYSETMDSQDLRNYQNSQYFGKIEVGTPPREFVVIFDTGSSSV WIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQYGTGSCVLKFGKEVINIGKLK IEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV YISRDSSTPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDC KAAIDTGSSVSTAPSSFMRKITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQD YVIDEGGPSSFNAFSYYWGPQEHYCSIGYIPLDIPAPRGPLFVLGNNFIRKYYSIFDRDN LMVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY

  • title: inhibitor binding site
  • coordinates: D114,G116,S118,Y157,I158,Q159,L205
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_3820246 SISRDSSTPG0.992unspcgd6_3820247 SSRDSSTPGS0.993unsp

cgd6_3820      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India