cgd6_4080 | Serine aminopeptidase S33

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd6_4080OTHER0.9999120.0000200.000067
No Results

  • Fasta :-

    >cgd6_4080 MNQFIDEYSVSPDHYCKEKKFSSTRFQSEKSGLMQCYHYFKVEPNQTRKGTALLIHGYSC HTLSEYMNIVENKDLEYNETDISKNHCTRNKNNDNNTPFNKSQFVTTYNGSYIEYFNKKG YDVISLDLEGHGFSQGSKCNTENLDNNCFNIIQMLKIELLKHSGDKNNELKNFQVSSHSW NNEITTNYDIKYEEKGKSDKENEFFLYSSKIHKVNVKDTINNLRTKICIHCSDTGCCFKD TFGEKIIICGISMGGAIALRLAEYIGQICQEDNLDGFQDKSIVKCLRSRLVCIVLLSPML SLESIKKKTINKIMLPLLPIASYLFPNLQIGSRINNPVCEYITSFSKCDPLYYSKRVKAL MCKSLLNYTDAVRDNLNYYPIDVPLLICHCVHDILTDFEGSESTISYFNQSINQIQQFES TESNIESEFVLWPITCKKMSHILTREIGFQDLIEKILEWVSKKESLHESKCKSLRRSEKN SEPLFKSIKNKPFLRQNLNKNIQVSN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_4080.fa Sequence name : cgd6_4080 Sequence length : 506 VALUES OF COMPUTED PARAMETERS Coef20 : 2.851 CoefTot : -0.289 ChDiff : 3 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.965 0.380 0.632 MesoH : -0.420 0.661 -0.215 0.230 MuHd_075 : 33.707 23.000 10.064 6.416 MuHd_095 : 38.300 18.778 12.395 5.847 MuHd_100 : 37.328 16.876 11.455 6.194 MuHd_105 : 26.454 9.267 7.545 4.770 Hmax_075 : 7.350 7.233 -0.671 3.943 Hmax_095 : 11.900 8.000 2.384 4.170 Hmax_100 : 10.600 7.500 2.117 4.170 Hmax_105 : 0.700 -0.233 -0.195 1.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9667 0.0333 DFMC : 0.9722 0.0278
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 506 cgd6_4080 MNQFIDEYSVSPDHYCKEKKFSSTRFQSEKSGLMQCYHYFKVEPNQTRKGTALLIHGYSCHTLSEYMNIVENKDLEYNET 80 DISKNHCTRNKNNDNNTPFNKSQFVTTYNGSYIEYFNKKGYDVISLDLEGHGFSQGSKCNTENLDNNCFNIIQMLKIELL 160 KHSGDKNNELKNFQVSSHSWNNEITTNYDIKYEEKGKSDKENEFFLYSSKIHKVNVKDTINNLRTKICIHCSDTGCCFKD 240 TFGEKIIICGISMGGAIALRLAEYIGQICQEDNLDGFQDKSIVKCLRSRLVCIVLLSPMLSLESIKKKTINKIMLPLLPI 320 ASYLFPNLQIGSRINNPVCEYITSFSKCDPLYYSKRVKALMCKSLLNYTDAVRDNLNYYPIDVPLLICHCVHDILTDFEG 400 SESTISYFNQSINQIQQFESTESNIESEFVLWPITCKKMSHILTREIGFQDLIEKILEWVSKKESLHESKCKSLRRSEKN 480 SEPLFKSIKNKPFLRQNLNKNIQVSN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd6_4080 17 SPDHYCK|EK 0.059 . cgd6_4080 19 DHYCKEK|KF 0.072 . cgd6_4080 20 HYCKEKK|FS 0.156 . cgd6_4080 25 KKFSSTR|FQ 0.108 . cgd6_4080 30 TRFQSEK|SG 0.083 . cgd6_4080 41 QCYHYFK|VE 0.056 . cgd6_4080 48 VEPNQTR|KG 0.086 . cgd6_4080 49 EPNQTRK|GT 0.096 . cgd6_4080 73 MNIVENK|DL 0.112 . cgd6_4080 84 NETDISK|NH 0.056 . cgd6_4080 89 SKNHCTR|NK 0.102 . cgd6_4080 91 NHCTRNK|NN 0.064 . cgd6_4080 101 NNTPFNK|SQ 0.073 . cgd6_4080 118 YIEYFNK|KG 0.062 . cgd6_4080 119 IEYFNKK|GY 0.113 . cgd6_4080 138 GFSQGSK|CN 0.069 . cgd6_4080 156 NIIQMLK|IE 0.051 . cgd6_4080 161 LKIELLK|HS 0.074 . cgd6_4080 166 LKHSGDK|NN 0.069 . cgd6_4080 171 DKNNELK|NF 0.067 . cgd6_4080 191 TTNYDIK|YE 0.087 . cgd6_4080 195 DIKYEEK|GK 0.081 . cgd6_4080 197 KYEEKGK|SD 0.083 . cgd6_4080 200 EKGKSDK|EN 0.069 . cgd6_4080 210 FFLYSSK|IH 0.055 . cgd6_4080 213 YSSKIHK|VN 0.063 . cgd6_4080 217 IHKVNVK|DT 0.085 . cgd6_4080 224 DTINNLR|TK 0.074 . cgd6_4080 226 INNLRTK|IC 0.070 . cgd6_4080 239 DTGCCFK|DT 0.074 . cgd6_4080 245 KDTFGEK|II 0.071 . cgd6_4080 260 GGAIALR|LA 0.102 . cgd6_4080 280 LDGFQDK|SI 0.110 . cgd6_4080 284 QDKSIVK|CL 0.061 . cgd6_4080 287 SIVKCLR|SR 0.097 . cgd6_4080 289 VKCLRSR|LV 0.117 . cgd6_4080 306 LSLESIK|KK 0.061 . cgd6_4080 307 SLESIKK|KT 0.095 . cgd6_4080 308 LESIKKK|TI 0.171 . cgd6_4080 312 KKKTINK|IM 0.061 . cgd6_4080 333 NLQIGSR|IN 0.080 . cgd6_4080 347 YITSFSK|CD 0.050 . cgd6_4080 355 DPLYYSK|RV 0.061 . cgd6_4080 356 PLYYSKR|VK 0.125 . cgd6_4080 358 YYSKRVK|AL 0.066 . cgd6_4080 363 VKALMCK|SL 0.076 . cgd6_4080 373 NYTDAVR|DN 0.070 . cgd6_4080 437 LWPITCK|KM 0.069 . cgd6_4080 438 WPITCKK|MS 0.107 . cgd6_4080 445 MSHILTR|EI 0.150 . cgd6_4080 455 FQDLIEK|IL 0.060 . cgd6_4080 462 ILEWVSK|KE 0.069 . cgd6_4080 463 LEWVSKK|ES 0.093 . cgd6_4080 470 ESLHESK|CK 0.060 . cgd6_4080 472 LHESKCK|SL 0.111 . cgd6_4080 475 SKCKSLR|RS 0.097 . cgd6_4080 476 KCKSLRR|SE 0.245 . cgd6_4080 479 SLRRSEK|NS 0.215 . cgd6_4080 486 NSEPLFK|SI 0.098 . cgd6_4080 489 PLFKSIK|NK 0.056 . cgd6_4080 491 FKSIKNK|PF 0.077 . cgd6_4080 495 KNKPFLR|QN 0.086 . cgd6_4080 500 LRQNLNK|NI 0.083 . ____________________________^_________________

  • Fasta :-

    >cgd6_4080 TTAATAAAACCAAAAAAATTACAGATTCAGAAACATAGCACATATTAAAGTTAAAAAAGT AAACGCCGTTTATTGAAAGCTAATTGATCAGTTTTATTTGTTGTTGTATATTGGGGAAGG GAAATTTTTTATATAAGCACTGAATTACAGAAATTAATAGGGTAAATACATAAGAATCAA GACAATTACTTTAGAAAAAAAGAAGAATATGAACCAATTTATCGACGAGTACTCTGTTTC CCCTGATCATTACTGTAAAGAGAAAAAGTTCTCTTCCACCAGATTTCAAAGTGAAAAGAG CGGATTAATGCAATGTTACCACTACTTTAAAGTTGAACCAAACCAAACAAGGAAAGGAAC AGCTTTGTTAATACATGGCTATTCTTGTCATACTTTATCTGAATATATGAATATTGTGGA GAATAAAGATTTAGAATACAATGAAACTGATATTTCCAAAAATCATTGTACTCGAAATAA AAATAATGATAATAATACTCCCTTCAATAAGTCTCAATTTGTTACAACTTATAATGGAAG CTATATTGAGTACTTCAATAAAAAAGGTTATGATGTTATATCACTAGATTTAGAAGGTCA TGGATTTTCACAAGGTTCTAAGTGTAACACTGAAAATTTGGATAATAACTGTTTTAACAT CATACAAATGTTGAAAATTGAATTACTTAAACATTCTGGTGATAAAAATAACGAACTGAA GAATTTTCAAGTTTCATCACATTCTTGGAATAATGAAATTACTACTAATTATGATATAAA ATATGAAGAAAAAGGCAAAAGCGATAAAGAAAATGAATTTTTTCTATATTCTTCCAAAAT ACACAAAGTTAACGTTAAAGACACTATTAACAACTTAAGAACAAAAATATGTATTCATTG TTCTGACACAGGATGTTGCTTCAAAGATACCTTTGGAGAAAAAATTATTATCTGTGGTAT TTCAATGGGTGGAGCTATTGCTTTAAGACTTGCTGAGTACATTGGTCAAATATGCCAAGA AGATAATCTGGATGGGTTTCAAGATAAATCAATTGTTAAATGCTTAAGGTCAAGATTAGT TTGCATTGTCCTACTTTCCCCTATGTTAAGCTTGGAATCTATTAAGAAAAAAACAATAAA TAAAATCATGCTTCCCTTACTACCAATCGCATCCTATTTATTCCCAAATTTACAAATTGG ATCTAGAATAAATAATCCAGTTTGTGAGTATATCACTTCCTTTTCTAAATGTGATCCTTT ATACTACAGTAAAAGAGTCAAGGCTCTAATGTGTAAAAGTCTTTTGAATTATACTGATGC AGTCAGAGATAATTTAAATTATTATCCAATTGATGTTCCTCTATTAATATGTCATTGTGT CCATGACATATTGACAGACTTTGAAGGAAGTGAAAGTACTATTAGTTATTTTAATCAATC AATCAATCAAATCCAACAATTTGAATCTACCGAAAGTAATATAGAATCAGAATTTGTACT ATGGCCAATTACTTGTAAGAAAATGTCGCATATTCTAACCAGAGAAATAGGATTTCAGGA TTTAATTGAAAAAATTTTAGAATGGGTATCTAAAAAAGAGTCTTTGCACGAAAGCAAGTG TAAAAGTTTGAGAAGATCGGAAAAAAATAGCGAACCGCTTTTCAAATCAATAAAAAATAA GCCATTTTTAAGACAAAATCTAAATAAAAACATTCAGGTATCTAATTAA
  • Download Fasta

  • Fasta :-

    MNQFIDEYSVSPDHYCKEKKFSSTRFQSEKSGLMQCYHYFKVEPNQTRKGTALLIHGYSC HTLSEYMNIVENKDLEYNETDISKNHCTRNKNNDNNTPFNKSQFVTTYNGSYIEYFNKKG YDVISLDLEGHGFSQGSKCNTENLDNNCFNIIQMLKIELLKHSGDKNNELKNFQVSSHSW NNEITTNYDIKYEEKGKSDKENEFFLYSSKIHKVNVKDTINNLRTKICIHCSDTGCCFKD TFGEKIIICGISMGGAIALRLAEYIGQICQEDNLDGFQDKSIVKCLRSRLVCIVLLSPML SLESIKKKTINKIMLPLLPIASYLFPNLQIGSRINNPVCEYITSFSKCDPLYYSKRVKAL MCKSLLNYTDAVRDNLNYYPIDVPLLICHCVHDILTDFEGSESTISYFNQSINQIQQFES TESNIESEFVLWPITCKKMSHILTREIGFQDLIEKILEWVSKKESLHESKCKSLRRSEKN SEPLFKSIKNKPFLRQNLNKNIQVSN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_4080461 SLEWVSKKES0.994unspcgd6_4080461 SLEWVSKKES0.994unspcgd6_4080461 SLEWVSKKES0.994unspcgd6_4080465 SSKKESLHES0.994unspcgd6_4080473 SSKCKSLRRS0.993unspcgd6_4080477 SSLRRSEKNS0.998unspcgd6_408028 STRFQSEKSG0.994unspcgd6_4080198 SEKGKSDKEN0.998unsp

cgd6_4080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India