cgd6_70 | CAAX prenyl protease 1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd6_70OTHER0.9982230.0015870.000191
No Results

  • Fasta :-

    >cgd6_70 MQTIIGNKLVQGIFLINLIKYLLYLYVDLRQKKCYDIKEIPKYILDAYKDCGEVSNEEFK KSQSYSNSKMVFGLISRAVTFVINWLFVFYVIYPLMWEIIYTRISSNEYVSSLLFCGAMM LLDYPISLAFDLYYTFVLEEKYGFNNSTLKIFIMDQIKSGLLVTVFGTILLSVMIYIANN TGKYFYVYIALVQFGFIFIFSIIYPIIIVPIFNKLTPVENQELAEKISKLCKDVNFPLKN LYQMDASLRSNHGNAFFSGAFKSKSIILYDTILDFPQDEIVAIIGHEIGHWKNWDNYKLL FFSFIQTFVTLFIFHLTFSWNGLYLSFGFSLDPKLGGRNLVLSLLVFSYVLGPFSSIVGI LHSIMSQHAEYKADEFSFNLGFGDFLANSLFRLSKKSSSCMIFDPIYSFIHLSHPTVCDR IVSLKKLKDKKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_70.fa Sequence name : cgd6_70 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 3.923 CoefTot : -1.043 ChDiff : 5 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.453 2.712 0.517 1.025 MesoH : 0.972 1.379 0.022 0.579 MuHd_075 : 31.375 33.759 10.851 8.871 MuHd_095 : 17.555 11.146 4.664 3.271 MuHd_100 : 11.806 10.812 3.691 2.751 MuHd_105 : 20.513 22.264 7.942 5.923 Hmax_075 : 21.700 28.400 5.557 9.000 Hmax_095 : 13.900 19.400 2.174 6.150 Hmax_100 : 14.900 17.500 3.585 6.330 Hmax_105 : 17.200 24.150 4.827 7.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2293 0.7707 DFMC : 0.5655 0.4345
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 cgd6_70 MQTIIGNKLVQGIFLINLIKYLLYLYVDLRQKKCYDIKEIPKYILDAYKDCGEVSNEEFKKSQSYSNSKMVFGLISRAVT 80 FVINWLFVFYVIYPLMWEIIYTRISSNEYVSSLLFCGAMMLLDYPISLAFDLYYTFVLEEKYGFNNSTLKIFIMDQIKSG 160 LLVTVFGTILLSVMIYIANNTGKYFYVYIALVQFGFIFIFSIIYPIIIVPIFNKLTPVENQELAEKISKLCKDVNFPLKN 240 LYQMDASLRSNHGNAFFSGAFKSKSIILYDTILDFPQDEIVAIIGHEIGHWKNWDNYKLLFFSFIQTFVTLFIFHLTFSW 320 NGLYLSFGFSLDPKLGGRNLVLSLLVFSYVLGPFSSIVGILHSIMSQHAEYKADEFSFNLGFGDFLANSLFRLSKKSSSC 400 MIFDPIYSFIHLSHPTVCDRIVSLKKLKDKKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd6_70 8 QTIIGNK|LV 0.066 . cgd6_70 20 FLINLIK|YL 0.058 . cgd6_70 30 YLYVDLR|QK 0.068 . cgd6_70 32 YVDLRQK|KC 0.055 . cgd6_70 33 VDLRQKK|CY 0.322 . cgd6_70 38 KKCYDIK|EI 0.068 . cgd6_70 42 DIKEIPK|YI 0.067 . cgd6_70 49 YILDAYK|DC 0.074 . cgd6_70 60 VSNEEFK|KS 0.063 . cgd6_70 61 SNEEFKK|SQ 0.181 . cgd6_70 69 QSYSNSK|MV 0.078 . cgd6_70 77 VFGLISR|AV 0.101 . cgd6_70 103 WEIIYTR|IS 0.086 . cgd6_70 141 TFVLEEK|YG 0.057 . cgd6_70 150 FNNSTLK|IF 0.060 . cgd6_70 158 FIMDQIK|SG 0.064 . cgd6_70 183 IANNTGK|YF 0.083 . cgd6_70 214 IVPIFNK|LT 0.058 . cgd6_70 226 NQELAEK|IS 0.054 . cgd6_70 229 LAEKISK|LC 0.059 . cgd6_70 232 KISKLCK|DV 0.104 . cgd6_70 239 DVNFPLK|NL 0.070 . cgd6_70 249 QMDASLR|SN 0.115 . cgd6_70 262 FFSGAFK|SK 0.104 . cgd6_70 264 SGAFKSK|SI 0.100 . cgd6_70 292 HEIGHWK|NW 0.068 . cgd6_70 298 KNWDNYK|LL 0.069 . cgd6_70 334 GFSLDPK|LG 0.070 . cgd6_70 338 DPKLGGR|NL 0.075 . cgd6_70 372 SQHAEYK|AD 0.077 . cgd6_70 392 LANSLFR|LS 0.088 . cgd6_70 395 SLFRLSK|KS 0.113 . cgd6_70 396 LFRLSKK|SS 0.214 . cgd6_70 420 HPTVCDR|IV 0.105 . cgd6_70 425 DRIVSLK|KL 0.071 . cgd6_70 426 RIVSLKK|LK 0.092 . cgd6_70 428 VSLKKLK|DK 0.067 . cgd6_70 430 LKKLKDK|KN 0.071 . cgd6_70 431 KKLKDKK|N- 0.097 . ____________________________^_________________

  • Fasta :-

    >cgd6_70 ATGCAAACAATAATCGGAAATAAATTAGTTCAGGGAATCTTTCTGATCAACTTAATCAAA TATTTACTTTACTTATACGTTGATCTTAGACAAAAAAAATGTTATGATATCAAAGAGATT CCTAAGTATATATTAGATGCCTACAAAGACTGTGGAGAAGTTTCCAATGAAGAATTTAAG AAGTCCCAATCATACAGCAATTCAAAGATGGTATTTGGACTGATTAGTAGAGCAGTCACT TTTGTTATTAACTGGCTATTTGTTTTTTATGTAATTTATCCATTAATGTGGGAAATTATT TACACAAGAATTAGTTCGAATGAATACGTCTCATCTTTATTATTTTGTGGGGCAATGATG TTATTAGATTATCCTATTAGTCTTGCTTTCGATCTTTACTACACGTTTGTTTTGGAAGAG AAATATGGTTTTAATAACTCAACATTAAAGATATTTATAATGGATCAGATCAAGTCAGGA CTTCTTGTTACTGTATTTGGAACGATTCTGCTTTCTGTAATGATATACATTGCTAATAAT ACAGGTAAATACTTTTATGTATATATTGCTCTAGTACAATTTGGTTTCATATTTATCTTT TCAATAATATATCCAATTATTATTGTCCCTATTTTTAACAAACTCACTCCAGTTGAGAAT CAAGAACTTGCAGAAAAAATCAGTAAACTTTGCAAAGATGTTAATTTCCCGTTAAAGAAT CTATATCAAATGGATGCTTCTCTCAGATCGAATCATGGAAATGCATTCTTTTCAGGTGCA TTCAAATCTAAATCTATTATTTTATATGATACCATTCTTGATTTCCCCCAAGATGAGATA GTTGCAATTATAGGGCATGAAATAGGCCACTGGAAGAACTGGGATAACTACAAACTATTG TTCTTTTCATTTATCCAAACATTTGTAACTCTTTTCATTTTCCACTTAACGTTTTCATGG AATGGACTTTACTTGTCATTTGGTTTCTCTTTAGATCCAAAACTTGGAGGTAGGAATTTA GTTCTATCTCTCCTTGTTTTCTCCTATGTATTGGGTCCTTTCAGCTCAATTGTTGGAATT CTTCATTCTATCATGTCTCAACATGCTGAGTATAAAGCTGATGAGTTTTCATTTAATCTT GGATTTGGGGATTTTCTTGCAAATTCACTGTTTAGACTTTCAAAGAAATCAAGTTCTTGC ATGATATTCGACCCTATTTATAGTTTTATCCACTTATCTCATCCCACTGTATGTGACAGA ATTGTCAGCCTAAAGAAGTTGAAAGATAAAAAAAACTAA
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  • Fasta :-

    MQTIIGNKLVQGIFLINLIKYLLYLYVDLRQKKCYDIKEIPKYILDAYKDCGEVSNEEFK KSQSYSNSKMVFGLISRAVTFVINWLFVFYVIYPLMWEIIYTRISSNEYVSSLLFCGAMM LLDYPISLAFDLYYTFVLEEKYGFNNSTLKIFIMDQIKSGLLVTVFGTILLSVMIYIANN TGKYFYVYIALVQFGFIFIFSIIYPIIIVPIFNKLTPVENQELAEKISKLCKDVNFPLKN LYQMDASLRSNHGNAFFSGAFKSKSIILYDTILDFPQDEIVAIIGHEIGHWKNWDNYKLL FFSFIQTFVTLFIFHLTFSWNGLYLSFGFSLDPKLGGRNLVLSLLVFSYVLGPFSSIVGI LHSIMSQHAEYKADEFSFNLGFGDFLANSLFRLSKKSSSCMIFDPIYSFIHLSHPTVCDR IVSLKKLKDKKN

    No Results
  • title: Zn binding site
  • coordinates: H286,H290,E370,H414
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_70394 SLFRLSKKSS0.997unspcgd6_70394 SLFRLSKKSS0.997unspcgd6_70394 SLFRLSKKSS0.997unspcgd6_7064 SKKSQSYSNS0.993unspcgd6_70105 SYTRISSNEY0.994unsp

cgd6_70      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India