• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
cgd8_600 SP 0.027435 0.972329 0.000236 CS pos: 23-24. VYG-EE. Pr: 0.9066
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No Results
  • Fasta :-

    >cgd8_600 MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMRIAQRFPKHISKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTK TDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETGSSMSSSENFDDFCKTKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd8_600.fa Sequence name : cgd8_600 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 4.437 CoefTot : -0.681 ChDiff : -10 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.600 1.947 0.257 0.774 MesoH : -0.271 0.377 -0.339 0.260 MuHd_075 : 25.949 14.558 7.002 5.033 MuHd_095 : 24.063 20.024 8.410 6.801 MuHd_100 : 22.630 18.966 7.940 6.302 MuHd_105 : 15.634 17.131 6.469 4.947 Hmax_075 : 21.100 20.213 3.882 7.473 Hmax_095 : 19.687 22.300 4.388 8.015 Hmax_100 : 20.500 26.800 5.299 8.520 Hmax_105 : 21.700 22.800 4.738 7.875 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6853 0.3147 DFMC : 0.8437 0.1563
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 cgd8_600 MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGPISVCLHCFMGTISDCSSISK 80 NLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMELLEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMR 160 IAQRFPKHISKLVLDAPPGLLKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL 240 TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVYENCKHRCSKYCKEQFVEDVI 320 KYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTKTDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETG 400 SSMSSSENFDDFCKTKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd8_600 5 --MWLFK|YI 0.085 . cgd8_600 20 AYVGIFK|VY 0.064 . cgd8_600 27 VYGEEQK|VI 0.059 . cgd8_600 40 YFEEGSK|IQ 0.052 . cgd8_600 54 VNYQLHK|EN 0.068 . cgd8_600 80 DCSSISK|NL 0.064 . cgd8_600 84 ISKNLAK|NG 0.071 . cgd8_600 88 LAKNGYR|AL 0.083 . cgd8_600 91 NGYRALR|FD 0.242 . cgd8_600 103 HGLSQYK|NF 0.064 . cgd8_600 123 TMELLEK|LG 0.054 . cgd8_600 145 SSSFIPK|LH 0.071 . cgd8_600 160 GGFVAMR|IA 0.099 . cgd8_600 164 AMRIAQR|FP 0.093 . cgd8_600 167 IAQRFPK|HI 0.233 . cgd8_600 171 FPKHISK|LV 0.085 . cgd8_600 182 APPGLLK|KK 0.053 . cgd8_600 183 PPGLLKK|KV 0.137 . cgd8_600 184 PGLLKKK|VA 0.095 . cgd8_600 226 ENLSSPK|LD 0.064 . cgd8_600 230 SPKLDFR|AK 0.095 . cgd8_600 232 KLDFRAK|HY 0.076 . cgd8_600 236 RAKHYCK|QI 0.060 . cgd8_600 263 IYQEFSK|VD 0.058 . cgd8_600 277 FWGAEDR|LC 0.065 . cgd8_600 296 EYVPNTK|II 0.056 . cgd8_600 304 IVYENCK|HR 0.057 . cgd8_600 306 YENCKHR|CS 0.104 . cgd8_600 309 CKHRCSK|YC 0.201 . cgd8_600 312 RCSKYCK|EQ 0.074 . cgd8_600 321 FVEDVIK|YF 0.078 . cgd8_600 350 IVHSSEK|RS 0.064 . cgd8_600 351 VHSSEKR|SL 0.343 . cgd8_600 357 RSLPSIR|GT 0.104 . cgd8_600 360 PSIRGTK|TD 0.107 . cgd8_600 414 NFDDFCK|TK 0.057 . cgd8_600 416 DDFCKTK|N- 0.068 . ____________________________^_________________
  • Fasta :-

    >cgd8_600 TTAATAGAAAAAAAAAGGGGCAAAATAATTTAATAACTTTTAGTAATAGCAATATGTGGT TATTCAAATACATATTTGCAATCATAAGTTTTGCTTATGTAGGTATCTTCAAAGTTTATG GAGAAGAGCAAAAAGTCATTCCTGACCACTTTTACTTTGAAGAAGGCTCTAAAATCCAAT TATCACATGGAATAGTTAATTATCAATTACATAAAGAAAATGATGATGGACCTATTTCTG TATGTCTTCATTGTTTTATGGGTACAATTTCAGATTGTTCAAGTATTTCAAAGAATTTAG CTAAGAATGGTTATAGAGCTTTAAGATTTGATTTTTATGGGCATGGTTTGTCTCAATATA AAAATTTTGGACAATATTCTGTGGATGATTATGTTGACCAAACAATGGAATTACTTGAGA AATTGGGTCTTTACAATGTAACTGCTATTTCTGAAGAAGAGTTACATTCAAGTAGTTTTA TACCAAAGTTGCATGTAATAGGTACATCTTTGGGTGGATTTGTAGCAATGAGAATTGCTC AAAGATTTCCAAAACATATTAGCAAGTTAGTTTTAGATGCTCCTCCTGGTTTATTGAAGA AGAAAGTTGCACCTTATTTACAATATTCAATCATTAACTATCCATTACAACTTTTTGCCA ATATATACTCACCAGTTTGGGGTTGTTATCAATTTATGGATCCTCCATCTGAGAATCTTT CTTCTCCAAAGCTTGATTTTAGAGCAAAGCACTATTGTAAACAAATACTTTTAACATCTC TACAACTATTTTTGGGAATTAATTTATGGAATAATCAACAAATTTATCAAGAATTTAGTA AAGTCGATGTACCAACTCTTTTTTTCTGGGGAGCTGAAGACAGATTATGCCCACTTTCTT CAGCCATTACTATTCTAAATGAATATGTACCAAACACAAAGATTATTGTTTATGAGAATT GTAAGCATAGATGCTCTAAATATTGTAAAGAACAATTTGTTGAAGATGTTATTAAATACT TTAACAATGAATTAGACCAAGAACTTGTGTCAATGTCACAATATTACAATTCAGTGCATG ATATAGTTCATTCTTCAGAAAAGAGATCACTTCCATCAATTAGAGGTACCAAAACAGATA CTTTATTAGAGCCTAGCTCAATACCTGAAGATACATGTTCAACAAGTACATCTGGTAGTC AAGAAATTGCAGTTCAGTTAGCATCCTCAACTGAAGAAAATACCGAGACTGGGAGTTCTA TGAGTAGTTCAGAAAATTTCGATGATTTTTGTAAAACTAAGAATTAGATAAAGATATGAG TTTAGAAAAAAAAAAAAAAAAAAAAGAAATTACCAATTTCTATCAAAATTTTAATTAGAA AGCTTCTTGCTATGAAAATGGGATATTAATCAATGAATATATTAGAATGAGTGAGAATTG GATGACACTCCTGGGAGTCCTAAATGTTAGCCTGTAATCAGTTATACTTTAATTGGTGTG CTTCATTAAATAGGATTTCCCAATACTGGAGATAGAACAATTACAGTTGAAGGAGTTAAA TTATAAAATATCTCAGAAACCCAAACTCCTTAACTGCTTCAGTAGGAGATAACGTTCTAT TCTTTTATACATTTTATTCAACCAAATTTTACTAGAATTGAAGTATTTTCTAATTAATAT TTATGTTTAACTTAAAAATATATTAATTGAAACTTGATAATATGTGAGCGAAAGCTTTTA CTTCTTAAAAAAACAGAATAAAAGTTCTTATGTTCTCTTGAAAATTTCTATTAATTATAT TTTTCCATAAACTCTTCAAGAATTTGGAAATTTCTGCATGCATGAATACATGCACTAATT TCTGGGAATGCCGCTTTTTCATAAATGACATAATTGTTACGTGTATGTTTAAAAAACAAG AAAAAATTAATTAAACATTATTTACAGAATACTAGAGTAGCA
  • Download Fasta
  • Fasta :-

    MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMRIAQRFPKHISKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTK TDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETGSSMSSSENFDDFCKTKN

    No Results
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ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
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ID
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Position
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Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
cgd8_600 T 379 0.563 0.077 cgd8_600 T 393 0.553 0.054 cgd8_600 T 377 0.552 0.218 cgd8_600 T 363 0.537 0.018 cgd8_600 T 374 0.537 0.032 cgd8_600 T 359 0.530 0.035 cgd8_600 T 361 0.530 0.056 cgd8_600 S 391 0.519 0.029 cgd8_600 S 369 0.504 0.067
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Gscore
Iscore
ID
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Position
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ID
Site
Position
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ID
Site
Position
Gscore
Iscore
cgd8_600 T 379 0.563 0.077 cgd8_600 T 393 0.553 0.054 cgd8_600 T 377 0.552 0.218 cgd8_600 T 363 0.537 0.018 cgd8_600 T 374 0.537 0.032 cgd8_600 T 359 0.530 0.035 cgd8_600 T 361 0.530 0.056 cgd8_600 S 391 0.519 0.029 cgd8_600 S 369 0.504 0.067
Showing 1 to 1 of 1 rows
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ID
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Peptide
Score
Method
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Method
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Peptide
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Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
cgd8_600 392 S QLASSTEEN 0.996 unsp cgd8_600 392 S QLASSTEEN 0.996 unsp cgd8_600 392 S QLASSTEEN 0.996 unsp cgd8_600 402 S ETGSSMSSS 0.992 unsp cgd8_600 404 S GSSMSSSEN 0.996 unsp cgd8_600 405 S SSMSSSENF 0.993 unsp cgd8_600 133 S VTAISEEEL 0.99 unsp cgd8_600 355 S RSLPSIRGT 0.993 unsp
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cgd8_600      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India